GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G154397	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	50434	17568	31776	37213	74.17%	53.94%	68002	68989	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G154397	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	50565	32339	38485	27096	60.99%	41.32%	82904	65581	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G154394	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.019126 x 10^-1	84	77	73	70	52.17%	48.95%	161	143	RefGen V2	χ2 p-value for B73 x Mo17: '.5811695' χ2 p-value for Mo17 x B73: '.8019126' Biased in favor of strain: ''
GRMZM2G154394	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.59247 x 10^-2	27	22	16	17	55.10%	51.52%	49	33	RefGen V2	χ2 p-value for B73 x Mo17: '.0859247' χ2 p-value for Mo17 x B73: '.0648381' Biased in favor of strain: ''
GRMZM2G154344	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.5 x 10^-18	780	197	556	350	79.84%	38.63%	977	906	RefGen V2	χ2 p-value for B73 x Mo17: '2.50e-18' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G154344	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	671	248	677	243	73.01%	26.41%	919	920	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G154332	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.111 x 10^-4	0	14	0	11	0.00%	100.00%	14	11	RefGen V2	χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: 'Mo17'
GRMZM2G154332	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.64 x 10^-7	0	31	0	53	0.00%	100.00%	31	53	RefGen V2	χ2 p-value for B73 x Mo17: '3.43e-15' χ2 p-value for Mo17 x B73: '2.64e-07' Biased in favor of strain: 'Mo17'
GRMZM2G154328	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.07 x 10^-10	931	305	526	565	75.32%	51.79%	1236	1091	RefGen V2	χ2 p-value for B73 x Mo17: '1.07e-10' χ2 p-value for Mo17 x B73: '1.89e-25' Biased in favor of strain: 'B73'
GRMZM2G154328	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.26 x 10^-7	387	214	313	194	64.39%	38.26%	601	507	RefGen V2	χ2 p-value for B73 x Mo17: '1.70e-12' χ2 p-value for Mo17 x B73: '1.26e-07' Biased in favor of strain: 'B73'
GRMZM2G154320	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	1	3	1	80.00%	25.00%	5	4	RefGen V2	χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G154320	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	0		0.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G154316	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G154316	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	7	5	3	36.36%	37.50%	11	8	RefGen V2	χ2 p-value for B73 x Mo17: '.3657123' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G154312	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1740	920	1657	772	65.41%	31.78%	2660	2429	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G154312	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.753 x 10^-4	481	178	309	265	72.99%	46.17%	659	574	RefGen V2	χ2 p-value for B73 x Mo17: '.0005753' χ2 p-value for Mo17 x B73: '2.04e-25' Biased in favor of strain: 'B73'
GRMZM2G154301	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G154301	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.08 x 10^-11	240	83	219	98	74.30%	30.91%	323	317	RefGen V2	χ2 p-value for B73 x Mo17: '2.42e-18' χ2 p-value for Mo17 x B73: '1.08e-11' Biased in favor of strain: 'B73'
GRMZM2G154290	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.5323 x 10^-3	71	31	87	56	69.61%	39.16%	102	143	RefGen V2	χ2 p-value for B73 x Mo17: '.0000748' χ2 p-value for Mo17 x B73: '.0095323' Biased in favor of strain: 'B73'
GRMZM2G154290	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.311943 x 10^-1	30	14	29	12	68.18%	29.27%	44	41	RefGen V2	χ2 p-value for B73 x Mo17: '.8311943' χ2 p-value for Mo17 x B73: '3.78e-07' Biased in favor of strain: ''
GRMZM2G154278	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1137	9	585	5	99.21%	0.85%	1146	590	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G154278	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	756	4	647	1	99.47%	0.15%	760	648	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G154267	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.992155 x 10^-1	171	196	127	138	46.59%	52.08%	367	265	RefGen V2	χ2 p-value for B73 x Mo17: '.1918965' χ2 p-value for Mo17 x B73: '.4992155' Biased in favor of strain: ''
GRMZM2G154267	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.60532 x 10^-2	59	44	45	127	57.28%	73.84%	103	172	RefGen V2	χ2 p-value for B73 x Mo17: '.0433232' χ2 p-value for Mo17 x B73: '.0460532' Biased in favor of strain: ''
GRMZM2G154229	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.548353 x 10^-1	291	202	219	398	59.03%	64.51%	493	617	RefGen V2	χ2 p-value for B73 x Mo17: '.0003197' χ2 p-value for Mo17 x B73: '.2548353' Biased in favor of strain: ''
GRMZM2G154229	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.514818 x 10^-1	133	121	127	153	52.36%	54.64%	254	280	RefGen V2	χ2 p-value for B73 x Mo17: '.4514818' χ2 p-value for Mo17 x B73: '.1202328' Biased in favor of strain: ''
GRMZM2G154221	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.691714 x 10^-1	18	13	16	11	58.06%	40.74%	31	27	RefGen V2	χ2 p-value for B73 x Mo17: '.3691714' χ2 p-value for Mo17 x B73: '.3359238' Biased in favor of strain: ''
GRMZM2G154221	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.959648 x 10^-1	25	9	13	16	73.53%	55.17%	34	29	RefGen V2	χ2 p-value for B73 x Mo17: '.3959648' χ2 p-value for Mo17 x B73: '.1891612' Biased in favor of strain: ''
GRMZM2G154218	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	756	132	519	357	85.14%	40.75%	888	876	RefGen V2	χ2 p-value for B73 x Mo17: '1.72e-31' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G154218	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	674	133	795	141	83.52%	15.06%	807	936	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G154216	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.9813 x 10^-3	396	319	225	623	55.38%	73.47%	715	848	RefGen V2	χ2 p-value for B73 x Mo17: '.0039813' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G154216	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.3763 x 10^-2	1840	1227	3080	6501	59.99%	67.85%	3067	9581	RefGen V2	χ2 p-value for B73 x Mo17: '4.51e-15' χ2 p-value for Mo17 x B73: '.013763' Biased in favor of strain: ''
GRMZM2G154211	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	1	5	100.00%	83.33%	4	6	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.3864763' Biased in favor of strain: ''
GRMZM2G154211	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.31 x 10^-27	215	43	336	66	83.33%	16.42%	258	402	RefGen V2	χ2 p-value for B73 x Mo17: '9.31e-27' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G154182	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	9677	968	1015	3145	90.91%	75.60%	10645	4160	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G154182	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	maternally biased	0.0	94389	19314	22786	53160	83.01%	70.00%	113703	75946	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G154165	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.562569 x 10^-1	167	77	140	185	68.44%	56.92%	244	325	RefGen V2	χ2 p-value for B73 x Mo17: '.5562569' χ2 p-value for Mo17 x B73: '.0001944' Biased in favor of strain: ''
GRMZM2G154165	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.600323 x 10^-1	220	197	156	189	52.76%	54.78%	417	345	RefGen V2	χ2 p-value for B73 x Mo17: '.2600323' χ2 p-value for Mo17 x B73: '.0756242' Biased in favor of strain: ''
GRMZM2G154156	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	983	193	805	174	83.59%	17.77%	1176	979	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G154156	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1373	209	607	390	86.79%	39.12%	1582	997	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G154151	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.47 x 10^-6	794	289	510	744	73.31%	59.33%	1083	1254	RefGen V2	χ2 p-value for B73 x Mo17: '3.47e-06' χ2 p-value for Mo17 x B73: '3.56e-08' Biased in favor of strain: 'B73'
GRMZM2G154151	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.43 x 10^-5	303	112	210	130	73.01%	38.24%	415	340	RefGen V2	χ2 p-value for B73 x Mo17: '6.86e-21' χ2 p-value for Mo17 x B73: '.0000143' Biased in favor of strain: 'B73'
GRMZM2G154149	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	867	107	784	114	89.01%	12.69%	974	898	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G154149	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.653 x 10^-4	11	42	10	62	20.75%	86.11%	53	72	RefGen V2	χ2 p-value for B73 x Mo17: '1.34e-12' χ2 p-value for Mo17 x B73: '.0004653' Biased in favor of strain: 'Mo17'
GRMZM2G154124	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	3	2		40.00%	0	5	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G154124	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.591692 x 10^-1	94	107	71	105	46.77%	59.66%	201	176	RefGen V2	χ2 p-value for B73 x Mo17: '.3591692' χ2 p-value for Mo17 x B73: '.0103818' Biased in favor of strain: ''
GRMZM2G154119	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.31 x 10^-5	21	0	19	0	100.00%	0.00%	21	19	RefGen V2	χ2 p-value for B73 x Mo17: '4.59e-06' χ2 p-value for Mo17 x B73: '.0000131' Biased in favor of strain: 'B73'
GRMZM2G154119	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		12	0	4	0	100.00%	0.00%	12	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0143062' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM2G154093	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	2	5	11	77.78%	68.75%	9	16	RefGen V2	χ2 p-value for B73 x Mo17: '.4795075' χ2 p-value for Mo17 x B73: '.8596839' Biased in favor of strain: ''
GRMZM2G154093	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.224313 x 10^-1	47	41	31	49	53.41%	61.25%	88	80	RefGen V2	χ2 p-value for B73 x Mo17: '.5224313' χ2 p-value for Mo17 x B73: '.0441713' Biased in favor of strain: ''
GRMZM2G154090	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.66 x 10^-11	85	3	49	2	96.59%	3.92%	88	51	RefGen V2	χ2 p-value for B73 x Mo17: '2.31e-18' χ2 p-value for Mo17 x B73: '4.66e-11' Biased in favor of strain: 'B73'
GRMZM2G154090	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G154087	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.827649 x 10^-1	15	8	5	12	65.22%	70.59%	23	17	RefGen V2	χ2 p-value for B73 x Mo17: '.8827649' χ2 p-value for Mo17 x B73: '.7316008' Biased in favor of strain: ''
GRMZM2G154087	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.854947 x 10^-1	28	26	22	14	51.85%	38.89%	54	36	RefGen V2	χ2 p-value for B73 x Mo17: '.7854947' χ2 p-value for Mo17 x B73: '.1824224' Biased in favor of strain: ''
GRMZM2G154078	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	0	19	1	100.00%	5.00%	8	20	RefGen V2	χ2 p-value for B73 x Mo17: '.0046777' χ2 p-value for Mo17 x B73: '.000057' Biased in favor of strain: ''
GRMZM2G154078	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	15	8	100.00%	34.78%	4	23	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.0011798' Biased in favor of strain: ''
GRMZM2G154059	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.598502 x 10^-1	115	63	80	200	64.61%	71.43%	178	280	RefGen V2	χ2 p-value for B73 x Mo17: '.5598502' χ2 p-value for Mo17 x B73: '.0909691' Biased in favor of strain: ''
GRMZM2G154059	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.371373 x 10^-1	115	124	108	105	48.12%	49.30%	239	213	RefGen V2	χ2 p-value for B73 x Mo17: '.5604578' χ2 p-value for Mo17 x B73: '.8371373' Biased in favor of strain: ''
GRMZM2G154048	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.790997 x 10^-1	24	28	35	40	46.15%	53.33%	52	75	RefGen V2	χ2 p-value for B73 x Mo17: '.5790997' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G154048	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G154036	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.7825 x 10^-2	58	11	14	15	84.06%	51.72%	69	29	RefGen V2	χ2 p-value for B73 x Mo17: '.0021804' χ2 p-value for Mo17 x B73: '.087825' Biased in favor of strain: ''
GRMZM2G154036	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.673 x 10^-4	76	11	57	26	87.36%	31.33%	87	83	RefGen V2	χ2 p-value for B73 x Mo17: '3.20e-12' χ2 p-value for Mo17 x B73: '.0006673' Biased in favor of strain: 'B73'
GRMZM2G154029	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	855	249	707	245	77.45%	25.74%	1104	952	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G154029	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.37 x 10^-13	371	75	234	182	83.18%	43.75%	446	416	RefGen V2	χ2 p-value for B73 x Mo17: '1.37e-13' χ2 p-value for Mo17 x B73: '3.57e-23' Biased in favor of strain: 'B73'
GRMZM2G154007	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.95346 x 10^-2	33	0	8	34	100.00%	80.95%	33	42	RefGen V2	χ2 p-value for B73 x Mo17: '.0000487' χ2 p-value for Mo17 x B73: '.0495346' Biased in favor of strain: ''
GRMZM2G154007	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.419382 x 10^-1	35	39	30	41	47.30%	57.75%	74	71	RefGen V2	χ2 p-value for B73 x Mo17: '.6419382' χ2 p-value for Mo17 x B73: '.1917363' Biased in favor of strain: ''
GRMZM2G153999	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.863 x 10^-4	218	136	216	145	61.58%	40.17%	354	361	RefGen V2	χ2 p-value for B73 x Mo17: '.0000131' χ2 p-value for Mo17 x B73: '.0001863' Biased in favor of strain: 'B73'
GRMZM2G153999	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.492415 x 10^-1	60	27	58	62	68.97%	51.67%	87	120	RefGen V2	χ2 p-value for B73 x Mo17: '.6492415' χ2 p-value for Mo17 x B73: '.0004909' Biased in favor of strain: ''
GRMZM2G153984	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	5	3	3	16.67%	50.00%	6	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0093742' χ2 p-value for Mo17 x B73: '.3864762' Biased in favor of strain: ''
GRMZM2G153984	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.270892 x 10^-1	6	4	3	9	60.00%	75.00%	10	12	RefGen V2	χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G153977	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	286	11	191	5	96.30%	2.55%	297	196	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G153977	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	563	11	290	53	98.08%	15.45%	574	343	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G153945	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.610071 x 10^-1	17	6	8	22	73.91%	73.33%	23	30	RefGen V2	χ2 p-value for B73 x Mo17: '.4610071' χ2 p-value for Mo17 x B73: '.4385782' Biased in favor of strain: ''
GRMZM2G153945	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.97488 x 10^-2	58	26	65	41	69.05%	38.68%	84	106	RefGen V2	χ2 p-value for B73 x Mo17: '.0004803' χ2 p-value for Mo17 x B73: '.0197488' Biased in favor of strain: 'B73'
GRMZM2G153928	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	40	40	36	48	50.00%	57.14%	80	84	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1904303' Biased in favor of strain: ''
GRMZM2G153928	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.251993 x 10^-1	45	21	13	28	68.18%	68.29%	66	41	RefGen V2	χ2 p-value for B73 x Mo17: '.7940317' χ2 p-value for Mo17 x B73: '.8251993' Biased in favor of strain: ''
GRMZM2G153899	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.23316 x 10^-2	190	69	102	116	73.36%	53.21%	259	218	RefGen V2	χ2 p-value for B73 x Mo17: '.0223316' χ2 p-value for Mo17 x B73: '.000025' Biased in favor of strain: ''
GRMZM2G153899	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.746 x 10^-4	119	67	84	43	63.98%	33.86%	186	127	RefGen V2	χ2 p-value for B73 x Mo17: '.0001374' χ2 p-value for Mo17 x B73: '.0002746' Biased in favor of strain: 'B73'
GRMZM2G153871	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	11	0	8	0.00%	100.00%	11	8	RefGen V2	χ2 p-value for B73 x Mo17: '.0009111' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM2G153871	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	4	0	29	0.00%	100.00%	4	29	RefGen V2	χ2 p-value for B73 x Mo17: '.0046775' χ2 p-value for Mo17 x B73: '.0001402' Biased in favor of strain: ''
GRMZM2G153823	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.66085 x 10^-2	308	119	188	295	72.13%	61.08%	427	483	RefGen V2	χ2 p-value for B73 x Mo17: '.0166085' χ2 p-value for Mo17 x B73: '.0091571' Biased in favor of strain: ''
GRMZM2G153823	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.324 x 10^-3	163	63	118	77	72.12%	39.49%	226	195	RefGen V2	χ2 p-value for B73 x Mo17: '2.89e-11' χ2 p-value for Mo17 x B73: '.003324' Biased in favor of strain: 'B73'
GRMZM2G153815	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.73 x 10^-13	232	46	148	47	83.45%	24.10%	278	195	RefGen V2	χ2 p-value for B73 x Mo17: '6.73e-29' χ2 p-value for Mo17 x B73: '4.73e-13' Biased in favor of strain: 'B73'
GRMZM2G153815	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.04 x 10^-6	91	12	66	54	88.35%	45.00%	103	120	RefGen V2	χ2 p-value for B73 x Mo17: '3.04e-06' χ2 p-value for Mo17 x B73: '4.78e-07' Biased in favor of strain: 'B73'
GRMZM2G153797	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.615 x 10^-4	95	115	91	274	45.24%	75.07%	210	365	RefGen V2	χ2 p-value for B73 x Mo17: '4.48e-11' χ2 p-value for Mo17 x B73: '.0006615' Biased in favor of strain: 'Mo17'
GRMZM2G153797	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.434207 x 10^-1	192	215	165	171	47.17%	50.89%	407	336	RefGen V2	χ2 p-value for B73 x Mo17: '.2542581' χ2 p-value for Mo17 x B73: '.7434207' Biased in favor of strain: ''
GRMZM2G153792	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.999 x 10^-4	277	176	300	224	61.15%	42.75%	453	524	RefGen V2	χ2 p-value for B73 x Mo17: '2.08e-06' χ2 p-value for Mo17 x B73: '.0008999' Biased in favor of strain: 'B73'
GRMZM2G153792	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.95 x 10^-8	489	149	214	255	76.65%	54.37%	638	469	RefGen V2	χ2 p-value for B73 x Mo17: '8.95e-08' χ2 p-value for Mo17 x B73: '1.62e-08' Biased in favor of strain: 'B73'
GRMZM2G153769	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.590387 x 10^-1	58	27	34	35	68.24%	50.72%	85	69	RefGen V2	χ2 p-value for B73 x Mo17: '.7590387' χ2 p-value for Mo17 x B73: '.0049673' Biased in favor of strain: ''
GRMZM2G153769	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.3345 x 10^-3	111	55	77	42	66.87%	35.29%	166	119	RefGen V2	χ2 p-value for B73 x Mo17: '.0000138' χ2 p-value for Mo17 x B73: '.0013345' Biased in favor of strain: 'B73'
GRMZM2G153766	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.7755 x 10^-3	215	90	125	85	70.49%	40.48%	305	210	RefGen V2	χ2 p-value for B73 x Mo17: '8.22e-13' χ2 p-value for Mo17 x B73: '.0057755' Biased in favor of strain: 'B73'
GRMZM2G153766	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.387544 x 10^-1	124	53	72	91	70.06%	55.83%	177	163	RefGen V2	χ2 p-value for B73 x Mo17: '.3387544' χ2 p-value for Mo17 x B73: '.0033312' Biased in favor of strain: ''
GRMZM2G153754	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.635637 x 10^-1	30	10	14	16	75.00%	53.33%	40	30	RefGen V2	χ2 p-value for B73 x Mo17: '.2635637' χ2 p-value for Mo17 x B73: '.1213352' Biased in favor of strain: ''
GRMZM2G153754	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.12 x 10^-8	324	194	341	207	62.55%	37.77%	518	548	RefGen V2	χ2 p-value for B73 x Mo17: '1.12e-08' χ2 p-value for Mo17 x B73: '1.04e-08' Biased in favor of strain: 'B73'
GRMZM2G153745	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	4	0	50.00%	0.00%	2	4	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G153745	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G153722	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.15 x 10^-11	2161	824	1651	2345	72.40%	58.68%	2985	3996	RefGen V2	χ2 p-value for B73 x Mo17: '3.15e-11' χ2 p-value for Mo17 x B73: '9.65e-27' Biased in favor of strain: 'B73'
GRMZM2G153722	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.27 x 10^-6	1471	890	998	793	62.30%	44.28%	2361	1791	RefGen V2	χ2 p-value for B73 x Mo17: '5.96e-33' χ2 p-value for Mo17 x B73: '1.27e-06' Biased in favor of strain: 'B73'
GRMZM2G153704	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.5 x 10^-29	545	179	547	232	75.28%	29.78%	724	779	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.54e-29' Biased in favor of strain: 'B73'
GRMZM2G153704	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.21 x 10^-9	180	28	150	66	86.54%	30.56%	208	216	RefGen V2	χ2 p-value for B73 x Mo17: '1.21e-09' χ2 p-value for Mo17 x B73: '2.11e-29' Biased in favor of strain: 'B73'

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