Displaying data sets 135101 - 135200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G65360 AGL23 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.492277'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G65360 AGL23 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G65352 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G65352 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65352 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G65352 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G65352 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65352 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65350 UBQ13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65350 UBQ13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65350 UBQ13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.378118'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G65350 UBQ13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65350 UBQ13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G65350 UBQ13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G65342 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '4.39468'
Tissue used: 'pure endosperm, no chalazal'
AT1G65342 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65342 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '4.39468'
Tissue used: 'full endosperm'
AT1G65342 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G65342 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65342 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65340 CYP96A3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.4 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65340 CYP96A3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65340 CYP96A3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G65340 CYP96A3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65340 CYP96A3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G65340 CYP96A3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.589571'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G65330 PHE1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G65330 PHE1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65330 PHE1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G65330 PHE1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G65330 PHE1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65330 PHE1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65320 CBSX6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 63 26 70.79% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65320 CBSX6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65320 CBSX6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 2 1 66.67% 33.33% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.797226'
Avg. expression score for this sample: '36.9008'
Avg. expression score in LCM sample: '42.6093'
Tissue used: 'pure endosperm, no chalazal'
AT1G65320 CBSX6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.53683 x 10-1 22 14 61.11% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65320 CBSX6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.64807 x 10-1 12 3 4 10 80.00% 71.43% 15 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.797226'
Avg. expression score for this sample: '55.2157'
Avg. expression score in LCM sample: '42.6093'
Tissue used: 'full endosperm'
AT1G65320 CBSX6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 2 0 2 0.00% 100.00% 2 2 TAIR8 Avg. embryo expression (dissected): '44.4257'
Avg. embryo expression (LCM): '37.7511'
AT1G65310 XTH17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G65310 XTH17 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65310 XTH17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G65310 XTH17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G65310 XTH17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65310 XTH17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 3 40.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65300 AGL38 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 887 928 48.87% 1815 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65300 AGL38 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65300 AGL38 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '17.5787'
Tissue used: 'full endosperm'
AT1G65300 AGL38 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 759 199 79.23% 958 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65300 AGL38 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G65300 AGL38 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '17.5787'
Tissue used: 'pure endosperm, no chalazal'
AT1G65295 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 52 20 24 38 72.22% 61.29% 72 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.9e-06'
Avg. expression score for this sample: '87.0457'
Avg. expression score in LCM sample: '23.208'
Tissue used: 'pure endosperm, no chalazal'
AT1G65295 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 766 12 98.46% 778 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65295 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.2 x 10-8 122 14 43 177 89.71% 80.45% 136 220 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.9e-06'
Avg. expression score for this sample: '162.386'
Avg. expression score in LCM sample: '23.208'
Tissue used: 'full endosperm'
AT1G65295 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.88663 x 10-1 39 33 16 14 54.17% 46.67% 72 30 TAIR8 Avg. embryo expression (dissected): '134.924'
Avg. embryo expression (LCM): '138.81'
AT1G65295 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.96294 x 10-1 23 2 92.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65295 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3 x 10-14 248 5 98.02% 253 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65290 mtACP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.40959 x 10-1 1426 614 69.90% 2040 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65290 mtACP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.7 x 10-4 449 276 61.93% 725 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65290 mtACP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.652 x 10-3 1230 1504 255 274 44.99% 51.80% 2734 529 TAIR8 Avg. embryo expression (dissected): '1224.31'
Avg. embryo expression (LCM): '1650.35'
AT1G65290 mtACP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 3206 357 89.98% 3563 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65290 mtACP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.74494 x 10-1 785 436 320 709 64.29% 68.90% 1221 1029 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0195'
Avg. expression score for this sample: '625.362'
Avg. expression score in LCM sample: '271.088'
Tissue used: 'pure endosperm, no chalazal'
AT1G65290 mtACP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.326 x 10-3 1147 293 683 1168 79.65% 63.10% 1440 1851 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0195'
Avg. expression score for this sample: '653.864'
Avg. expression score in LCM sample: '271.088'
Tissue used: 'full endosperm'
AT1G65280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.1 x 10-7 722 164 306 658 81.49% 68.26% 886 964 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.3e-06'
Avg. expression score for this sample: '157.766'
Avg. expression score in LCM sample: '36.7448'
Tissue used: 'full endosperm'
AT1G65280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1174 136 89.62% 1310 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.0131 x 10-2 231 133 78 37 63.46% 32.17% 364 115 TAIR8 Avg. embryo expression (dissected): '100.648'
Avg. embryo expression (LCM): '65.7567'
AT1G65280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.73961 x 10-1 358 104 157 217 77.49% 58.02% 462 374 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.3e-06'
Avg. expression score for this sample: '116.913'
Avg. expression score in LCM sample: '36.7448'
Tissue used: 'pure endosperm, no chalazal'
AT1G65280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.87333 x 10-1 97 33 74.62% 130 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.9254 x 10-2 970 311 75.72% 1281 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.75269 x 10-1 46 8 85.19% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.3581 x 10-2 1 4 20.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 12 0 9 2 100.00% 18.18% 12 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.161112'
Avg. expression score for this sample: '179.173'
Avg. expression score in LCM sample: '57.3072'
Tissue used: 'pure endosperm, no chalazal'
AT1G65270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.01185 x 10-1 44 5 89.80% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.1442 x 10-2 32 2 7 18 94.12% 72.00% 34 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.161112'
Avg. expression score for this sample: '120.893'
Avg. expression score in LCM sample: '57.3072'
Tissue used: 'full endosperm'
AT1G65270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.72482 x 10-1 13 3 7 1 81.25% 12.50% 16 8 TAIR8 Avg. embryo expression (dissected): '269.172'
Avg. embryo expression (LCM): '153.026'
AT1G65260 PTAC4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '44.4022'
Avg. embryo expression (LCM): '35.8799'
AT1G65260 PTAC4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65260 PTAC4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '31.4508'
Avg. expression score in LCM sample: '22.1057'
Tissue used: 'pure endosperm, no chalazal'
AT1G65260 PTAC4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '46.8691'
Avg. expression score in LCM sample: '22.1057'
Tissue used: 'full endosperm'
AT1G65260 PTAC4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65260 PTAC4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.3756 x 10-2 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.8248 x 10-2 0 4 0.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 7 5 6 16 58.33% 72.73% 12 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.825934'
Avg. expression score for this sample: '12.0754'
Avg. expression score in LCM sample: '2.99837'
Tissue used: 'full endosperm'
AT1G65250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.62596 x 10-1 17 4 80.95% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.95098 x 10-1 4 7 1 1 36.36% 50.00% 11 2 TAIR8 Avg. embryo expression (dissected): '6.56812'
Avg. embryo expression (LCM): '7.68585'
AT1G65250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.69921 x 10-1 4 3 3 1 57.14% 25.00% 7 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.825934'
Avg. expression score for this sample: '6.14963'
Avg. expression score in LCM sample: '2.99837'
Tissue used: 'pure endosperm, no chalazal'
AT1G65240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.25577 x 10-1 50 25 39 69 66.67% 63.89% 75 108 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.53444'
Avg. expression score for this sample: '77.0199'
Avg. expression score in LCM sample: '101.93'
Tissue used: 'pure endosperm, no chalazal'
AT1G65240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1921 x 10-2 51 14 78.46% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.84296 x 10-1 52 24 43 65 68.42% 60.19% 76 108 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.53444'
Avg. expression score for this sample: '73.9675'
Avg. expression score in LCM sample: '101.93'
Tissue used: 'full endosperm'
AT1G65240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 4 0 0 50.00% 8 0 TAIR8 Avg. embryo expression (dissected): '5.91015'
Avg. embryo expression (LCM): '9.13008'
AT1G65240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.48026 x 10-1 9 10 47.37% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.83 x 10-4 62 12 83.78% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '89.1621'
Avg. embryo expression (LCM): '43.3899'
AT1G65230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G65230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.5319'
Avg. expression score in LCM sample: '10.1563'
Tissue used: 'pure endosperm, no chalazal'
AT1G65230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '70.3784'
Avg. expression score in LCM sample: '10.1563'
Tissue used: 'full endosperm'
AT1G65220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.5002 x 10-2 27 6 10 35 81.82% 77.78% 33 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.125557'
Avg. expression score for this sample: '290.597'
Avg. expression score in LCM sample: '108.368'
Tissue used: 'full endosperm'
AT1G65220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.26517 x 10-1 36 9 80.00% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'