Displaying data sets 136801 - 136900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G62760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '165.394'
Avg. expression score in LCM sample: '1.57268'
Tissue used: 'full endosperm'
AT1G62760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '167.17'
Avg. expression score in LCM sample: '1.57268'
Tissue used: 'pure endosperm, no chalazal'
AT1G62760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '80.0775'
Avg. embryo expression (LCM): '0'
AT1G62750 SCO1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1149.1'
Avg. embryo expression (LCM): '763.323'
AT1G62750 SCO1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62750 SCO1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62750 SCO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '463.366'
Avg. expression score in LCM sample: '293.179'
Tissue used: 'pure endosperm, no chalazal'
AT1G62750 SCO1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62750 SCO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '471.846'
Avg. expression score in LCM sample: '293.179'
Tissue used: 'full endosperm'
AT1G62740 Hop2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.9004 x 10-2 49 27 19 94 64.47% 83.19% 76 113 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014043'
Avg. expression score for this sample: '1145.53'
Avg. expression score in LCM sample: '247.483'
Tissue used: 'full endosperm'
AT1G62740 Hop2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.25105 x 10-1 35 20 24 94 63.64% 79.66% 55 118 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014043'
Avg. expression score for this sample: '894.195'
Avg. expression score in LCM sample: '247.483'
Tissue used: 'pure endosperm, no chalazal'
AT1G62740 Hop2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.09496 x 10-1 94 29 76.42% 123 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62740 Hop2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 29 9 76.32% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62740 Hop2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.54106 x 10-1 141 39 78.33% 180 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62740 Hop2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.33343 x 10-1 41 58 12 18 41.41% 60.00% 99 30 TAIR8 Avg. embryo expression (dissected): '805.111'
Avg. embryo expression (LCM): '596.884'
AT1G62730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '25.736'
Avg. embryo expression (LCM): '33.1798'
AT1G62730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '22.2051'
Avg. expression score in LCM sample: '5.87917'
Tissue used: 'full endosperm'
AT1G62730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '15.942'
Avg. expression score in LCM sample: '5.87917'
Tissue used: 'pure endosperm, no chalazal'
AT1G62720 NG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.35816'
Avg. expression score in LCM sample: '3.63039'
Tissue used: 'pure endosperm, no chalazal'
AT1G62720 NG1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62720 NG1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.62498'
Avg. expression score in LCM sample: '3.63039'
Tissue used: 'full endosperm'
AT1G62720 NG1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62720 NG1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62720 NG1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '10.8029'
Avg. embryo expression (LCM): '17.0797'
AT1G62710 BETA-VPE embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '569.213'
Avg. embryo expression (LCM): '206.739'
AT1G62710 BETA-VPE endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62710 BETA-VPE endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.9966 x 10-2 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62710 BETA-VPE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.23721 x 10-1 27 2 22 3 93.10% 12.00% 29 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.323721'
Avg. expression score for this sample: '1406.2'
Avg. expression score in LCM sample: '106.766'
Tissue used: 'full endosperm'
AT1G62710 BETA-VPE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.323721'
Avg. expression score for this sample: '499.71'
Avg. expression score in LCM sample: '106.766'
Tissue used: 'pure endosperm, no chalazal'
AT1G62710 BETA-VPE endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.82 x 10-3 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62700 ANAC026 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62700 ANAC026 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.4373'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G62700 ANAC026 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.9524'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G62700 ANAC026 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62700 ANAC026 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62700 ANAC026 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '33.8016'
Avg. embryo expression (LCM): '6.37976'
AT1G62690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.09961'
Avg. embryo expression (LCM): '5.56345'
AT1G62690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '2.17529'
Tissue used: 'pure endosperm, no chalazal'
AT1G62690 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.740597'
Avg. expression score in LCM sample: '2.17529'
Tissue used: 'full endosperm'
AT1G62680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.82146 x 10-1 32 23 37 67 58.18% 64.42% 55 104 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.339986'
Avg. expression score for this sample: '27.7192'
Avg. expression score in LCM sample: '11.5085'
Tissue used: 'full endosperm'
AT1G62680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.21949 x 10-1 16 9 22 33 64.00% 60.00% 25 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.339986'
Avg. expression score for this sample: '18.2249'
Avg. expression score in LCM sample: '11.5085'
Tissue used: 'pure endosperm, no chalazal'
AT1G62680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.9 x 10-10 74 3 96.10% 77 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.10454 x 10-1 2 4 33.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.02643 x 10-1 22 11 66.67% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.81524 x 10-1 25 35 12 18 41.67% 60.00% 60 30 TAIR8 Avg. embryo expression (dissected): '30.3728'
Avg. embryo expression (LCM): '24.5771'
AT1G62670 RPF2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.6706 x 10-2 23 55 7 14 29.49% 66.67% 78 21 TAIR8 Avg. embryo expression (dissected): '48.667'
Avg. embryo expression (LCM): '69.7001'
AT1G62670 RPF2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.0 x 10-5 34 1 97.14% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62670 RPF2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.7162 x 10-2 5 8 38.46% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62670 RPF2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.5 x 10-7 64 3 95.52% 67 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62670 RPF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.19214 x 10-1 52 36 19 68 59.09% 78.16% 88 87 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '56.8516'
Avg. expression score in LCM sample: '20.9739'
Tissue used: 'full endosperm'
AT1G62670 RPF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.68883 x 10-1 24 19 10 28 55.81% 73.68% 43 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '34.5712'
Avg. expression score in LCM sample: '20.9739'
Tissue used: 'pure endosperm, no chalazal'
AT1G62660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 4.44444 x 10-1 5 0 0 0 100.00% 5 0 TAIR8 Validated by Sanger sequencing: '+'
Overall p-value after pooling both replicates: '1.3e-13'
Avg. expression score for this sample: '1.27771'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G62660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.6 x 10-15 120 60 66.67% 180 TAIR8 Mutant effect: 'MEG affected by dme'
AT1G62660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 2.6 x 10-13 9 2 0 123 81.82% 100.00% 11 123 TAIR8 Validated by Sanger sequencing: '+'
Overall p-value after pooling both replicates: '1.3e-13'
Avg. expression score for this sample: '16.1182'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G62660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'MEG affected by dme'
AT1G62660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.3 x 10-19 154 94 62.10% 248 TAIR8 Mutant effect: 'MEG affected by dme'
AT1G62660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 2 0 1 0.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '.427409'
Avg. embryo expression (LCM): '0'
AT1G62640 KAS III embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.36 x 10-4 429 632 133 152 40.43% 53.33% 1061 285 TAIR8 Avg. embryo expression (dissected): '279.08'
Avg. embryo expression (LCM): '287.617'
AT1G62640 KAS III endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.9 x 10-8 154 29 84.15% 183 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62640 KAS III endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.39487 x 10-1 77 48 61.60% 125 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62640 KAS III endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.63297 x 10-1 319 137 264 498 69.96% 65.35% 456 762 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.374772'
Avg. expression score for this sample: '116.919'
Avg. expression score in LCM sample: '125.726'
Tissue used: 'full endosperm'
AT1G62640 KAS III endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.02999 x 10-1 253 150 164 277 62.78% 62.81% 403 441 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.374772'
Avg. expression score for this sample: '115.716'
Avg. expression score in LCM sample: '125.726'
Tissue used: 'pure endosperm, no chalazal'
AT1G62640 KAS III endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.23 x 10-4 122 34 78.21% 156 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.98387 x 10-1 7 13 0 13 35.00% 100.00% 20 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.70708'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G62630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 2 0 6 0.00% 100.00% 2 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.90434'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G62630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.34884 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.40169 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 6 4 9 0.00% 69.23% 6 13 TAIR8 Avg. embryo expression (dissected): '10.9485'
Avg. embryo expression (LCM): '3.27779'
AT1G62620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '22.0651'
Avg. embryo expression (LCM): '16.4141'
AT1G62620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '65.0662'
Avg. expression score in LCM sample: '3.20415'
Tissue used: 'pure endosperm, no chalazal'
AT1G62620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '166.46'
Avg. expression score in LCM sample: '3.20415'
Tissue used: 'full endosperm'
AT1G62610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.81095 x 10-1 57 20 14 41 74.03% 74.55% 77 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.044478'
Avg. expression score for this sample: '109.395'
Avg. expression score in LCM sample: '32.5412'
Tissue used: 'full endosperm'
AT1G62610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.25557 x 10-1 38 6 13 29 86.36% 69.05% 44 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.044478'
Avg. expression score for this sample: '98.6163'
Avg. expression score in LCM sample: '32.5412'
Tissue used: 'pure endosperm, no chalazal'
AT1G62610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.76467 x 10-1 141 32 81.50% 173 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 21 6 77.78% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.2 x 10-4 128 15 89.51% 143 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.00076 x 10-1 29 14 10 1 67.44% 9.09% 43 11 TAIR8 Avg. embryo expression (dissected): '106.018'
Avg. embryo expression (LCM): '101.951'
AT1G62600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.91083 x 10-1 50 45 9 10 52.63% 52.63% 95 19 TAIR8 Avg. embryo expression (dissected): '62.3656'
Avg. embryo expression (LCM): '72.463'
AT1G62600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.92409 x 10-1 448 125 78.18% 573 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 23 7 76.67% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.5 x 10-7 449 59 88.39% 508 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.451 x 10-3 98 21 36 119 82.35% 76.77% 119 155 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002451'
Avg. expression score for this sample: '76.2261'
Avg. expression score in LCM sample: '31.8063'
Tissue used: 'full endosperm'
AT1G62600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.63918 x 10-1 68 22 23 41 75.56% 64.06% 90 64 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002451'
Avg. expression score for this sample: '48.7839'
Avg. expression score in LCM sample: '31.8063'
Tissue used: 'pure endosperm, no chalazal'
AT1G62590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 34 0 16 1 100.00% 5.88% 34 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.122621'
Avg. expression score for this sample: '32.2005'
Avg. expression score in LCM sample: '23.9429'
Tissue used: 'pure endosperm, no chalazal'
AT1G62590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.2 x 10-10 101 0 100.00% 101 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G62590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.3857 x 10-2 72 1 19 1 98.63% 5.00% 73 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.122621'
Avg. expression score for this sample: '38.4807'
Avg. expression score in LCM sample: '23.9429'
Tissue used: 'full endosperm'
AT1G62590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.64004 x 10-1 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'