Displaying data sets 136101 - 136200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G63830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1179.79'
Avg. expression score in LCM sample: '290.49'
Tissue used: 'pure endosperm, no chalazal'
AT1G63830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '448.131'
Avg. expression score in LCM sample: '290.49'
Tissue used: 'full endosperm'
AT1G63830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.7 x 10-7 77 10 88.51% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.6135 x 10-2 223 52 234 246 81.09% 51.25% 275 480 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.079302'
Avg. expression score for this sample: '195.196'
Avg. expression score in LCM sample: '239.326'
Tissue used: 'full endosperm'
AT1G63820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.72409 x 10-1 178 85 113 189 67.68% 62.58% 263 302 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.079302'
Avg. expression score for this sample: '246.211'
Avg. expression score in LCM sample: '239.326'
Tissue used: 'pure endosperm, no chalazal'
AT1G63820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.9233 x 10-2 12 1 92.31% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.13281 x 10-1 95 76 22 39 55.56% 63.93% 171 61 TAIR8 Avg. embryo expression (dissected): '162.596'
Avg. embryo expression (LCM): '156.254'
AT1G63820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.623 x 10-3 36 42 46.15% 78 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.50126 x 10-1 17 21 8 9 44.74% 52.94% 38 17 TAIR8 Avg. embryo expression (dissected): '97.8133'
Avg. embryo expression (LCM): '173.685'
AT1G63810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.19282 x 10-1 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.41767 x 10-1 132 53 71.35% 185 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.66128 x 10-1 7 5 5 7 58.33% 58.33% 12 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.903976'
Avg. expression score for this sample: '29.6162'
Avg. expression score in LCM sample: '13.7572'
Tissue used: 'pure endosperm, no chalazal'
AT1G63810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 34 15 28 52 69.39% 65.00% 49 80 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.903976'
Avg. expression score for this sample: '65.7584'
Avg. expression score in LCM sample: '13.7572'
Tissue used: 'full endosperm'
AT1G63810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-5 160 27 85.56% 187 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63800 UBC5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63800 UBC5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1059.29'
Avg. expression score in LCM sample: '153.343'
Tissue used: 'full endosperm'
AT1G63800 UBC5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1057.58'
Avg. expression score in LCM sample: '153.343'
Tissue used: 'pure endosperm, no chalazal'
AT1G63800 UBC5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63800 UBC5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '764.086'
Avg. embryo expression (LCM): '185.377'
AT1G63800 UBC5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G63790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G63790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G63790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63780 IMP4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-4 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63780 IMP4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.37744 x 10-1 3 0 8 2 100.00% 20.00% 3 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.272303'
Avg. expression score for this sample: '36.78'
Avg. expression score in LCM sample: '19.4159'
Tissue used: 'full endosperm'
AT1G63780 IMP4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.272303'
Avg. expression score for this sample: '24.9456'
Avg. expression score in LCM sample: '19.4159'
Tissue used: 'pure endosperm, no chalazal'
AT1G63780 IMP4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 1 1 2 50.00% 66.67% 2 3 TAIR8 Avg. embryo expression (dissected): '57.8511'
Avg. embryo expression (LCM): '101.624'
AT1G63780 IMP4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.4375 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63780 IMP4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.20095 x 10-1 14 9 60.87% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63770 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.06697 x 10-1 113 21 84.33% 134 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63770 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 0.6586 12 18 5 6 40.00% 54.55% 30 11 TAIR8 Avg. embryo expression (dissected): '145.673'
Avg. embryo expression (LCM): '125.623'
AT1G63770 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.69825 x 10-1 16 3 84.21% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.50626 x 10-1 12 12 6 8 50.00% 57.14% 24 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009437'
Avg. expression score for this sample: '125.818'
Avg. expression score in LCM sample: '99.696'
Tissue used: 'pure endosperm, no chalazal'
AT1G63770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.57 x 10-4 42 9 11 83 82.35% 88.30% 51 94 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009437'
Avg. expression score for this sample: '257.661'
Avg. expression score in LCM sample: '99.696'
Tissue used: 'full endosperm'
AT1G63770 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.66 x 10-4 156 11 93.41% 167 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.42424 x 10-1 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 2 0 0 50.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.5671'
Avg. expression score for this sample: '2.41713'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G63750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.5671'
Avg. expression score for this sample: '.887781'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G63750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.28571 x 10-1 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 3 0 2 40.00% 100.00% 5 2 TAIR8 Avg. embryo expression (dissected): '5.67457'
Avg. embryo expression (LCM): '0'
AT1G63740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 3 0 0 50.00% 6 0 TAIR8 Avg. embryo expression (dissected): '13.6029'
Avg. embryo expression (LCM): '11.6418'
AT1G63740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.3461 x 10-2 8 3 72.73% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.44444 x 10-1 2 0 0 3 100.00% 100.00% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.021073'
Avg. expression score for this sample: '5.42822'
Avg. expression score in LCM sample: '6.3495'
Tissue used: 'pure endosperm, no chalazal'
AT1G63740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.10526 x 10-1 5 0 0 5 100.00% 100.00% 5 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.021073'
Avg. expression score for this sample: '17.1281'
Avg. expression score in LCM sample: '6.3495'
Tissue used: 'full endosperm'
AT1G63740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.82759 x 10-1 13 1 92.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.61 x 10-4 31 2 93.94% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.67193 x 10-1 26 5 9 11 83.87% 55.00% 31 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.863887'
Avg. expression score for this sample: '16.6614'
Avg. expression score in LCM sample: '11.6701'
Tissue used: 'full endosperm'
AT1G63730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.44315 x 10-1 6 5 8 5 54.55% 38.46% 11 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.863887'
Avg. expression score for this sample: '7.76111'
Avg. expression score in LCM sample: '11.6701'
Tissue used: 'pure endosperm, no chalazal'
AT1G63730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.2998 x 10-1 33 11 75.00% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 15 10 5 1 60.00% 16.67% 25 6 TAIR8 Avg. embryo expression (dissected): '16.3969'
Avg. embryo expression (LCM): '13.0107'
AT1G63730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.58939 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63720 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63720 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '7.45405'
Avg. embryo expression (LCM): '1.64517'
AT1G63720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '14.7565'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G63720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '43.2444'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G63720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63710 CYP86A7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63710 CYP86A7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G63710 CYP86A7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.14536'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G63710 CYP86A7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G63710 CYP86A7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63710 CYP86A7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63700 YDA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.88756 x 10-1 5 6 45.45% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63700 YDA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.9789 x 10-2 36 1 11 0 97.30% 0.00% 37 11 TAIR8 Avg. embryo expression (dissected): '122.278'
Avg. embryo expression (LCM): '94.654'
AT1G63700 YDA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.57 x 10-4 2 11 15.38% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63700 YDA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.25023 x 10-1 52 0 22 1 100.00% 4.35% 52 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.924057'
Avg. expression score for this sample: '107.356'
Avg. expression score in LCM sample: '77.458'
Tissue used: 'pure endosperm, no chalazal'
AT1G63700 YDA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 107 4 55 8 96.40% 12.70% 111 63 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.924057'
Avg. expression score for this sample: '159.543'
Avg. expression score in LCM sample: '77.458'
Tissue used: 'full endosperm'
AT1G63700 YDA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.2 x 10-14 110 1 99.10% 111 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63690 SPPL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2221 114 95.12% 2335 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT1G63690 SPPL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 0.0 960 205 279 1485 82.40% 84.18% 1165 1764 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '812.002'
Avg. expression score in LCM sample: '312.022'
Tissue used: 'full endosperm'
AT1G63690 SPPL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 3.3019 x 10-2 208 80 75 205 72.22% 73.21% 288 280 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '335.821'
Avg. expression score in LCM sample: '312.022'
Tissue used: 'pure endosperm, no chalazal'
AT1G63690 SPPL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.3882 x 10-2 241 34 87.64% 275 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT1G63690 SPPL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 895 12 98.68% 907 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT1G63690 SPPL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 96 97 38 38 49.74% 50.00% 193 76 TAIR8 Avg. embryo expression (dissected): '268.07'
Avg. embryo expression (LCM): '166.627'
AT1G63680 MURE embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.22393 x 10-1 8 6 0 2 57.14% 100.00% 14 2 TAIR8 Avg. embryo expression (dissected): '720.479'
Avg. embryo expression (LCM): '582.542'
AT1G63680 MURE endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63680 MURE endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63680 MURE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 2 0 100.00% 0.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.733222'
Avg. expression score for this sample: '163.902'
Avg. expression score in LCM sample: '86.6442'
Tissue used: 'pure endosperm, no chalazal'
AT1G63680 MURE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 6 6 100.00% 50.00% 2 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.733222'
Avg. expression score for this sample: '211.637'
Avg. expression score in LCM sample: '86.6442'
Tissue used: 'full endosperm'
AT1G63680 MURE endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.4836 x 10-2 12 1 92.31% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63670 TRM12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 617 18 97.17% 635 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63670 TRM12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.96 x 10-4 173 44 64 180 79.72% 73.77% 217 244 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004213'
Avg. expression score for this sample: '46.8441'
Avg. expression score in LCM sample: '6.77574'
Tissue used: 'full endosperm'
AT1G63670 TRM12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.71578 x 10-1 30 13 17 25 69.77% 59.52% 43 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004213'
Avg. expression score for this sample: '12.8543'
Avg. expression score in LCM sample: '6.77574'
Tissue used: 'pure endosperm, no chalazal'
AT1G63670 TRM12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.7 x 10-15 183 4 97.86% 187 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63670 TRM12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.61737 x 10-1 74 132 16 47 35.92% 74.60% 206 63 TAIR8 Avg. embryo expression (dissected): '50.6921'
Avg. embryo expression (LCM): '46.8937'
AT1G63670 TRM12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.4126 x 10-2 29 3 90.62% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 20 7 74.07% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.40565 x 10-1 246 72 77.36% 318 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G63660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.89885 x 10-1 77 80 16 28 49.04% 63.64% 157 44 TAIR8 Avg. embryo expression (dissected): '140.777'
Avg. embryo expression (LCM): '275.899'
AT1G63660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 35 12 15 21 74.47% 58.33% 47 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.280042'
Avg. expression score for this sample: '46.9614'
Avg. expression score in LCM sample: '70.065'
Tissue used: 'pure endosperm, no chalazal'
AT1G63660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.2102 x 10-1 27 15 27 91 64.29% 77.12% 42 118 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.280042'
Avg. expression score for this sample: '44.645'
Avg. expression score in LCM sample: '70.065'
Tissue used: 'full endosperm'
AT1G63660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.96959 x 10-1 211 77 73.26% 288 TAIR8 Mutant effect: 'N/A (not a MEG)'