| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G64900 | CYP89A2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 0.0 | 494 | 14 | 20 | 839 | 97.24% | 97.67% | 508 | 859 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '400.013' Avg. expression score in LCM sample: '4.15951' Tissue used: 'full endosperm' |
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| AT1G64900 | CYP89A2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.67245 x 10-1 | 147 | 2 | 98.66% | 149 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64890 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 11 | 6 | 64.71% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64890 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.33169 x 10-1 | 52 | 19 | 48 | 41 | 73.24% | 46.07% | 71 | 89 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.845444' Avg. expression score for this sample: '22.0146' Avg. expression score in LCM sample: '15.7562' Tissue used: 'full endosperm' |
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| AT1G64890 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.9 x 10-13 | 92 | 1 | 98.92% | 93 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64890 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.63858 x 10-1 | 33 | 25 | 7 | 3 | 56.90% | 30.00% | 58 | 10 | TAIR8 |
Avg. embryo expression (dissected): '22.7065' Avg. embryo expression (LCM): '21.965' |
||||
| AT1G64890 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.1892 x 10-2 | 47 | 4 | 10 | 14 | 92.16% | 58.33% | 51 | 24 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.845444' Avg. expression score for this sample: '18.6467' Avg. expression score in LCM sample: '15.7562' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G64890 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.77851 x 10-1 | 37 | 21 | 63.79% | 58 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64880 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64880 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '841.032' Avg. expression score in LCM sample: '219.322' Tissue used: 'full endosperm' |
|||||||
| AT1G64880 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64880 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '460.32' Avg. expression score in LCM sample: '219.322' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G64880 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1051.19' Avg. embryo expression (LCM): '1468.66' |
||||||
| AT1G64880 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64870 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 120 | 13 | 90.23% | 133 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64870 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT1G64870 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.13559' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT1G64870 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 172 | 75 | 69.64% | 247 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64870 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64870 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.944464' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT1G64860 | SIGA | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.03565 x 10-1 | 527 | 188 | 315 | 549 | 73.71% | 63.54% | 715 | 864 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.65866' Avg. expression score for this sample: '138.782' Avg. expression score in LCM sample: '33.085' Tissue used: 'full endosperm' |
||||
| AT1G64860 | SIGA | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.02311 x 10-1 | 43 | 29 | 59.72% | 72 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64860 | SIGA | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.91151 x 10-1 | 268 | 115 | 124 | 185 | 69.97% | 59.87% | 383 | 309 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.65866' Avg. expression score for this sample: '91.5371' Avg. expression score in LCM sample: '33.085' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G64860 | SIGA | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.0717 x 10-2 | 332 | 201 | 139 | 80 | 62.29% | 36.53% | 533 | 219 | TAIR8 |
Avg. embryo expression (dissected): '157.194' Avg. embryo expression (LCM): '111.131' |
|||
| AT1G64860 | SIGA | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.1 x 10-22 | 473 | 69 | 87.27% | 542 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64860 | SIGA | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.7 x 10-16 | 154 | 9 | 94.48% | 163 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64850 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 9 | 0 | 100.00% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64850 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64850 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.3382 x 10-2 | 6 | 0 | 0 | 10 | 100.00% | 100.00% | 6 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.073755' Avg. expression score for this sample: '184.777' Avg. expression score in LCM sample: '17.4464' Tissue used: 'full endosperm' |
|||||
| AT1G64850 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.35294 x 10-1 | 26 | 0 | 100.00% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64850 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 4 | 2 | 2 | 0 | 66.67% | 0.00% | 6 | 2 | TAIR8 |
Avg. embryo expression (dissected): '171.261' Avg. embryo expression (LCM): '137.881' |
||||
| AT1G64850 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 4 | 2 | 0 | 3 | 66.67% | 100.00% | 6 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.073755' Avg. expression score for this sample: '105.915' Avg. expression score in LCM sample: '17.4464' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G64840 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.38584 x 10-1 | 194 | 88 | 76 | 151 | 68.79% | 66.52% | 282 | 227 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.024291' Avg. expression score for this sample: '204.804' Avg. expression score in LCM sample: '73.71' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G64840 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.376 x 10-3 | 222 | 146 | 28 | 32 | 60.33% | 53.33% | 368 | 60 | TAIR8 |
Avg. embryo expression (dissected): '211.834' Avg. embryo expression (LCM): '142.1' |
||||
| AT1G64840 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.8 x 10-10 | 249 | 32 | 88.61% | 281 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64840 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.056 x 10-3 | 149 | 31 | 82.78% | 180 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64840 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.503 x 10-3 | 210 | 44 | 97 | 201 | 82.68% | 67.45% | 254 | 298 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.024291' Avg. expression score for this sample: '158.955' Avg. expression score in LCM sample: '73.71' Tissue used: 'full endosperm' |
|||||
| AT1G64840 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.80196 x 10-1 | 46 | 25 | 64.79% | 71 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64830 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G64830 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 1 | 2 | 0 | 0 | 33.33% | 3 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3.20274' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT1G64830 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.1009 x 10-2 | 76 | 16 | 82.61% | 92 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64830 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.672559' Avg. embryo expression (LCM): '0' |
||||||
| AT1G64830 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.597169' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G64830 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.63717 x 10-1 | 91 | 59 | 60.67% | 150 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64820 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.977 x 10-2 | 8 | 0 | 100.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64820 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.61489 x 10-1 | 16 | 25 | 0 | 11 | 39.02% | 100.00% | 41 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.29364' Avg. expression score for this sample: '39.2575' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT1G64820 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.0152 x 10-2 | 0 | 5 | 0.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64820 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 6 | 4 | 1 | 6 | 60.00% | 85.71% | 10 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.29364' Avg. expression score for this sample: '9.61901' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64820 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 1 | 0 | 2 | 50.00% | 100.00% | 2 | 2 | TAIR8 |
Avg. embryo expression (dissected): '5.07178' Avg. embryo expression (LCM): '.841425' |
||||
| AT1G64820 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.38562 x 10-1 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64810 | APO1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.7 x 10-12 | 109 | 5 | 95.61% | 114 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64810 | APO1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 0.7357 | 69 | 77 | 6 | 6 | 47.26% | 50.00% | 146 | 12 | TAIR8 |
Avg. embryo expression (dissected): '110.719' Avg. embryo expression (LCM): '54.7303' |
|||
| AT1G64810 | APO1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 9.40222 x 10-1 | 144 | 77 | 58 | 119 | 65.16% | 67.23% | 221 | 177 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.739423' Avg. expression score for this sample: '180.863' Avg. expression score in LCM sample: '26.6179' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G64810 | APO1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.3716 x 10-1 | 27 | 15 | 64.29% | 42 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64810 | APO1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 55 | 27 | 67.07% | 82 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64810 | APO1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.3932 x 10-1 | 213 | 89 | 102 | 201 | 70.53% | 66.34% | 302 | 303 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.739423' Avg. expression score for this sample: '234.906' Avg. expression score in LCM sample: '26.6179' Tissue used: 'full endosperm' |
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| AT1G64800 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.35548 x 10-1 | 354 | 115 | 299 | 501 | 75.48% | 62.62% | 469 | 800 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.597096' Avg. expression score for this sample: '1409.53' Avg. expression score in LCM sample: '1224.12' Tissue used: 'full endosperm' |
|||||
| AT1G64800 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.64147 x 10-1 | 68 | 44 | 60.71% | 112 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64800 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.69688 x 10-1 | 490 | 166 | 304 | 366 | 74.70% | 54.63% | 656 | 670 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.597096' Avg. expression score for this sample: '1814.47' Avg. expression score in LCM sample: '1224.12' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G64800 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.0539 x 10-2 | 26 | 7 | 2 | 0 | 78.79% | 0.00% | 33 | 2 | TAIR8 |
Avg. embryo expression (dissected): '78.0892' Avg. embryo expression (LCM): '50.6739' |
||||
| AT1G64800 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.7395 x 10-2 | 16 | 1 | 94.12% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64800 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.50776 x 10-1 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64790 | ILA | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.92474 x 10-1 | 298 | 151 | 66.37% | 449 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64790 | ILA | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.7841 x 10-1 | 42 | 12 | 77.78% | 54 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64790 | ILA | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.3294 x 10-2 | 132 | 40 | 69 | 188 | 76.74% | 73.15% | 172 | 257 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.184703' Avg. expression score for this sample: '74.3847' Avg. expression score in LCM sample: '44.7698' Tissue used: 'full endosperm' |
||||
| AT1G64790 | ILA | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.4 x 10-8 | 417 | 78 | 84.24% | 495 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64790 | ILA | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.73844 x 10-1 | 188 | 173 | 51 | 60 | 52.08% | 54.05% | 361 | 111 | TAIR8 |
Avg. embryo expression (dissected): '120.669' Avg. embryo expression (LCM): '147.337' |
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| AT1G64790 | ILA | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.14374 x 10-1 | 70 | 58 | 41 | 97 | 54.69% | 70.29% | 128 | 138 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.184703' Avg. expression score for this sample: '50.9034' Avg. expression score in LCM sample: '44.7698' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64780 | AMT1;2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.033858' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64780 | AMT1;2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.312173' Avg. embryo expression (LCM): '0' |
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| AT1G64780 | AMT1;2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64780 | AMT1;2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64780 | AMT1;2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.3858 x 10-2 | 27 | 1 | 2 | 0 | 96.43% | 0.00% | 28 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.033858' Avg. expression score for this sample: '3.47957' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G64780 | AMT1;2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64770 | PnsB2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.13 x 10-4 | 0 | 5 | 0.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64770 | PnsB2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.47687 x 10-1 | 27 | 3 | 5 | 11 | 90.00% | 68.75% | 30 | 16 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.042308' Avg. expression score for this sample: '10.9866' Avg. expression score in LCM sample: '2.26348' Tissue used: 'full endosperm' |
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| AT1G64770 | PnsB2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.4 x 10-7 | 0 | 10 | 0.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64770 | PnsB2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.92506 x 10-1 | 46 | 32 | 5 | 6 | 58.97% | 54.55% | 78 | 11 | TAIR8 |
Avg. embryo expression (dissected): '31.2427' Avg. embryo expression (LCM): '17.3936' |
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| AT1G64770 | PnsB2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.60405 x 10-1 | 37 | 7 | 6 | 10 | 84.09% | 62.50% | 44 | 16 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.042308' Avg. expression score for this sample: '16.6501' Avg. expression score in LCM sample: '2.26348' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64770 | PnsB2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.09907 x 10-1 | 11 | 0 | 100.00% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.8 x 10-17 | 546 | 76 | 87.78% | 622 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.4 x 10-10 | 173 | 171 | 117 | 830 | 50.29% | 87.65% | 344 | 947 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000031' Avg. expression score for this sample: '268.798' Avg. expression score in LCM sample: '106.163' Tissue used: 'full endosperm' |
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| AT1G64760 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.55 x 10-4 | 105 | 18 | 85.37% | 123 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64760 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.28033 x 10-1 | 223 | 312 | 90 | 562 | 41.68% | 86.20% | 535 | 652 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000031' Avg. expression score for this sample: '374.861' Avg. expression score in LCM sample: '106.163' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64760 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.3599 x 10-1 | 135 | 190 | 36 | 62 | 41.54% | 63.27% | 325 | 98 | TAIR8 |
Avg. embryo expression (dissected): '204.865' Avg. embryo expression (LCM): '90.7106' |
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| AT1G64760 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.2342 x 10-2 | 519 | 155 | 77.00% | 674 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G64750 | DSS1(I) | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 1 | 66.67% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64750 | DSS1(I) | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.08392 x 10-1 | 5 | 2 | 0 | 1 | 71.43% | 100.00% | 7 | 1 | TAIR8 |
Avg. embryo expression (dissected): '2781.58' Avg. embryo expression (LCM): '2619.87' |
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| AT1G64750 | DSS1(I) | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.37186 x 10-1 | 1 | 1 | 4 | 3 | 50.00% | 42.86% | 2 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.669921' Avg. expression score for this sample: '2321.7' Avg. expression score in LCM sample: '534.71' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64750 | DSS1(I) | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.08791 x 10-1 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64750 | DSS1(I) | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64750 | DSS1(I) | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.669921' Avg. expression score for this sample: '2398.24' Avg. expression score in LCM sample: '534.71' Tissue used: 'full endosperm' |
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| AT1G64740 | TUA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.96 x 10-3 | 27 | 7 | 7 | 50 | 79.41% | 87.72% | 34 | 57 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.01758' Avg. expression score for this sample: '253.396' Avg. expression score in LCM sample: '138.322' Tissue used: 'full endosperm' |
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| AT1G64740 | TUA1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.9334 x 10-1 | 12 | 1 | 92.31% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64740 | TUA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 0 | 5 | 7 | 100.00% | 58.33% | 3 | 12 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.01758' Avg. expression score for this sample: '130.271' Avg. expression score in LCM sample: '138.322' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G64740 | TUA1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 2 | 0 | 0 | 50.00% | 4 | 0 | TAIR8 |
Avg. embryo expression (dissected): '113.892' Avg. embryo expression (LCM): '137.253' |
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| AT1G64740 | TUA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.2128 x 10-1 | 64 | 6 | 91.43% | 70 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64740 | TUA1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.58708 x 10-1 | 49 | 6 | 89.09% | 55 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64720 | CP5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.9 x 10-6 | 2925 | 1244 | 70.16% | 4169 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G64720 | CP5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.5 x 10-10 | 1651 | 609 | 73.05% | 2260 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |