| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G64720 | CP5 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.6 x 10-12 | 10906 | 8641 | 3730 | 3088 | 55.79% | 45.29% | 19547 | 6818 | TAIR8 |
Avg. embryo expression (dissected): '7512.68' Avg. embryo expression (LCM): '1870.6' |
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| AT1G64720 | CP5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.9 x 10-6 | 2925 | 1244 | 70.16% | 4169 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64720 | CP5 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 5507 | 2008 | 73.28% | 7515 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64720 | CP5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.5 x 10-10 | 1651 | 609 | 73.05% | 2260 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.30287 x 10-1 | 22 | 23 | 48.89% | 45 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64710 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 9.35 x 10-4 | 159 | 325 | 80 | 122 | 32.85% | 60.40% | 484 | 202 | TAIR8 |
Avg. embryo expression (dissected): '226.053' Avg. embryo expression (LCM): '146.621' |
||||
| AT1G64710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.493 x 10-3 | 31 | 66 | 2 | 28 | 31.96% | 93.33% | 97 | 30 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.002202' Avg. expression score for this sample: '25.3042' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64710 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.4262 x 10-1 | 115 | 53 | 62 | 60 | 68.45% | 49.18% | 168 | 122 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.002202' Avg. expression score for this sample: '35.2717' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT1G64710 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.1 x 10-6 | 64 | 115 | 35.75% | 179 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64710 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.5 x 10-5 | 50 | 9 | 84.75% | 59 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64700 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.6 x 10-5 | 29 | 0 | 100.00% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64700 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.86131 x 10-1 | 1 | 5 | 0 | 1 | 16.67% | 100.00% | 6 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.499792' Avg. expression score for this sample: '1.8087' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT1G64700 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 4 | 0 | 6 | 20.00% | 100.00% | 5 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.499792' Avg. expression score for this sample: '3.61391' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G64700 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.369837' Avg. embryo expression (LCM): '0' |
|||||
| AT1G64690 | BLT | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 5 | 9 | 0 | 4 | 35.71% | 100.00% | 14 | 4 | TAIR8 |
Avg. embryo expression (dissected): '13.2603' Avg. embryo expression (LCM): '1.0926' |
|||
| AT1G64690 | BLT | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.36591 x 10-1 | 16 | 11 | 6 | 3 | 59.26% | 33.33% | 27 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '18.2463' Avg. expression score in LCM sample: '7.71641' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G64690 | BLT | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.84368 x 10-1 | 41 | 7 | 5 | 2 | 85.42% | 28.57% | 48 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '20.0455' Avg. expression score in LCM sample: '7.71641' Tissue used: 'full endosperm' |
||||
| AT1G64690 | BLT | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.1 x 10-6 | 49 | 0 | 100.00% | 49 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64690 | BLT | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64690 | BLT | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.00477 x 10-1 | 8 | 0 | 100.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64680 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.92434 x 10-1 | 29 | 11 | 72.50% | 40 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64680 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.0484 x 10-2 | 15 | 15 | 50.00% | 30 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64680 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.47435 x 10-1 | 23 | 10 | 69.70% | 33 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64680 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.91909 x 10-1 | 115 | 33 | 47 | 31 | 77.70% | 39.74% | 148 | 78 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.934004' Avg. expression score for this sample: '156.643' Avg. expression score in LCM sample: '46.4895' Tissue used: 'full endosperm' |
|||||
| AT1G64680 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.47704 x 10-1 | 49 | 8 | 20 | 26 | 85.96% | 56.52% | 57 | 46 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.934004' Avg. expression score for this sample: '125.597' Avg. expression score in LCM sample: '46.4895' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G64680 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.87562 x 10-1 | 39 | 32 | 16 | 12 | 54.93% | 42.86% | 71 | 28 | TAIR8 |
Avg. embryo expression (dissected): '176.117' Avg. embryo expression (LCM): '124.707' |
||||
| AT1G64670 | BDG1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 2 | 0 | 1 | 50.00% | 100.00% | 4 | 1 | TAIR8 |
Avg. embryo expression (dissected): '967.173' Avg. embryo expression (LCM): '268.892' |
|||
| AT1G64670 | BDG1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 1 | 1 | 0 | 50.00% | 0.00% | 2 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '43.0535' Avg. expression score in LCM sample: '.881875' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G64670 | BDG1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '28.6183' Avg. expression score in LCM sample: '.881875' Tissue used: 'full endosperm' |
||||||
| AT1G64670 | BDG1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64670 | BDG1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.4 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64670 | BDG1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64660 | MGL | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.3 x 10-12 | 174 | 23 | 88.32% | 197 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64660 | MGL | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.14724 x 10-1 | 102 | 65 | 61.08% | 167 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64660 | MGL | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.2974 x 10-2 | 39 | 11 | 78.00% | 50 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64660 | MGL | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.68519 x 10-1 | 604 | 237 | 294 | 410 | 71.82% | 58.24% | 841 | 704 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.351542' Avg. expression score for this sample: '516.845' Avg. expression score in LCM sample: '869.22' Tissue used: 'full endosperm' |
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| AT1G64660 | MGL | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.76548 x 10-1 | 1206 | 502 | 598 | 910 | 70.61% | 60.34% | 1708 | 1508 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.351542' Avg. expression score for this sample: '1009.14' Avg. expression score in LCM sample: '869.22' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64660 | MGL | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.74756 x 10-1 | 187 | 135 | 99 | 77 | 58.07% | 43.75% | 322 | 176 | TAIR8 |
Avg. embryo expression (dissected): '238.89' Avg. embryo expression (LCM): '68.0047' |
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| AT1G64650 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.03333 x 10-1 | 95 | 127 | 62 | 50 | 42.79% | 44.64% | 222 | 112 | TAIR8 |
Avg. embryo expression (dissected): '259.319' Avg. embryo expression (LCM): '231.492' |
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| AT1G64650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.61401 x 10-1 | 82 | 39 | 36 | 88 | 67.77% | 70.97% | 121 | 124 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000056' Avg. expression score for this sample: '112.127' Avg. expression score in LCM sample: '132.561' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.8 x 10-6 | 185 | 68 | 45 | 240 | 73.12% | 84.21% | 253 | 285 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000056' Avg. expression score for this sample: '186.224' Avg. expression score in LCM sample: '132.561' Tissue used: 'full endosperm' |
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| AT1G64650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 9.6 x 10-13 | 332 | 26 | 92.74% | 358 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64650 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 972 | 29 | 97.10% | 1001 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.81925 x 10-1 | 72 | 15 | 82.76% | 87 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64640 | ENODL8 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64640 | ENODL8 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64640 | ENODL8 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64640 | ENODL8 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 0 | 2 | 100.00% | 100.00% | 1 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.454545' Avg. expression score for this sample: '175.473' Avg. expression score in LCM sample: '317.019' Tissue used: 'full endosperm' |
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| AT1G64640 | ENODL8 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.454545' Avg. expression score for this sample: '188.806' Avg. expression score in LCM sample: '317.019' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64640 | ENODL8 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 0 | 1 | 0 | 3 | 0.00% | 100.00% | 1 | 3 | TAIR8 |
Avg. embryo expression (dissected): '665.914' Avg. embryo expression (LCM): '335.515' |
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| AT1G64630 | WNK10 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '55.7217' Avg. embryo expression (LCM): '35.4026' |
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| AT1G64630 | WNK10 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '46.0226' Avg. expression score in LCM sample: '17.4464' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64630 | WNK10 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '54.4681' Avg. expression score in LCM sample: '17.4464' Tissue used: 'full endosperm' |
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| AT1G64630 | WNK10 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 1 | 83.33% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64630 | WNK10 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64630 | WNK10 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 1 | 80.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64628 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.39179 x 10-1 | 211 | 103 | 67.20% | 314 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64628 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.9 x 10-12 | 378 | 38 | 90.87% | 416 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64628 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 41 | 16 | 71.93% | 57 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64628 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.74211 x 10-1 | 96 | 26 | 41 | 75 | 78.69% | 64.66% | 122 | 116 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.193497' Avg. expression score for this sample: '312.04' Avg. expression score in LCM sample: '536.459' Tissue used: 'full endosperm' |
|||||
| AT1G64628 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.84969 x 10-1 | 46 | 15 | 19 | 37 | 75.41% | 66.07% | 61 | 56 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.193497' Avg. expression score for this sample: '369.209' Avg. expression score in LCM sample: '536.459' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64628 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 25 | 23 | 14 | 11 | 52.08% | 44.00% | 48 | 25 | TAIR8 |
Avg. embryo expression (dissected): '382.529' Avg. embryo expression (LCM): '385.699' |
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| AT1G64625 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.78074 x 10-1 | 18 | 21 | 17 | 6 | 46.15% | 26.09% | 39 | 23 | TAIR8 |
Avg. embryo expression (dissected): '281.265' Avg. embryo expression (LCM): '98.4467' |
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| AT1G64625 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 10 | 4 | 8 | 10 | 71.43% | 55.56% | 14 | 18 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.503422' Avg. expression score for this sample: '84.9145' Avg. expression score in LCM sample: '24.134' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64625 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.90671 x 10-1 | 13 | 6 | 5 | 29 | 68.42% | 85.29% | 19 | 34 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.503422' Avg. expression score for this sample: '80.2678' Avg. expression score in LCM sample: '24.134' Tissue used: 'full endosperm' |
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| AT1G64625 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.14874 x 10-1 | 3 | 2 | 60.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64625 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.05543 x 10-1 | 11 | 2 | 84.62% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64625 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.3444 | 13 | 2 | 86.67% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64620 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.6 x 10-7 | 103 | 3 | 97.17% | 106 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.70182 x 10-1 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.3786 x 10-2 | 18 | 0 | 100.00% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.2104 x 10-2 | 25 | 2 | 9 | 38 | 92.59% | 80.85% | 27 | 47 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.191433' Avg. expression score for this sample: '221.798' Avg. expression score in LCM sample: '172.26' Tissue used: 'full endosperm' |
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| AT1G64620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.80761 x 10-1 | 16 | 12 | 13 | 23 | 57.14% | 63.89% | 28 | 36 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.191433' Avg. expression score for this sample: '281.707' Avg. expression score in LCM sample: '172.26' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64620 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 5 | 2 | 4 | 1 | 71.43% | 20.00% | 7 | 5 | TAIR8 |
Avg. embryo expression (dissected): '50.0976' Avg. embryo expression (LCM): '19.7798' |
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| AT1G64618 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '4.53004' Avg. embryo expression (LCM): '2.54939' |
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| AT1G64618 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '42.4858' Avg. expression score in LCM sample: '11.92' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64618 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '31.462' Avg. expression score in LCM sample: '11.92' Tissue used: 'full endosperm' |
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| AT1G64618 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64618 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64618 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64610 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.58301 x 10-1 | 11 | 2 | 84.62% | 13 | TAIR8 | Mutant effect: 'MEG not affected by met1, dme or fie' | ||||||||
| AT1G64610 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.3187 x 10-1 | 32 | 0 | 100.00% | 32 | TAIR8 | Mutant effect: 'MEG not affected by met1, dme or fie' | ||||||||
| AT1G64610 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.50027 x 10-1 | 40 | 3 | 93.02% | 43 | TAIR8 | Mutant effect: 'MEG not affected by met1, dme or fie' | ||||||||
| AT1G64610 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | MEG | 7.5 x 10-5 | 23 | 0 | 1 | 25 | 100.00% | 96.15% | 23 | 26 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000049' Avg. expression score for this sample: '20.1918' Avg. expression score in LCM sample: '5.46762' Tissue used: 'full endosperm' |
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| AT1G64610 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | MEG | 1.0 | 1 | 1 | 0 | 5 | 50.00% | 100.00% | 2 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000049' Avg. expression score for this sample: '8.10511' Avg. expression score in LCM sample: '5.46762' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64610 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.82051 x 10-1 | 1 | 7 | 0 | 0 | 12.50% | 8 | 0 | TAIR8 |
Avg. embryo expression (dissected): '12.6193' Avg. embryo expression (LCM): '7.25886' |
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| AT1G64600 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 0.2746 | 31 | 52 | 10 | 14 | 37.35% | 58.33% | 83 | 24 | TAIR8 |
Avg. embryo expression (dissected): '165.026' Avg. embryo expression (LCM): '203.361' |
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| AT1G64600 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.00017 x 10-1 | 35 | 20 | 5 | 52 | 63.64% | 91.23% | 55 | 57 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.015276' Avg. expression score for this sample: '76.4815' Avg. expression score in LCM sample: '34.1286' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64600 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.1928 x 10-2 | 44 | 23 | 25 | 100 | 65.67% | 80.00% | 67 | 125 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.015276' Avg. expression score for this sample: '68.4302' Avg. expression score in LCM sample: '34.1286' Tissue used: 'full endosperm' |
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| AT1G64600 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.8367 x 10-2 | 104 | 50 | 67.53% | 154 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64600 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.72861 x 10-1 | 7 | 4 | 63.64% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64600 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 188 | 60 | 75.81% | 248 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64590 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64590 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64590 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64590 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G64590 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.562725' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64590 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.212378' Avg. embryo expression (LCM): '0' |