GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G153675	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	1	100.00%	100.00%	1	1	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G153675	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.8924 x 10^-3	90	28	69	39	76.27%	36.11%	118	108	RefGen V2	χ2 p-value for B73 x Mo17: '1.15e-08' χ2 p-value for Mo17 x B73: '.0038924' Biased in favor of strain: 'B73'
GRMZM2G153648	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.5 x 10^-6	129	56	87	35	69.73%	28.69%	185	122	RefGen V2	χ2 p-value for B73 x Mo17: '8.00e-08' χ2 p-value for Mo17 x B73: '2.50e-06' Biased in favor of strain: 'B73'
GRMZM2G153648	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.175342 x 10^-1	67	23	38	43	74.44%	53.09%	90	81	RefGen V2	χ2 p-value for B73 x Mo17: '.1175342' χ2 p-value for Mo17 x B73: '.0095219' Biased in favor of strain: ''
GRMZM2G153627	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.51716 x 10^-2	27	26	35	29	50.94%	45.31%	53	64	RefGen V2	χ2 p-value for B73 x Mo17: '.0151716' χ2 p-value for Mo17 x B73: '.0002902' Biased in favor of strain: ''
GRMZM2G153627	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.270892 x 10^-1	22	18	12	9	55.00%	42.86%	40	21	RefGen V2	χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.5126908' Biased in favor of strain: ''
GRMZM2G153615	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.2 x 10^-14	1313	799	1251	897	62.17%	41.76%	2112	2148	RefGen V2	χ2 p-value for B73 x Mo17: '4.86e-29' χ2 p-value for Mo17 x B73: '2.20e-14' Biased in favor of strain: 'B73'
GRMZM2G153615	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.94045 x 10^-2	936	355	464	810	72.50%	63.58%	1291	1274	RefGen V2	χ2 p-value for B73 x Mo17: '8.69e-06' χ2 p-value for Mo17 x B73: '.0194045' Biased in favor of strain: ''
GRMZM2G153594	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	1	5	6	80.00%	54.55%	5	11	RefGen V2	χ2 p-value for B73 x Mo17: '.5270948' χ2 p-value for Mo17 x B73: '.3937685' Biased in favor of strain: ''
GRMZM2G153594	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	0	2	1	100.00%	33.33%	6	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G153586	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.281241 x 10^-1	69	60	92	30	53.49%	24.59%	129	122	RefGen V2	χ2 p-value for B73 x Mo17: '.4281241' χ2 p-value for Mo17 x B73: '1.99e-08' Biased in favor of strain: ''
GRMZM2G153586	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	5	3		37.50%	0	8	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G153582	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	3.972 x 10^-4	31	36	37	30	46.27%	44.78%	67	67	RefGen V2	χ2 p-value for B73 x Mo17: '.0003972' χ2 p-value for Mo17 x B73: '.0001441' Biased in favor of strain: ''
GRMZM2G153582	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.009907 x 10^-1	121	113	96	87	51.71%	47.54%	234	183	RefGen V2	χ2 p-value for B73 x Mo17: '.6009907' χ2 p-value for Mo17 x B73: '.5058592' Biased in favor of strain: ''
GRMZM2G153575	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.59 x 10^-14	499	165	310	146	75.15%	32.02%	664	456	RefGen V2	χ2 p-value for B73 x Mo17: '2.02e-38' χ2 p-value for Mo17 x B73: '1.59e-14' Biased in favor of strain: 'B73'
GRMZM2G153575	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.46 x 10^-6	164	35	106	55	82.41%	34.16%	199	161	RefGen V2	χ2 p-value for B73 x Mo17: '2.46e-06' χ2 p-value for Mo17 x B73: '2.15e-18' Biased in favor of strain: 'B73'
GRMZM2G153569	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1578	165	825	342	90.53%	29.31%	1743	1167	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G153569	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1066	366	969	399	74.44%	29.17%	1432	1368	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G153541	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.37 x 10^-5	6681	7232	6386	6887	48.02%	51.89%	13913	13273	RefGen V2	χ2 p-value for B73 x Mo17: '2.99e-06' χ2 p-value for Mo17 x B73: '.0000137' Biased in favor of strain: 'Mo17'
GRMZM2G153541	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	14927	6166	8647	12717	70.77%	59.53%	21093	21364	RefGen V2	χ2 p-value for B73 x Mo17: '1.38e-36' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G153536	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		39	0	9	0	100.00%	0.00%	39	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0000101' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: ''
GRMZM2G153536	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.08 x 10^-7	89	34	111	43	72.36%	27.92%	123	154	RefGen V2	χ2 p-value for B73 x Mo17: '7.08e-07' χ2 p-value for Mo17 x B73: '4.26e-08' Biased in favor of strain: 'B73'
GRMZM2G153527	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.77078 x 10^-2	21	4	35	56	84.00%	61.54%	25	91	RefGen V2	χ2 p-value for B73 x Mo17: '.0006739' χ2 p-value for Mo17 x B73: '.0277078' Biased in favor of strain: ''
GRMZM2G153527	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.99984 x 10^-1	8	4	28	30	66.67%	51.72%	12	58	RefGen V2	χ2 p-value for B73 x Mo17: '.999984' χ2 p-value for Mo17 x B73: '.0157767' Biased in favor of strain: ''
GRMZM2G153523	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	1	16	19	88.89%	54.29%	9	35	RefGen V2	χ2 p-value for B73 x Mo17: '.157302' χ2 p-value for Mo17 x B73: '.1202327' Biased in favor of strain: ''
GRMZM2G153523	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.92 x 10^-21	734	340	423	190	68.34%	31.00%	1074	613	RefGen V2	χ2 p-value for B73 x Mo17: '2.71e-33' χ2 p-value for Mo17 x B73: '4.92e-21' Biased in favor of strain: 'B73'
GRMZM2G153456	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.5784 x 10^-3	39	17	27	51	69.64%	65.38%	56	78	RefGen V2	χ2 p-value for B73 x Mo17: '.0032835' χ2 p-value for Mo17 x B73: '.0065784' Biased in favor of strain: ''
GRMZM2G153456	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.18 x 10^-6	301	39	112	123	88.53%	52.34%	340	235	RefGen V2	χ2 p-value for B73 x Mo17: '1.21e-17' χ2 p-value for Mo17 x B73: '3.18e-06' Biased in favor of strain: 'B73'
GRMZM2G153454	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.01 x 10^-7	712	244	401	361	74.48%	47.38%	956	762	RefGen V2	χ2 p-value for B73 x Mo17: '3.01e-07' χ2 p-value for Mo17 x B73: '1.36e-29' Biased in favor of strain: 'B73'
GRMZM2G153454	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.66685 x 10^-2	670	515	584	505	56.54%	46.37%	1185	1089	RefGen V2	χ2 p-value for B73 x Mo17: '6.71e-06' χ2 p-value for Mo17 x B73: '.0166685' Biased in favor of strain: 'B73'
GRMZM2G153445	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	234	0	259	0	100.00%	0.00%	234	259	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G153445	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.33 x 10^-28	240	0	111	0	100.00%	0.00%	240	111	RefGen V2	χ2 p-value for B73 x Mo17: '6.33e-28' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G153434	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.385 x 10^-4	2	10	0	94	16.67%	100.00%	12	94	RefGen V2	χ2 p-value for B73 x Mo17: '.0002385' χ2 p-value for Mo17 x B73: '7.10e-12' Biased in favor of strain: 'Mo17'
GRMZM2G153434	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.637029 x 10^-1	145	116	77	70	55.56%	47.62%	261	147	RefGen V2	χ2 p-value for B73 x Mo17: '.0726449' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G153409	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.68 x 10^-7	302	140	204	116	68.33%	36.25%	442	320	RefGen V2	χ2 p-value for B73 x Mo17: '1.30e-14' χ2 p-value for Mo17 x B73: '8.68e-07' Biased in favor of strain: 'B73'
GRMZM2G153409	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.51 x 10^-27	547	82	354	250	86.96%	41.39%	629	604	RefGen V2	χ2 p-value for B73 x Mo17: '3.51e-27' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G153393	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.24 x 10^-5	179	30	86	92	85.65%	51.69%	209	178	RefGen V2	χ2 p-value for B73 x Mo17: '5.87e-09' χ2 p-value for Mo17 x B73: '.0000224' Biased in favor of strain: 'B73'
GRMZM2G153393	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.35 x 10^-8	247	140	237	119	63.82%	33.43%	387	356	RefGen V2	χ2 p-value for B73 x Mo17: '5.35e-08' χ2 p-value for Mo17 x B73: '4.00e-10' Biased in favor of strain: 'B73'
GRMZM2G153378	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.922 x 10^-4	143	89	124	63	61.64%	33.69%	232	187	RefGen V2	χ2 p-value for B73 x Mo17: '.0003922' χ2 p-value for Mo17 x B73: '8.17e-06' Biased in favor of strain: 'B73'
GRMZM2G153378	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.96215 x 10^-1	95	37	59	74	71.97%	55.64%	132	133	RefGen V2	χ2 p-value for B73 x Mo17: '.196215' χ2 p-value for Mo17 x B73: '.0069796' Biased in favor of strain: ''
GRMZM2G153369	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.478976 x 10^-1	85	31	42	79	73.28%	65.29%	116	121	RefGen V2	χ2 p-value for B73 x Mo17: '.1310491' χ2 p-value for Mo17 x B73: '.7478976' Biased in favor of strain: ''
GRMZM2G153369	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.039	30	16	33	16	65.22%	32.65%	46	49	RefGen V2	χ2 p-value for B73 x Mo17: '.039' χ2 p-value for Mo17 x B73: '.0151584' Biased in favor of strain: 'B73'
GRMZM2G153333	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.855405 x 10^-1	1942	1327	1057	997	59.41%	48.54%	3269	2054	RefGen V2	χ2 p-value for B73 x Mo17: '5.53e-27' χ2 p-value for Mo17 x B73: '.1855405' Biased in favor of strain: ''
GRMZM2G153333	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3619	1186	2187	2742	75.32%	55.63%	4805	4929	RefGen V2	χ2 p-value for B73 x Mo17: '4.57e-37' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G153292	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	10130	3013	6236	6002	77.08%	49.04%	13143	12238	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G153292	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	8570	3837	8373	4703	69.07%	35.97%	12407	13076	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G153275	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.448816 x 10^-1	44	41	37	32	51.76%	46.38%	85	69	RefGen V2	χ2 p-value for B73 x Mo17: '.7448816' χ2 p-value for Mo17 x B73: '.5472212' Biased in favor of strain: ''
GRMZM2G153275	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.23523 x 10^-2	8	20	5	23	28.57%	82.14%	28	28	RefGen V2	χ2 p-value for B73 x Mo17: '.000019' χ2 p-value for Mo17 x B73: '.0823523' Biased in favor of strain: ''
GRMZM2G153274	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.77 x 10^-9	541	158	369	462	77.40%	55.60%	699	831	RefGen V2	χ2 p-value for B73 x Mo17: '1.77e-09' χ2 p-value for Mo17 x B73: '1.29e-11' Biased in favor of strain: 'B73'
GRMZM2G153274	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.400846 x 10^-1	262	126	187	169	67.53%	47.47%	388	356	RefGen V2	χ2 p-value for B73 x Mo17: '5.04e-12' χ2 p-value for Mo17 x B73: '.3400846' Biased in favor of strain: ''
GRMZM2G153250	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.373519 x 10^-1	10	8	2	12	55.56%	85.71%	18	14	RefGen V2	χ2 p-value for B73 x Mo17: '.6373519' χ2 p-value for Mo17 x B73: '.0075263' Biased in favor of strain: ''
GRMZM2G153250	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	3	5	83.33%	62.50%	6	8	RefGen V2	χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.8025872' Biased in favor of strain: ''
GRMZM2G153215	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.77427 x 10^-2	266	106	230	310	71.51%	57.41%	372	540	RefGen V2	χ2 p-value for B73 x Mo17: '.0477427' χ2 p-value for Mo17 x B73: '5.01e-06' Biased in favor of strain: ''
GRMZM2G153215	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.02 x 10^-22	851	427	712	390	66.59%	35.39%	1278	1102	RefGen V2	χ2 p-value for B73 x Mo17: '1.90e-32' χ2 p-value for Mo17 x B73: '3.02e-22' Biased in favor of strain: 'B73'
GRMZM2G153208	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		12	0	6	2	100.00%	25.00%	12	8	RefGen V2	χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G153208	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	0	2	83.33%	100.00%	6	2	RefGen V2	χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G153206	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.01 x 10^-13	1137	797	979	3219	58.79%	76.68%	1934	4198	RefGen V2	χ2 p-value for B73 x Mo17: '2.01e-13' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17'
GRMZM2G153206	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.34 x 10^-15	3124	2231	2512	1981	58.34%	44.09%	5355	4493	RefGen V2	χ2 p-value for B73 x Mo17: '2.99e-34' χ2 p-value for Mo17 x B73: '2.34e-15' Biased in favor of strain: 'B73'
GRMZM2G153181	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.59 x 10^-16	2501	1780	2204	1695	58.42%	43.47%	4281	3899	RefGen V2	χ2 p-value for B73 x Mo17: '3.08e-28' χ2 p-value for Mo17 x B73: '3.59e-16' Biased in favor of strain: 'B73'
GRMZM2G153181	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.62 x 10^-28	2574	830	1424	1876	75.62%	56.85%	3404	3300	RefGen V2	χ2 p-value for B73 x Mo17: '1.62e-28' χ2 p-value for Mo17 x B73: '5.45e-33' Biased in favor of strain: 'B73'
GRMZM2G153162	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.712833 x 10^-1	313	136	355	404	69.71%	53.23%	449	759	RefGen V2	χ2 p-value for B73 x Mo17: '.1712833' χ2 p-value for Mo17 x B73: '4.03e-15' Biased in favor of strain: ''
GRMZM2G153162	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.155 x 10^-4	334	225	249	179	59.75%	41.82%	559	428	RefGen V2	χ2 p-value for B73 x Mo17: '4.02e-06' χ2 p-value for Mo17 x B73: '.0007155' Biased in favor of strain: 'B73'
GRMZM2G153152	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	2	2	1	81.82%	33.33%	11	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0348085' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G153152	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	1	1	0.00%	50.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: ''
GRMZM2G153150	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.896775 x 10^-1	83	74	60	101	52.87%	62.73%	157	161	RefGen V2	χ2 p-value for B73 x Mo17: '.0002442' χ2 p-value for Mo17 x B73: '.2896775' Biased in favor of strain: ''
GRMZM2G153150	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.516796 x 10^-1	70	119	76	67	37.04%	46.85%	189	143	RefGen V2	χ2 p-value for B73 x Mo17: '.0003649' χ2 p-value for Mo17 x B73: '.4516796' Biased in favor of strain: ''
GRMZM2G153138	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.28086 x 10^-2	756	672	564	638	52.94%	53.08%	1428	1202	RefGen V2	χ2 p-value for B73 x Mo17: '.0262242' χ2 p-value for Mo17 x B73: '.0328086' Biased in favor of strain: ''
GRMZM2G153138	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	1.393 x 10^-4	794	505	551	897	61.12%	61.95%	1299	1448	RefGen V2	χ2 p-value for B73 x Mo17: '.0000226' χ2 p-value for Mo17 x B73: '.0001393' Biased in favor of strain: ''
GRMZM2G153127	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	2	100.00%	100.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G153127	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	340	53	320	63	86.51%	16.45%	393	383	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G153103	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	3	10	2	50.00%	16.67%	6	12	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0209213' Biased in favor of strain: ''
GRMZM2G153103	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.33283 x 10^-2	24	0	10	6	100.00%	37.50%	24	16	RefGen V2	χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0133283' Biased in favor of strain: ''
GRMZM2G153096	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.62 x 10^-6	46	0	13	0	100.00%	0.00%	46	13	RefGen V2	χ2 p-value for B73 x Mo17: '1.62e-06' χ2 p-value for Mo17 x B73: '3.41e-07' Biased in favor of strain: 'B73'
GRMZM2G153096	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	2	0	100.00%	0.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G153087	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.973948 x 10^-1	190	177	130	230	51.77%	63.89%	367	360	RefGen V2	χ2 p-value for B73 x Mo17: '.4973948' χ2 p-value for Mo17 x B73: '1.36e-07' Biased in favor of strain: ''
GRMZM2G153087	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.04 x 10^-13	544	135	319	260	80.12%	44.91%	679	579	RefGen V2	χ2 p-value for B73 x Mo17: '1.04e-13' χ2 p-value for Mo17 x B73: '1.15e-28' Biased in favor of strain: 'B73'
GRMZM2G153068	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.42 x 10^-8	206	41	95	84	83.40%	46.93%	247	179	RefGen V2	χ2 p-value for B73 x Mo17: '2.42e-08' χ2 p-value for Mo17 x B73: '2.12e-08' Biased in favor of strain: 'B73'
GRMZM2G153068	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.421 x 10^-4	161	73	132	77	68.80%	36.84%	234	209	RefGen V2	χ2 p-value for B73 x Mo17: '8.78e-09' χ2 p-value for Mo17 x B73: '.0001421' Biased in favor of strain: 'B73'
GRMZM2G153017	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.937 x 10^-4	184	122	234	126	60.13%	35.00%	306	360	RefGen V2	χ2 p-value for B73 x Mo17: '.0003937' χ2 p-value for Mo17 x B73: '1.25e-08' Biased in favor of strain: 'B73'
GRMZM2G153017	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.81 x 10^-10	313	71	183	175	81.51%	48.88%	384	358	RefGen V2	χ2 p-value for B73 x Mo17: '6.81e-10' χ2 p-value for Mo17 x B73: '9.47e-13' Biased in favor of strain: 'B73'
GRMZM2G152984	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.358698 x 10^-1	314	172	184	270	64.61%	59.47%	486	454	RefGen V2	χ2 p-value for B73 x Mo17: '.3358698' χ2 p-value for Mo17 x B73: '.001145' Biased in favor of strain: ''
GRMZM2G152984	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.494 x 10^-4	406	280	271	198	59.18%	42.22%	686	469	RefGen V2	χ2 p-value for B73 x Mo17: '1.50e-06' χ2 p-value for Mo17 x B73: '.0007494' Biased in favor of strain: 'B73'
GRMZM2G152981	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.040842 x 10^-1	36	26	11	38	58.06%	77.55%	62	49	RefGen V2	χ2 p-value for B73 x Mo17: '.2040842' χ2 p-value for Mo17 x B73: '.0001147' Biased in favor of strain: ''
GRMZM2G152981	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.468 x 10^-4	82	17	25	11	82.83%	30.56%	99	36	RefGen V2	χ2 p-value for B73 x Mo17: '.0006468' χ2 p-value for Mo17 x B73: '4.30e-06' Biased in favor of strain: 'B73'
GRMZM2G152958	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G152958	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	2	0	1	33.33%	100.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G152955	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.63773 x 10^-2	7	26	5	16	21.21%	76.19%	33	21	RefGen V2	χ2 p-value for B73 x Mo17: '.0009414' χ2 p-value for Mo17 x B73: '.0163773' Biased in favor of strain: 'Mo17'
GRMZM2G152955	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.041557 x 10^-1	17	15	9	8	53.12%	47.06%	32	17	RefGen V2	χ2 p-value for B73 x Mo17: '.1041557' χ2 p-value for Mo17 x B73: '.0863478' Biased in favor of strain: ''
GRMZM2G152952	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	2	0.00%	100.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G152952	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G152921	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.98 x 10^-6	20	77	18	60	20.62%	76.92%	97	78	RefGen V2	χ2 p-value for B73 x Mo17: '7.15e-09' χ2 p-value for Mo17 x B73: '1.98e-06' Biased in favor of strain: 'Mo17'
GRMZM2G152921	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.16 x 10^-15	23	81	24	225	22.12%	90.36%	104	249	RefGen V2	χ2 p-value for B73 x Mo17: '5.53e-22' χ2 p-value for Mo17 x B73: '2.16e-15' Biased in favor of strain: 'Mo17'
GRMZM2G152919	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.42481 x 10^-2	80	22	33	37	78.43%	52.86%	102	70	RefGen V2	χ2 p-value for B73 x Mo17: '.01172' χ2 p-value for Mo17 x B73: '.0142481' Biased in favor of strain: ''
GRMZM2G152919	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.36 x 10^-5	108	27	76	31	80.00%	28.97%	135	107	RefGen V2	χ2 p-value for B73 x Mo17: '3.14e-12' χ2 p-value for Mo17 x B73: '.0000136' Biased in favor of strain: 'B73'
GRMZM2G152908	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	39882	20082	47045	23960	66.51%	33.74%	59964	71005	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G152908	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	5215	1520	4061	3967	77.43%	49.41%	6735	8028	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G152901	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.828939 x 10^-1	74	57	82	189	56.49%	69.74%	131	271	RefGen V2	χ2 p-value for B73 x Mo17: '.0134634' χ2 p-value for Mo17 x B73: '.2828939' Biased in favor of strain: ''
GRMZM2G152901	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.373519 x 10^-1	8	10	3	11	44.44%	78.57%	18	14	RefGen V2	χ2 p-value for B73 x Mo17: '.6373519' χ2 p-value for Mo17 x B73: '.0325094' Biased in favor of strain: ''
GRMZM2G152895	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.16 x 10^-16	156	26	141	32	85.71%	18.50%	182	173	RefGen V2	χ2 p-value for B73 x Mo17: '5.62e-22' χ2 p-value for Mo17 x B73: '1.16e-16' Biased in favor of strain: 'B73'
GRMZM2G152895	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.993867 x 10^-1	40	35	35	56	53.33%	61.54%	75	91	RefGen V2	χ2 p-value for B73 x Mo17: '.0143039' χ2 p-value for Mo17 x B73: '.2993867' Biased in favor of strain: ''

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