| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G64295 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.343533' Avg. expression score in LCM sample: '4.52696' Tissue used: 'full endosperm' |
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| AT1G64295 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT1G64295 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64295 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64290 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.50473 x 10-1 | 36 | 25 | 59.02% | 61 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64290 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.5703 x 10-1 | 108 | 49 | 68.79% | 157 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64290 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64290 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.13655' Avg. embryo expression (LCM): '0' |
||||||
| AT1G64290 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 2 | 0 | 2 | 33.33% | 100.00% | 3 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '9.47027' Avg. expression score in LCM sample: '46.0045' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64290 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 1 | 0 | 6 | 0.00% | 100.00% | 1 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '6.00675' Avg. expression score in LCM sample: '46.0045' Tissue used: 'full endosperm' |
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| AT1G64280 | NPR1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.1552 x 10-1 | 91 | 20 | 33 | 23 | 81.98% | 41.07% | 111 | 56 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.635556' Avg. expression score for this sample: '26.536' Avg. expression score in LCM sample: '9.92109' Tissue used: 'full endosperm' |
||||
| AT1G64280 | NPR1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.4336 x 10-2 | 40 | 11 | 6 | 2 | 78.43% | 25.00% | 51 | 8 | TAIR8 |
Avg. embryo expression (dissected): '28.4997' Avg. embryo expression (LCM): '15.962' |
|||
| AT1G64280 | NPR1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.45176 x 10-1 | 38 | 8 | 18 | 24 | 82.61% | 57.14% | 46 | 42 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.635556' Avg. expression score for this sample: '21.6345' Avg. expression score in LCM sample: '9.92109' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G64280 | NPR1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.884 x 10-3 | 79 | 70 | 53.02% | 149 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64280 | NPR1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.404 x 10-3 | 79 | 15 | 84.04% | 94 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64280 | NPR1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.96576 x 10-1 | 5 | 5 | 50.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64260 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64260 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 1 | 3 | 3 | 50.00% | 50.00% | 2 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.618082' Avg. expression score for this sample: '38.0332' Avg. expression score in LCM sample: '10.2151' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G64260 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.81654 x 10-1 | 11 | 2 | 4 | 13 | 84.62% | 76.47% | 13 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.618082' Avg. expression score for this sample: '34.7387' Avg. expression score in LCM sample: '10.2151' Tissue used: 'full endosperm' |
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| AT1G64260 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 3 | 3 | 1 | 2 | 50.00% | 66.67% | 6 | 3 | TAIR8 |
Avg. embryo expression (dissected): '39.521' Avg. embryo expression (LCM): '40.1372' |
||||
| AT1G64260 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.42455 x 10-1 | 25 | 4 | 86.21% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64260 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.4879 x 10-1 | 5 | 5 | 50.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64255 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.46769 x 10-1 | 5 | 5 | 50.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64255 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.67944 x 10-1 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64255 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 1 | 80.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64255 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.34842 x 10-1 | 1 | 7 | 0 | 1 | 12.50% | 100.00% | 8 | 1 | TAIR8 |
Avg. embryo expression (dissected): '3.18329' Avg. embryo expression (LCM): '.552577' |
||||
| AT1G64255 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.10526 x 10-1 | 0 | 0 | 0 | 10 | 100.00% | 0 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.620031' Avg. expression score for this sample: '4.25826' Avg. expression score in LCM sample: '5.21776' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT1G64255 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 14 | 10 | 0 | 5 | 58.33% | 100.00% | 24 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.620031' Avg. expression score for this sample: '5.24736' Avg. expression score in LCM sample: '5.21776' Tissue used: 'full endosperm' |
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| AT1G64235 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G64235 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.56508' Avg. embryo expression (LCM): '0' |
|||||
| AT1G64235 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G64235 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64235 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64235 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64230 | UBC28 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 138 | 41 | 79 | 99 | 77.09% | 55.62% | 179 | 178 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.016924' Avg. expression score for this sample: '91.5165' Avg. expression score in LCM sample: '40.5956' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G64230 | UBC28 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.508 x 10-3 | 356 | 86 | 98 | 172 | 80.54% | 63.70% | 442 | 270 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.016924' Avg. expression score for this sample: '169.611' Avg. expression score in LCM sample: '40.5956' Tissue used: 'full endosperm' |
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| AT1G64230 | UBC28 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.35762 x 10-1 | 142 | 111 | 47 | 34 | 56.13% | 41.98% | 253 | 81 | TAIR8 |
Avg. embryo expression (dissected): '130.313' Avg. embryo expression (LCM): '96.8266' |
|||
| AT1G64230 | UBC28 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.68 x 10-4 | 189 | 122 | 60.77% | 311 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64230 | UBC28 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.8 x 10-16 | 531 | 69 | 88.50% | 600 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64230 | UBC28 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.22363 x 10-1 | 66 | 29 | 69.47% | 95 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64220 | TOM7-2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64220 | TOM7-2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.9 x 10-6 | 37 | 202 | 15.48% | 239 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64220 | TOM7-2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.31071 x 10-1 | 75 | 8 | 90.36% | 83 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64220 | TOM7-2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.40867 x 10-1 | 9 | 0 | 1 | 0 | 100.00% | 0.00% | 9 | 1 | TAIR8 |
Avg. embryo expression (dissected): '46.0393' Avg. embryo expression (LCM): '59.289' |
|||
| AT1G64220 | TOM7-2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 7 | 0 | 2 | 0 | 100.00% | 0.00% | 7 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.635117' Avg. expression score for this sample: '19.844' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64220 | TOM7-2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.635117' Avg. expression score for this sample: '2.32955' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G64210 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.308049' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G64210 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 1 | 1 | 50.00% | 0 | 2 | TAIR8 |
Avg. embryo expression (dissected): '.844988' Avg. embryo expression (LCM): '0' |
|||||
| AT1G64210 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.145525' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64210 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 15 | 0 | 100.00% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64210 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64210 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.4242 x 10-2 | 1 | 7 | 12.50% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64200 | VHA-E3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.92773 x 10-1 | 163 | 76 | 68.20% | 239 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64200 | VHA-E3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.04256 x 10-1 | 73 | 25 | 74.49% | 98 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64200 | VHA-E3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.84 x 10-4 | 3 | 9 | 25.00% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64200 | VHA-E3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.35832 x 10-1 | 98 | 54 | 35 | 117 | 64.47% | 76.97% | 152 | 152 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.033847' Avg. expression score for this sample: '176.067' Avg. expression score in LCM sample: '73.5925' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64200 | VHA-E3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.6612 x 10-2 | 57 | 21 | 27 | 98 | 73.08% | 78.40% | 78 | 125 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.033847' Avg. expression score for this sample: '87.5702' Avg. expression score in LCM sample: '73.5925' Tissue used: 'full endosperm' |
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| AT1G64200 | VHA-E3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 2 | 1 | 2 | 50.00% | 66.67% | 4 | 3 | TAIR8 |
Avg. embryo expression (dissected): '8.81095' Avg. embryo expression (LCM): '0' |
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| AT1G64195 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT1G64195 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3.5449' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64195 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT1G64195 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64195 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64195 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64190 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 1433 | 81 | 94.65% | 1514 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64190 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.87775 x 10-1 | 167 | 73 | 69.58% | 240 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64190 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.22 x 10-4 | 463 | 178 | 72.23% | 641 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64190 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.41904 x 10-1 | 1187 | 372 | 793 | 1049 | 76.14% | 56.95% | 1559 | 1842 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.134001' Avg. expression score for this sample: '1185.39' Avg. expression score in LCM sample: '489.396' Tissue used: 'full endosperm' |
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| AT1G64190 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.35402 x 10-1 | 1370 | 1010 | 492 | 252 | 57.56% | 33.87% | 2380 | 744 | TAIR8 |
Avg. embryo expression (dissected): '1816.64' Avg. embryo expression (LCM): '1667.06' |
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| AT1G64190 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.70282 x 10-1 | 736 | 372 | 399 | 673 | 66.43% | 62.78% | 1108 | 1072 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.134001' Avg. expression score for this sample: '859.556' Avg. expression score in LCM sample: '489.396' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64185 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.10742 x 10-1 | 11 | 84 | 7 | 156 | 11.58% | 95.71% | 95 | 163 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.217867' Avg. expression score for this sample: '51.9195' Avg. expression score in LCM sample: '7.37835' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64185 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.117 x 10-3 | 12 | 17 | 6 | 100 | 41.38% | 94.34% | 29 | 106 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.217867' Avg. expression score for this sample: '22.3994' Avg. expression score in LCM sample: '7.37835' Tissue used: 'full endosperm' |
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| AT1G64185 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.0 x 10-6 | 40 | 308 | 11 | 136 | 11.49% | 92.52% | 348 | 147 | TAIR8 |
Avg. embryo expression (dissected): '165.753' Avg. embryo expression (LCM): '168.009' |
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| AT1G64185 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.7 x 10-14 | 201 | 10 | 95.26% | 211 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64185 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.77226 x 10-1 | 40 | 17 | 70.18% | 57 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64185 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.1 x 10-5 | 40 | 1 | 97.56% | 41 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64180 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0306 | 6 | 8 | 42.86% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64180 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.5 x 10-8 | 82 | 2 | 97.62% | 84 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64180 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.0 x 10-5 | 188 | 29 | 86.64% | 217 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64180 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.88133 x 10-1 | 34 | 39 | 13 | 15 | 46.58% | 53.57% | 73 | 28 | TAIR8 |
Avg. embryo expression (dissected): '15.4675' Avg. embryo expression (LCM): '6.06579' |
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| AT1G64180 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.87844 x 10-1 | 47 | 14 | 23 | 43 | 77.05% | 65.15% | 61 | 66 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.122266' Avg. expression score for this sample: '15.2349' Avg. expression score in LCM sample: '4.2624' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64180 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.85426 x 10-1 | 77 | 26 | 36 | 90 | 74.76% | 71.43% | 103 | 126 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.122266' Avg. expression score for this sample: '19.2358' Avg. expression score in LCM sample: '4.2624' Tissue used: 'full endosperm' |
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| AT1G64170 | CHX16 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 0.4 | 0 | 1 | 2 | 0 | 0.00% | 0.00% | 1 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.5671' Avg. expression score for this sample: '.434841' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G64170 | CHX16 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '.514902' |
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| AT1G64170 | CHX16 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 1 | 0 | 0 | 66.67% | 3 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.5671' Avg. expression score for this sample: '.635705' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64170 | CHX16 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.0606 x 10-2 | 6 | 0 | 100.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64170 | CHX16 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64170 | CHX16 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.6191 x 10-2 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64160 | DIR5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64160 | DIR5 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64160 | DIR5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64160 | DIR5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64160 | DIR5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.218248' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G64160 | DIR5 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT1G64150 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '9.35404' Avg. embryo expression (LCM): '12.2069' |
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| AT1G64150 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '5.40665' Avg. expression score in LCM sample: '1.10234' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64150 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '6.78914' Avg. expression score in LCM sample: '1.10234' Tissue used: 'full endosperm' |
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| AT1G64150 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64150 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64150 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |