Displaying data sets 13601 - 13700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G47370 HAT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.07752 x 10-1 21 1 95.45% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47370 HAT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.983 x 10-3 153 0 100.00% 153 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.42959 x 10-1 136 70 53 137 66.02% 72.11% 206 190 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002019'
Avg. expression score for this sample: '150.149'
Avg. expression score in LCM sample: '121.023'
Tissue used: 'pure endosperm, no chalazal'
AT5G47360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.71 x 10-4 258 81 100 282 76.11% 73.82% 339 382 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002019'
Avg. expression score for this sample: '218.11'
Avg. expression score in LCM sample: '121.023'
Tissue used: 'full endosperm'
AT5G47360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 86 79 25 20 52.12% 44.44% 165 45 TAIR8 Avg. embryo expression (dissected): '111.57'
Avg. embryo expression (LCM): '113.931'
AT5G47360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0032 x 10-2 47 6 88.68% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.56 x 10-4 291 66 81.51% 357 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5 x 10-11 543 85 86.46% 628 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.4 x 10-5 37 1 3 31 97.37% 91.18% 38 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '21.2228'
Avg. expression score in LCM sample: '2.57214'
Tissue used: 'pure endosperm, no chalazal'
AT5G47350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 35 10 8 428 77.78% 98.17% 45 436 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '126.313'
Avg. expression score in LCM sample: '2.57214'
Tissue used: 'full endosperm'
AT5G47350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.9764 x 10-2 7 21 4 2 25.00% 33.33% 28 6 TAIR8 Avg. embryo expression (dissected): '10.3594'
Avg. embryo expression (LCM): '4.3955'
AT5G47350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.102 x 10-3 200 0 100.00% 200 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0 x 10-8 1762 9 99.49% 1771 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.6 x 10-8 1961 11 99.44% 1972 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G47340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.191055'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G47340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Avg. embryo expression (dissected): '.786103'
Avg. embryo expression (LCM): '0'
AT5G47340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 160 0 0 190 100.00% 100.00% 160 190 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '667.342'
Avg. expression score in LCM sample: '2.63093'
Tissue used: 'pure endosperm, no chalazal'
AT5G47330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 139 0 3 226 100.00% 98.69% 139 229 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '361.272'
Avg. expression score in LCM sample: '2.63093'
Tissue used: 'full endosperm'
AT5G47330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.39 x 10-4 15 2 0 12 88.24% 100.00% 17 12 TAIR8 Avg. embryo expression (dissected): '83.1896'
Avg. embryo expression (LCM): '0'
AT5G47330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 95 0 100.00% 95 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1357 5 99.63% 1362 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.16881 x 10-1 1514 5 99.67% 1519 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47320 RPS19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 10 6 6 14 62.50% 70.00% 16 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.760394'
Avg. expression score for this sample: '210.804'
Avg. expression score in LCM sample: '69.7857'
Tissue used: 'pure endosperm, no chalazal'
AT5G47320 RPS19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.00223 x 10-1 23 5 13 22 82.14% 62.86% 28 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.760394'
Avg. expression score for this sample: '208.747'
Avg. expression score in LCM sample: '69.7857'
Tissue used: 'full endosperm'
AT5G47320 RPS19 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 11 15 1 3 42.31% 75.00% 26 4 TAIR8 Avg. embryo expression (dissected): '291.137'
Avg. embryo expression (LCM): '280.27'
AT5G47320 RPS19 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.74571 x 10-1 4 3 57.14% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47320 RPS19 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47320 RPS19 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.282 x 10-3 39 3 92.86% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.1585 x 10-1 148 86 51 144 63.25% 73.85% 234 195 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000462'
Avg. expression score for this sample: '231.73'
Avg. expression score in LCM sample: '254.245'
Tissue used: 'pure endosperm, no chalazal'
AT5G47310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.3 x 10-5 188 69 67 284 73.15% 80.91% 257 351 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000462'
Avg. expression score for this sample: '236.169'
Avg. expression score in LCM sample: '254.245'
Tissue used: 'full endosperm'
AT5G47310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.37804 x 10-1 90 144 26 54 38.46% 67.50% 234 80 TAIR8 Avg. embryo expression (dissected): '250.804'
Avg. embryo expression (LCM): '290.731'
AT5G47310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.8 x 10-6 95 7 93.14% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.6 x 10-15 322 26 92.53% 348 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.6 x 10-16 369 32 92.02% 401 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47306 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G47306 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G47306 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G47306 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47306 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47306 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G47300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.144742'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G47300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G47300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G47290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G47290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G47290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47280 ADR1-L3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.274681'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G47280 ADR1-L3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G47280 ADR1-L3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G47280 ADR1-L3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47280 ADR1-L3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47280 ADR1-L3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.394389'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G47260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.94389 x 10-1 7 2 0 7 77.78% 100.00% 9 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.394389'
Avg. expression score for this sample: '1.23795'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G47260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G47260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.07985 x 10-1 11 4 0 2 73.33% 100.00% 15 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.124321'
Avg. expression score for this sample: '3.31432'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G47250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.80344 x 10-1 15 3 7 24 83.33% 77.42% 18 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.124321'
Avg. expression score for this sample: '7.51628'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G47250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.56983 x 10-1 22 9 3 3 70.97% 50.00% 31 6 TAIR8 Avg. embryo expression (dissected): '12.9334'
Avg. embryo expression (LCM): '10.2101'
AT5G47250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.04 x 10-4 43 0 100.00% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.6 x 10-8 273 4 98.56% 277 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47240 NUDT8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 3 1 1 66.67% 50.00% 9 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.731094'
Avg. expression score for this sample: '2.93814'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G47240 NUDT8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.76471 x 10-1 3 0 1 5 100.00% 83.33% 3 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.731094'
Avg. expression score for this sample: '4.01236'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G47240 NUDT8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 6.08392 x 10-1 5 2 0 0 71.43% 7 0 TAIR8 Avg. embryo expression (dissected): '1.67432'
Avg. embryo expression (LCM): '0'
AT5G47240 NUDT8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47240 NUDT8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.30085 x 10-1 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47240 NUDT8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0689 x 10-2 21 0 100.00% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47230 ERF5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 3 0 0 40.00% 5 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.61265'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G47230 ERF5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.66355 x 10-1 8 4 3 12 66.67% 80.00% 12 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '18.3325'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G47230 ERF5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.23036 x 10-1 14 21 0 4 40.00% 100.00% 35 4 TAIR8 Avg. embryo expression (dissected): '75.0051'
Avg. embryo expression (LCM): '4.21968'
AT5G47230 ERF5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.6994 x 10-2 0 4 0.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47230 ERF5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47230 ERF5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6832 x 10-2 1 5 16.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47229 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G47229 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G47229 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.87304'
Avg. embryo expression (LCM): '0'
AT5G47229 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47229 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47229 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47220 ERF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.35117 x 10-1 7 1 1 2 87.50% 66.67% 8 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.188058'
Avg. expression score for this sample: '5.37898'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G47220 ERF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.5446 x 10-1 61 16 45 98 79.22% 68.53% 77 143 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.188058'
Avg. expression score for this sample: '59.1585'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G47220 ERF2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.8558 x 10-2 79 46 2 0 63.20% 0.00% 125 2 TAIR8 Avg. embryo expression (dissected): '67.6946'
Avg. embryo expression (LCM): '0'
AT5G47220 ERF2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.16872 x 10-1 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47220 ERF2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3 x 10-8 102 3 97.14% 105 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47220 ERF2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.5 x 10-24 368 4 98.92% 372 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.8222 x 10-2 10 18 6 11 35.71% 64.71% 28 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.800631'
Avg. expression score for this sample: '1759.82'
Avg. expression score in LCM sample: '335.01'
Tissue used: 'pure endosperm, no chalazal'
AT5G47210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.12849 x 10-1 84 42 43 100 66.67% 69.93% 126 143 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.800631'
Avg. expression score for this sample: '1101.19'
Avg. expression score in LCM sample: '335.01'
Tissue used: 'full endosperm'