| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G64585 | RTFL22 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '121.106' Avg. embryo expression (LCM): '38.2911' |
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| AT1G64585 | RTFL22 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1873.81' Avg. expression score in LCM sample: '510.841' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64585 | RTFL22 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1028.47' Avg. expression score in LCM sample: '510.841' Tissue used: 'full endosperm' |
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| AT1G64585 | RTFL22 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64585 | RTFL22 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64585 | RTFL22 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64580 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.6356 x 10-2 | 35 | 2 | 94.59% | 37 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.6749 x 10-1 | 11 | 2 | 5 | 12 | 84.62% | 70.59% | 13 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.231038' Avg. expression score for this sample: '41.0337' Avg. expression score in LCM sample: '24.6043' Tissue used: 'full endosperm' |
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| AT1G64580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.04764 x 10-1 | 13 | 2 | 5 | 12 | 86.67% | 70.59% | 15 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.231038' Avg. expression score for this sample: '38.3301' Avg. expression score in LCM sample: '24.6043' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64580 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 5 | 5 | 3 | 4 | 50.00% | 57.14% | 10 | 7 | TAIR8 |
Avg. embryo expression (dissected): '44.9006' Avg. embryo expression (LCM): '26.5739' |
||||
| AT1G64580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.7299 x 10-2 | 16 | 12 | 57.14% | 28 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64570 | DUO3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.26 x 10-4 | 700 | 195 | 78.21% | 895 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64570 | DUO3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.6776 x 10-2 | 73 | 40 | 64.60% | 113 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64570 | DUO3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.8 x 10-18 | 906 | 156 | 85.31% | 1062 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64570 | DUO3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.34566 x 10-1 | 164 | 199 | 50 | 59 | 45.18% | 54.13% | 363 | 109 | TAIR8 |
Avg. embryo expression (dissected): '156.933' Avg. embryo expression (LCM): '108.946' |
|||
| AT1G64570 | DUO3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.94449 x 10-1 | 316 | 161 | 182 | 443 | 66.25% | 70.88% | 477 | 625 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000038' Avg. expression score for this sample: '205.953' Avg. expression score in LCM sample: '89.0841' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G64570 | DUO3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.0 x 10-6 | 440 | 149 | 171 | 522 | 74.70% | 75.32% | 589 | 693 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000038' Avg. expression score for this sample: '185.838' Avg. expression score in LCM sample: '89.0841' Tissue used: 'full endosperm' |
||||
| AT1G64563 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 5 | 2 | 3 | 1 | 71.43% | 25.00% | 7 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3.01442' Avg. expression score in LCM sample: '6.67285' Tissue used: 'full endosperm' |
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| AT1G64563 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 5 | 0 | 4 | 4 | 100.00% | 50.00% | 5 | 8 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3.52109' Avg. expression score in LCM sample: '6.67285' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64563 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.28571 x 10-1 | 0 | 3 | 0 | 0 | 0.00% | 3 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.658327' Avg. embryo expression (LCM): '2.8508' |
|||||
| AT1G64563 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64563 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 17 | 11 | 60.71% | 28 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64563 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.525 x 10-3 | 33 | 2 | 94.29% | 35 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64561 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.014 x 10-2 | 3 | 6 | 33.33% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64561 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '4.8449' Avg. embryo expression (LCM): '0' |
|||||
| AT1G64561 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 1 | 2 | 100.00% | 66.67% | 1 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '4.27123' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64561 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 0 | 2 | 100.00% | 100.00% | 1 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '5.47162' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT1G64561 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64561 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64550 | ABCF3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0971 | 214 | 60 | 78.10% | 274 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64550 | ABCF3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.897 x 10-3 | 32 | 2 | 94.12% | 34 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64550 | ABCF3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.4506 x 10-2 | 230 | 56 | 80.42% | 286 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64550 | ABCF3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.3748 x 10-2 | 76 | 50 | 48 | 193 | 60.32% | 80.08% | 126 | 241 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.064565' Avg. expression score for this sample: '475.136' Avg. expression score in LCM sample: '230.14' Tissue used: 'full endosperm' |
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| AT1G64550 | ABCF3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.79595 x 10-1 | 23 | 20 | 11 | 46 | 53.49% | 80.70% | 43 | 57 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.064565' Avg. expression score for this sample: '621.997' Avg. expression score in LCM sample: '230.14' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64550 | ABCF3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.12613 x 10-1 | 27 | 55 | 15 | 18 | 32.93% | 54.55% | 82 | 33 | TAIR8 |
Avg. embryo expression (dissected): '870.137' Avg. embryo expression (LCM): '583.773' |
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| AT1G64540 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.72482 x 10-1 | 4 | 13 | 1 | 6 | 23.53% | 85.71% | 17 | 7 | TAIR8 |
Avg. embryo expression (dissected): '30.3861' Avg. embryo expression (LCM): '20.7468' |
||||
| AT1G64540 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.64086 x 10-1 | 17 | 3 | 8 | 20 | 85.00% | 71.43% | 20 | 28 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.232242' Avg. expression score for this sample: '43.2906' Avg. expression score in LCM sample: '31.9974' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64540 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.86139 x 10-1 | 4 | 6 | 10 | 38 | 40.00% | 79.17% | 10 | 48 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.232242' Avg. expression score for this sample: '34.3494' Avg. expression score in LCM sample: '31.9974' Tissue used: 'full endosperm' |
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| AT1G64540 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.32568 x 10-1 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64540 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.14864 x 10-1 | 44 | 9 | 83.02% | 53 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64540 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.29301 x 10-1 | 9 | 2 | 81.82% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64530 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 1 | 83.33% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64530 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.73343 x 10-1 | 6 | 1 | 2 | 11 | 85.71% | 84.62% | 7 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.259636' Avg. expression score for this sample: '71.5447' Avg. expression score in LCM sample: '24.6337' Tissue used: 'full endosperm' |
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| AT1G64530 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 4 | 2 | 1 | 2 | 66.67% | 66.67% | 6 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.259636' Avg. expression score for this sample: '57.782' Avg. expression score in LCM sample: '24.6337' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64530 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 4 | 5 | 0 | 1 | 44.44% | 100.00% | 9 | 1 | TAIR8 |
Avg. embryo expression (dissected): '103.959' Avg. embryo expression (LCM): '71.9104' |
||||
| AT1G64530 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.46774 x 10-1 | 1 | 2 | 33.33% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64530 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 1 | 80.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64520 | RPN12a | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.83697 x 10-1 | 93 | 58 | 61.59% | 151 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64520 | RPN12a | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.74773 x 10-1 | 8 | 1 | 88.89% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64520 | RPN12a | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.898 x 10-3 | 78 | 18 | 81.25% | 96 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64520 | RPN12a | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.19134 x 10-1 | 23 | 11 | 2 | 6 | 67.65% | 75.00% | 34 | 8 | TAIR8 |
Avg. embryo expression (dissected): '484.852' Avg. embryo expression (LCM): '375.702' |
|||
| AT1G64520 | RPN12a | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 15 | 11 | 11 | 26 | 57.69% | 70.27% | 26 | 37 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.906642' Avg. expression score for this sample: '373.961' Avg. expression score in LCM sample: '182.181' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G64520 | RPN12a | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 30 | 11 | 23 | 35 | 73.17% | 60.34% | 41 | 58 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.906642' Avg. expression score for this sample: '368.237' Avg. expression score in LCM sample: '182.181' Tissue used: 'full endosperm' |
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| AT1G64510 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '256.244' Avg. expression score in LCM sample: '76.7231' Tissue used: 'full endosperm' |
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| AT1G64510 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '257.31' Avg. expression score in LCM sample: '76.7231' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64510 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 1 | 0 | 0 | 66.67% | 3 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1150.3' Avg. embryo expression (LCM): '910.572' |
|||||
| AT1G64510 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64510 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64510 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64500 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.7 x 10-5 | 28 | 1 | 96.55% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64500 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.0178 x 10-2 | 185 | 105 | 66 | 46 | 63.79% | 41.07% | 290 | 112 | TAIR8 |
Avg. embryo expression (dissected): '190.074' Avg. embryo expression (LCM): '92.7702' |
||||
| AT1G64500 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 158 | 92 | 21 | 70 | 63.20% | 76.92% | 250 | 91 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.003082' Avg. expression score for this sample: '107.185' Avg. expression score in LCM sample: '18.681' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64500 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.08 x 10-4 | 156 | 176 | 45 | 108 | 46.99% | 70.59% | 332 | 153 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.003082' Avg. expression score for this sample: '87.8675' Avg. expression score in LCM sample: '18.681' Tissue used: 'full endosperm' |
|||||
| AT1G64500 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.9 x 10-6 | 31 | 1 | 96.88% | 32 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64500 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.5901 x 10-2 | 7 | 0 | 100.00% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64490 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.10511 x 10-1 | 98 | 55 | 64.05% | 153 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64490 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.2673 x 10-1 | 12 | 2 | 85.71% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64490 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.8 x 10-4 | 120 | 22 | 84.51% | 142 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64490 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.68314 x 10-1 | 40 | 11 | 26 | 24 | 78.43% | 48.00% | 51 | 50 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '36.101' Avg. expression score in LCM sample: '12.6696' Tissue used: 'full endosperm' |
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| AT1G64490 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.87368 x 10-1 | 15 | 3 | 5 | 10 | 83.33% | 66.67% | 18 | 15 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '20.4844' Avg. expression score in LCM sample: '12.6696' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64490 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.54732 x 10-1 | 19 | 8 | 6 | 5 | 70.37% | 45.45% | 27 | 11 | TAIR8 |
Avg. embryo expression (dissected): '32.9215' Avg. embryo expression (LCM): '67.1256' |
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| AT1G64480 | CBL8 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.455764' Avg. embryo expression (LCM): '0' |
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| AT1G64480 | CBL8 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64480 | CBL8 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G64480 | CBL8 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64480 | CBL8 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64480 | CBL8 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64470 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.1877 x 10-2 | 717 | 300 | 70.50% | 1017 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64470 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.9 x 10-9 | 221 | 148 | 121 | 704 | 59.89% | 85.33% | 369 | 825 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '8.7e-09' Avg. expression score for this sample: '271.651' Avg. expression score in LCM sample: '230.963' Tissue used: 'full endosperm' |
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| AT1G64470 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.8656 x 10-2 | 290 | 130 | 120 | 328 | 69.05% | 73.21% | 420 | 448 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '8.7e-09' Avg. expression score for this sample: '199.999' Avg. expression score in LCM sample: '230.963' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64470 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.91892 x 10-1 | 301 | 333 | 126 | 112 | 47.48% | 47.06% | 634 | 238 | TAIR8 |
Avg. embryo expression (dissected): '335.551' Avg. embryo expression (LCM): '130.371' |
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| AT1G64470 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 1368 | 151 | 90.06% | 1519 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64470 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.0734 x 10-2 | 144 | 64 | 69.23% | 208 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64460 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.2 x 10-7 | 65 | 0 | 100.00% | 65 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64460 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.9 x 10-8 | 270 | 25 | 91.53% | 295 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64460 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.14205 x 10-1 | 126 | 37 | 77.30% | 163 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64460 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.41799 x 10-1 | 77 | 62 | 13 | 14 | 55.40% | 51.85% | 139 | 27 | TAIR8 |
Avg. embryo expression (dissected): '219.091' Avg. embryo expression (LCM): '124.091' |
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| AT1G64460 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 9.14151 x 10-1 | 42 | 41 | 25 | 84 | 50.60% | 77.06% | 83 | 109 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.001591' Avg. expression score for this sample: '164.195' Avg. expression score in LCM sample: '153.299' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64460 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.7 x 10-6 | 89 | 27 | 15 | 134 | 76.72% | 89.93% | 116 | 149 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.001591' Avg. expression score for this sample: '147.524' Avg. expression score in LCM sample: '153.299' Tissue used: 'full endosperm' |
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| AT1G64450 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 3 | 1 | 3 | 3 | 75.00% | 50.00% | 4 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '41.8128' Avg. expression score in LCM sample: '60.0704' Tissue used: 'full endosperm' |
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| AT1G64450 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '111.906' Avg. expression score in LCM sample: '60.0704' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64450 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 2 | 0 | 2 | 50.00% | 100.00% | 4 | 2 | TAIR8 |
Avg. embryo expression (dissected): '381.9' Avg. embryo expression (LCM): '239.505' |
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| AT1G64450 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.16667 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64450 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64450 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64440 | RHD1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.5948 x 10-2 | 21 | 1 | 95.45% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64440 | RHD1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.37186 x 10-1 | 3 | 5 | 1 | 0 | 37.50% | 0.00% | 8 | 1 | TAIR8 |
Avg. embryo expression (dissected): '91.0989' Avg. embryo expression (LCM): '26.9633' |
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| AT1G64440 | RHD1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 4 | 1 | 0 | 1 | 80.00% | 100.00% | 5 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '43.439' Avg. expression score in LCM sample: '9.1568' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64440 | RHD1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 4 | 0 | 6 | 6 | 100.00% | 50.00% | 4 | 12 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '46.4733' Avg. expression score in LCM sample: '9.1568' Tissue used: 'full endosperm' |