| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G152891 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 3 | 3 | 100.00% | 50.00% | 2 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.3864762' Biased in favor of strain: '' |
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| GRMZM2G152891 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.37094 x 10-1 | 23 | 19 | 13 | 9 | 54.76% | 40.91% | 42 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.537094' χ2 p-value for Mo17 x B73: '.3937686' Biased in favor of strain: '' |
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| GRMZM2G152889 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.457786 x 10-1 | 40 | 32 | 19 | 27 | 55.56% | 58.70% | 72 | 46 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3457786' χ2 p-value for Mo17 x B73: '.2381849' Biased in favor of strain: '' |
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| GRMZM2G152889 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.407616 x 10-1 | 34 | 25 | 14 | 48 | 57.63% | 77.42% | 59 | 62 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1407616' χ2 p-value for Mo17 x B73: '.0724861' Biased in favor of strain: '' |
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| GRMZM2G152888 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.572991 x 10-1 | 34 | 7 | 21 | 28 | 82.93% | 57.14% | 41 | 49 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.027202' χ2 p-value for Mo17 x B73: '.1572991' Biased in favor of strain: '' |
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| GRMZM2G152888 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.400846 x 10-1 | 68 | 22 | 49 | 40 | 75.56% | 44.94% | 90 | 89 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.24e-06' χ2 p-value for Mo17 x B73: '.3400846' Biased in favor of strain: '' |
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| GRMZM2G152853 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 344 | 183 | 256 | 256 | 65.28% | 50.00% | 527 | 512 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.33e-12' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G152853 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.31 x 10-5 | 602 | 213 | 369 | 437 | 73.87% | 54.22% | 815 | 806 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000131' χ2 p-value for Mo17 x B73: '6.53e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G152815 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 6 | 0 | 50 | 0.00% | 100.00% | 6 | 50 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '5.73e-07' Biased in favor of strain: '' |
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| GRMZM2G152815 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 11 | 1 | 6 | 0.00% | 85.71% | 11 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009111' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: '' |
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| GRMZM2G152808 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.642 x 10-4 | 530 | 267 | 354 | 268 | 66.50% | 43.09% | 797 | 622 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.21e-20' χ2 p-value for Mo17 x B73: '.0005642' Biased in favor of strain: 'B73' |
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| GRMZM2G152808 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.12 x 10-11 | 579 | 163 | 398 | 432 | 78.03% | 52.05% | 742 | 830 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.12e-11' χ2 p-value for Mo17 x B73: '4.11e-19' Biased in favor of strain: 'B73' |
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| GRMZM2G152796 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 7 | 2 | 6 | 22.22% | 75.00% | 9 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046774' χ2 p-value for Mo17 x B73: '.6170751' Biased in favor of strain: '' |
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| GRMZM2G152796 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.22 x 10-6 | 24 | 1 | 38 | 4 | 96.00% | 9.52% | 25 | 42 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.22e-06' χ2 p-value for Mo17 x B73: '1.55e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G152793 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 1 | 1 | 0.00% | 50.00% | 4 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G152793 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G152781 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G152781 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 1 | 1 | 66.67% | 50.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G152775 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.31668 x 10-1 | 3 | 8 | 10 | 0 | 27.27% | 0.00% | 11 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.131668' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: '' |
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| GRMZM2G152775 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.937685 x 10-1 | 10 | 1 | 5 | 6 | 90.91% | 54.55% | 11 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0880834' χ2 p-value for Mo17 x B73: '.3937685' Biased in favor of strain: '' |
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| GRMZM2G152774 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 9 | 2 | 100.00% | 18.18% | 7 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0613697' χ2 p-value for Mo17 x B73: '.0006467' Biased in favor of strain: '' |
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| GRMZM2G152774 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.495413 x 10-1 | 44 | 8 | 24 | 15 | 84.62% | 38.46% | 52 | 39 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.97e-07' χ2 p-value for Mo17 x B73: '.1495413' Biased in favor of strain: '' |
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| GRMZM2G152768 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.257438 x 10-1 | 605 | 492 | 511 | 473 | 55.15% | 48.07% | 1097 | 984 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006455' χ2 p-value for Mo17 x B73: '.2257438' Biased in favor of strain: '' |
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| GRMZM2G152768 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.82776 x 10-2 | 321 | 132 | 248 | 364 | 70.86% | 59.48% | 453 | 612 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0582776' χ2 p-value for Mo17 x B73: '.0001613' Biased in favor of strain: '' |
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| GRMZM2G152764 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | maternally biased | 0.0 | 7076 | 648 | 1557 | 5862 | 91.61% | 79.01% | 7724 | 7419 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G152764 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.59 x 10-11 | 1621 | 741 | 809 | 1095 | 68.63% | 57.51% | 2362 | 1904 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '5.59e-11' Biased in favor of strain: '' |
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| GRMZM2G152757 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.35846 x 10-2 | 239 | 188 | 218 | 167 | 55.97% | 43.38% | 427 | 385 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0135846' χ2 p-value for Mo17 x B73: '.0093441' Biased in favor of strain: 'B73' |
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| GRMZM2G152757 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.261836 x 10-1 | 144 | 117 | 77 | 156 | 55.17% | 66.95% | 261 | 233 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000817' χ2 p-value for Mo17 x B73: '.9261836' Biased in favor of strain: '' |
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| GRMZM2G152751 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.91 x 10-20 | 452 | 199 | 414 | 190 | 69.43% | 31.46% | 651 | 604 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.55e-23' χ2 p-value for Mo17 x B73: '7.91e-20' Biased in favor of strain: 'B73' |
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| GRMZM2G152751 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.94 x 10-14 | 949 | 289 | 523 | 646 | 76.66% | 55.26% | 1238 | 1169 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.94e-14' χ2 p-value for Mo17 x B73: '1.31e-16' Biased in favor of strain: 'B73' |
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| GRMZM2G152739 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.03 x 10-6 | 63 | 0 | 19 | 6 | 100.00% | 24.00% | 63 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.99e-08' χ2 p-value for Mo17 x B73: '6.03e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G152739 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.3 x 10-29 | 244 | 40 | 201 | 31 | 85.92% | 13.36% | 284 | 232 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.92e-34' χ2 p-value for Mo17 x B73: '6.32e-29' Biased in favor of strain: 'B73' |
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| GRMZM2G152732 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.58217 x 10-2 | 152 | 83 | 143 | 105 | 64.68% | 42.34% | 235 | 248 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.76e-06' χ2 p-value for Mo17 x B73: '.0158217' Biased in favor of strain: 'B73' |
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| GRMZM2G152732 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.230679 x 10-1 | 116 | 47 | 78 | 85 | 71.17% | 52.15% | 163 | 163 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2230679' χ2 p-value for Mo17 x B73: '.0000841' Biased in favor of strain: '' |
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| GRMZM2G152688 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 1 | 1 | 0 | 75.00% | 0.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7236798' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G152688 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G152686 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 5569 | 3063 | 4935 | 2859 | 64.52% | 36.68% | 8632 | 7794 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G152686 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.12 x 10-13 | 9496 | 4155 | 4600 | 6362 | 69.56% | 58.04% | 13651 | 10962 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.12e-13' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G152661 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.096288 x 10-1 | 14 | 30 | 13 | 18 | 31.82% | 58.06% | 44 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.41e-07' χ2 p-value for Mo17 x B73: '.3096288' Biased in favor of strain: '' |
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| GRMZM2G152661 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.763029 x 10-1 | 39 | 23 | 31 | 23 | 62.90% | 42.59% | 62 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0421535' χ2 p-value for Mo17 x B73: '.2763029' Biased in favor of strain: '' |
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| GRMZM2G152655 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.49 x 10-17 | 367 | 172 | 841 | 1336 | 68.09% | 61.37% | 539 | 2177 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.49e-17' χ2 p-value for Mo17 x B73: '2.71e-26' Biased in favor of strain: '' |
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| GRMZM2G152655 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.560002 x 10-1 | 166 | 96 | 799 | 1387 | 63.36% | 63.45% | 262 | 2186 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2560002' χ2 p-value for Mo17 x B73: '.0014172' Biased in favor of strain: '' |
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| GRMZM2G152638 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.529933 x 10-1 | 449 | 302 | 181 | 401 | 59.79% | 68.90% | 751 | 582 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000635' χ2 p-value for Mo17 x B73: '.2529933' Biased in favor of strain: '' |
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| GRMZM2G152638 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.51976 x 10-2 | 357 | 403 | 302 | 477 | 46.97% | 61.23% | 760 | 779 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0951976' χ2 p-value for Mo17 x B73: '3.61e-10' Biased in favor of strain: '' |
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| GRMZM2G152616 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 3 | 0 | 0 | 66.67% | 9 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G152616 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.159304 x 10-1 | 13 | 3 | 11 | 10 | 81.25% | 47.62% | 16 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2159304' χ2 p-value for Mo17 x B73: '.0640775' Biased in favor of strain: '' |
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| GRMZM2G152599 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.49 x 10-18 | 196 | 9 | 77 | 17 | 95.61% | 18.09% | 205 | 94 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.49e-18' χ2 p-value for Mo17 x B73: '1.66e-23' Biased in favor of strain: 'B73' |
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| GRMZM2G152599 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.31 x 10-19 | 159 | 30 | 137 | 24 | 84.13% | 14.91% | 189 | 161 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.39e-21' χ2 p-value for Mo17 x B73: '5.31e-19' Biased in favor of strain: 'B73' |
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| GRMZM2G152591 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 4 | 4 | 4 | 60.00% | 50.00% | 10 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G152591 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G152573 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.911817 x 10-1 | 13 | 4 | 12 | 11 | 76.47% | 47.83% | 17 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3911817' χ2 p-value for Mo17 x B73: '.0552702' Biased in favor of strain: '' |
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| GRMZM2G152573 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.48085 x 10-2 | 16 | 4 | 9 | 2 | 80.00% | 18.18% | 20 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0072904' χ2 p-value for Mo17 x B73: '.0348085' Biased in favor of strain: 'B73' |
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| GRMZM2G152555 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 4 | 0 | 1 | 55.56% | 100.00% | 9 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G152555 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G152552 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.59 x 10-24 | 4294 | 1601 | 2606 | 3680 | 72.84% | 58.54% | 5895 | 6286 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.59e-24' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G152552 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.79 x 10-21 | 3184 | 2110 | 2343 | 1738 | 60.14% | 42.59% | 5294 | 4081 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.79e-21' Biased in favor of strain: 'B73' |
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| GRMZM2G152549 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 2 | 1 | 0 | 60.00% | 0.00% | 5 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G152549 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G152526 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | PEG | 0.0 | 3 | 117 | 129 | 7 | 2.50% | 5.15% | 120 | 136 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G152526 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.263 x 10-4 | 166 | 83 | 118 | 66 | 66.67% | 35.87% | 249 | 184 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.44e-07' χ2 p-value for Mo17 x B73: '.0001263' Biased in favor of strain: 'B73' |
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| GRMZM2G152512 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.697 x 10-4 | 23 | 5 | 19 | 3 | 82.14% | 13.64% | 28 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006697' χ2 p-value for Mo17 x B73: '.0006467' Biased in favor of strain: 'B73' |
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| GRMZM2G152512 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 31 | 0 | 8 | 0 | 100.00% | 0.00% | 31 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000825' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: '' |
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| GRMZM2G152496 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.04 x 10-13 | 0 | 35 | 1 | 107 | 0.00% | 99.07% | 35 | 108 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.93e-17' χ2 p-value for Mo17 x B73: '9.04e-13' Biased in favor of strain: 'Mo17' |
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| GRMZM2G152496 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.76 x 10-13 | 2 | 60 | 2 | 77 | 3.23% | 97.47% | 62 | 79 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.76e-13' χ2 p-value for Mo17 x B73: '3.22e-17' Biased in favor of strain: 'Mo17' |
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| GRMZM2G152485 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.04 x 10-7 | 122 | 51 | 93 | 37 | 70.52% | 28.46% | 173 | 130 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.74e-08' χ2 p-value for Mo17 x B73: '9.04e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G152485 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.7753 x 10-1 | 120 | 47 | 30 | 80 | 71.86% | 72.73% | 167 | 110 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1548521' χ2 p-value for Mo17 x B73: '.17753' Biased in favor of strain: '' |
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| GRMZM2G152477 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.26 x 10-5 | 697 | 254 | 287 | 418 | 73.29% | 59.29% | 951 | 705 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000147' χ2 p-value for Mo17 x B73: '.0000326' Biased in favor of strain: 'B73' |
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| GRMZM2G152477 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.463 x 10-4 | 166 | 33 | 59 | 103 | 83.42% | 63.58% | 199 | 162 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.18e-21' χ2 p-value for Mo17 x B73: '.0005463' Biased in favor of strain: '' |
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| GRMZM2G152470 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.8546 x 10-3 | 247 | 185 | 250 | 141 | 57.18% | 36.06% | 432 | 391 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0028546' χ2 p-value for Mo17 x B73: '3.54e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G152470 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.54 x 10-12 | 234 | 35 | 116 | 55 | 86.99% | 32.16% | 269 | 171 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.54e-12' χ2 p-value for Mo17 x B73: '1.06e-21' Biased in favor of strain: 'B73' |
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| GRMZM2G152466 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 3847 | 533 | 3737 | 2651 | 87.83% | 41.50% | 4380 | 6388 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G152466 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 23165 | 14160 | 21360 | 14350 | 62.06% | 40.18% | 37325 | 35710 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G152461 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.59011 x 10-1 | 35 | 13 | 25 | 36 | 72.92% | 59.02% | 48 | 61 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0014962' χ2 p-value for Mo17 x B73: '.159011' Biased in favor of strain: '' |
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| GRMZM2G152461 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.6731 x 10-3 | 140 | 37 | 84 | 109 | 79.10% | 56.48% | 177 | 193 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004518' χ2 p-value for Mo17 x B73: '.0026731' Biased in favor of strain: 'B73' |
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| GRMZM2G152457 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.008389 x 10-1 | 232 | 122 | 126 | 259 | 65.54% | 67.27% | 354 | 385 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6519331' χ2 p-value for Mo17 x B73: '.8008389' Biased in favor of strain: '' |
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| GRMZM2G152457 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.951081 x 10-1 | 208 | 139 | 185 | 169 | 59.94% | 47.74% | 347 | 354 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002121' χ2 p-value for Mo17 x B73: '.3951081' Biased in favor of strain: '' |
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| GRMZM2G152451 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.05152 x 10-2 | 15 | 0 | 17 | 5 | 100.00% | 22.73% | 15 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001075' χ2 p-value for Mo17 x B73: '.0105152' Biased in favor of strain: 'B73' |
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| GRMZM2G152451 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.89 x 10-4 | 31 | 1 | 51 | 16 | 96.88% | 23.88% | 32 | 67 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000289' χ2 p-value for Mo17 x B73: '1.09e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G152447 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.020499 x 10-1 | 131 | 68 | 80 | 116 | 65.83% | 59.18% | 199 | 196 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8020499' χ2 p-value for Mo17 x B73: '.0262606' Biased in favor of strain: '' |
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| GRMZM2G152447 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.380975 x 10-1 | 54 | 59 | 45 | 98 | 47.79% | 68.53% | 113 | 143 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6380975' χ2 p-value for Mo17 x B73: '9.33e-06' Biased in favor of strain: '' |
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| GRMZM2G152438 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 4 | 2 | 3 | 55.56% | 60.00% | 9 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM2G152438 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 3 | 8 | 100.00% | 72.73% | 3 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.6698155' Biased in favor of strain: '' |
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| GRMZM2G152436 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.780535 x 10-1 | 56 | 29 | 36 | 76 | 65.88% | 67.86% | 85 | 112 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8780535' χ2 p-value for Mo17 x B73: '.7892684' Biased in favor of strain: '' |
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| GRMZM2G152436 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.275985 x 10-1 | 97 | 106 | 56 | 119 | 47.78% | 68.00% | 203 | 175 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5275985' χ2 p-value for Mo17 x B73: '1.91e-06' Biased in favor of strain: '' |
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| GRMZM2G152421 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.616577 x 10-1 | 154 | 101 | 99 | 91 | 60.39% | 47.89% | 255 | 190 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009034' χ2 p-value for Mo17 x B73: '.5616577' Biased in favor of strain: '' |
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| GRMZM2G152421 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.034679 x 10-1 | 95 | 65 | 77 | 183 | 59.38% | 70.38% | 160 | 260 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0503915' χ2 p-value for Mo17 x B73: '.2034679' Biased in favor of strain: '' |
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| GRMZM2G152419 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.22 x 10-8 | 296 | 63 | 94 | 85 | 82.45% | 47.49% | 359 | 179 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.23e-10' χ2 p-value for Mo17 x B73: '5.22e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G152419 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.0 x 10-11 | 155 | 58 | 146 | 43 | 72.77% | 22.75% | 213 | 189 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.00e-11' χ2 p-value for Mo17 x B73: '6.78e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G152417 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2138 | 1067 | 2131 | 1355 | 66.71% | 38.87% | 3205 | 3486 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G152417 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.69 x 10-10 | 2272 | 1608 | 1212 | 3011 | 58.56% | 71.30% | 3880 | 4223 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.51e-27' χ2 p-value for Mo17 x B73: '1.69e-10' Biased in favor of strain: 'Mo17' |
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| GRMZM2G152415 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G152415 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 6 | 0.00% | 100.00% | 2 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G152408 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.769439 x 10-1 | 72 | 83 | 41 | 78 | 46.45% | 65.55% | 155 | 119 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3769439' χ2 p-value for Mo17 x B73: '.0006944' Biased in favor of strain: '' |
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| GRMZM2G152408 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.37713 x 10-2 | 24 | 34 | 27 | 92 | 41.38% | 77.31% | 58 | 119 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000044' χ2 p-value for Mo17 x B73: '.0137713' Biased in favor of strain: '' |
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| GRMZM2G152370 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 4 | 8 | 5 | 55.56% | 38.46% | 9 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4794898' χ2 p-value for Mo17 x B73: '.030984' Biased in favor of strain: '' |
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| GRMZM2G152370 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 1 | 0 | 100.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G152360 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.553463 x 10-1 | 76 | 124 | 88 | 96 | 38.00% | 52.17% | 200 | 184 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006885' χ2 p-value for Mo17 x B73: '.5553463' Biased in favor of strain: '' |
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| GRMZM2G152360 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.03256 x 10-2 | 39 | 44 | 74 | 113 | 46.99% | 60.43% | 83 | 187 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001428' χ2 p-value for Mo17 x B73: '.0703256' Biased in favor of strain: '' |
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| GRMZM2G152328 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.003357 x 10-1 | 81 | 54 | 150 | 168 | 60.00% | 52.83% | 135 | 318 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1003357' χ2 p-value for Mo17 x B73: '1.66e-07' Biased in favor of strain: '' |
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| GRMZM2G152328 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.32667 x 10-2 | 911 | 764 | 969 | 863 | 54.39% | 47.11% | 1675 | 1832 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003284' χ2 p-value for Mo17 x B73: '.0132667' Biased in favor of strain: 'B73' |