Displaying data sets 13401 - 13500 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G47670 NF-YB6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3111.37'
Avg. embryo expression (LCM): '889.172'
AT5G47670 NF-YB6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47670 NF-YB6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47670 NF-YB6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.04395 x 10-1 196 131 114 236 59.94% 67.43% 327 350 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.892443'
Avg. expression score for this sample: '1057.59'
Avg. expression score in LCM sample: '91.0095'
Tissue used: 'pure endosperm, no chalazal'
AT5G47660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.69877 x 10-1 146 66 61 155 68.87% 71.76% 212 216 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.892443'
Avg. expression score for this sample: '606.905'
Avg. expression score in LCM sample: '91.0095'
Tissue used: 'full endosperm'
AT5G47660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.28337 x 10-1 191 252 68 75 43.12% 52.45% 443 143 TAIR8 Avg. embryo expression (dissected): '1270.16'
Avg. embryo expression (LCM): '721.993'
AT5G47660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.86687 x 10-1 25 7 78.12% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.6892 x 10-2 79 23 77.45% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9 x 10-6 129 24 84.31% 153 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47650 NUDT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.43958 x 10-1 34 11 15 23 75.56% 60.53% 45 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.579396'
Avg. expression score for this sample: '256.923'
Avg. expression score in LCM sample: '77.9871'
Tissue used: 'pure endosperm, no chalazal'
AT5G47650 NUDT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.36471 x 10-1 53 26 41 56 67.09% 57.73% 79 97 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.579396'
Avg. expression score for this sample: '253.423'
Avg. expression score in LCM sample: '77.9871'
Tissue used: 'full endosperm'
AT5G47650 NUDT2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.47465 x 10-1 18 19 10 3 48.65% 23.08% 37 13 TAIR8 Avg. embryo expression (dissected): '237.44'
Avg. embryo expression (LCM): '162.634'
AT5G47650 NUDT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47650 NUDT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0193 x 10-2 65 17 79.27% 82 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47650 NUDT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1 x 10-8 149 21 87.65% 170 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47640 NF-YB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.64356 x 10-1 31 21 6 18 59.62% 75.00% 52 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000042'
Avg. expression score for this sample: '299.922'
Avg. expression score in LCM sample: '33.7611'
Tissue used: 'pure endosperm, no chalazal'
AT5G47640 NF-YB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.7 x 10-8 58 12 8 112 82.86% 93.33% 70 120 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000042'
Avg. expression score for this sample: '182.42'
Avg. expression score in LCM sample: '33.7611'
Tissue used: 'full endosperm'
AT5G47640 NF-YB2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 9 7 0 0 56.25% 16 0 TAIR8 Avg. embryo expression (dissected): '108.223'
Avg. embryo expression (LCM): '100.946'
AT5G47640 NF-YB2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.5572 x 10-2 35 1 97.22% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47640 NF-YB2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.19421 x 10-1 99 12 89.19% 111 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47640 NF-YB2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.348 x 10-3 144 12 92.31% 156 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47635 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 3 100.00% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.024778'
Avg. expression score for this sample: '19.4286'
Avg. expression score in LCM sample: '3.80676'
Tissue used: 'pure endosperm, no chalazal'
AT5G47635 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.9681 x 10-2 3 1 0 15 75.00% 100.00% 4 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.024778'
Avg. expression score for this sample: '29.4006'
Avg. expression score in LCM sample: '3.80676'
Tissue used: 'full endosperm'
AT5G47635 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.53385'
Avg. embryo expression (LCM): '0'
AT5G47635 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47635 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47635 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47630 mtACP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '40.5745'
Avg. expression score in LCM sample: '36.9212'
Tissue used: 'pure endosperm, no chalazal'
AT5G47630 mtACP3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '58.7561'
Avg. expression score in LCM sample: '36.9212'
Tissue used: 'full endosperm'
AT5G47630 mtACP3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '48.5803'
Avg. embryo expression (LCM): '90.6855'
AT5G47630 mtACP3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47630 mtACP3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47630 mtACP3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.6581 x 10-2 33 20 10 62 62.26% 86.11% 53 72 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.011304'
Avg. expression score for this sample: '211.946'
Avg. expression score in LCM sample: '96.7564'
Tissue used: 'pure endosperm, no chalazal'
AT5G47620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.881 x 10-2 28 9 11 51 75.68% 82.26% 37 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.011304'
Avg. expression score for this sample: '147.643'
Avg. expression score in LCM sample: '96.7564'
Tissue used: 'full endosperm'
AT5G47620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.05249 x 10-1 22 19 6 8 53.66% 57.14% 41 14 TAIR8 Avg. embryo expression (dissected): '130.619'
Avg. embryo expression (LCM): '117.523'
AT5G47620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 10 3 76.92% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.22989 x 10-1 113 47 70.62% 160 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.52566 x 10-1 57 18 76.00% 75 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.359317'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G47610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.461044'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G47610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '15.6998'
Avg. embryo expression (LCM): '1.73308'
AT5G47610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.28889'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G47600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.557095'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G47600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '18.5113'
Avg. embryo expression (LCM): '54.4163'
AT5G47600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.73343 x 10-1 15 2 1 2 88.24% 66.67% 17 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.7802'
Avg. expression score for this sample: '8.98944'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G47590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 3 2 5 25.00% 71.43% 4 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.7802'
Avg. expression score for this sample: '4.9371'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G47590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.04208 x 10-1 12 10 2 6 54.55% 75.00% 22 8 TAIR8 Avg. embryo expression (dissected): '21.7513'
Avg. embryo expression (LCM): '19.3653'
AT5G47590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.20432 x 10-1 4 5 44.44% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.77273 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.094 x 10-3 63 3 95.45% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47580 ASG7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 3 1 5 0.00% 83.33% 3 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '51.6486'
Avg. expression score in LCM sample: '34.2902'
Tissue used: 'pure endosperm, no chalazal'
AT5G47580 ASG7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '40.5421'
Avg. expression score in LCM sample: '34.2902'
Tissue used: 'full endosperm'
AT5G47580 ASG7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 3 0 1 50.00% 100.00% 6 1 TAIR8 Avg. embryo expression (dissected): '33.6814'
Avg. embryo expression (LCM): '36.6208'
AT5G47580 ASG7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47580 ASG7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47580 ASG7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.0226 x 10-2 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '360.843'
Avg. expression score in LCM sample: '239.414'
Tissue used: 'pure endosperm, no chalazal'
AT5G47570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '422.838'
Avg. expression score in LCM sample: '239.414'
Tissue used: 'full endosperm'
AT5G47570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '390.442'
Avg. embryo expression (LCM): '437.591'
AT5G47570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47560 TDT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 1.9656 x 10-2 19 0 0 0 100.00% 19 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000114'
Avg. expression score for this sample: '12.9493'
Avg. expression score in LCM sample: '16.2265'
Tissue used: 'pure endosperm, no chalazal'
AT5G47560 TDT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 1.0287 x 10-2 25 2 1 12 92.59% 92.31% 27 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000114'
Avg. expression score for this sample: '35.8684'
Avg. expression score in LCM sample: '16.2265'
Tissue used: 'full endosperm'
AT5G47560 TDT embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 2 0 0 50.00% 4 0 TAIR8 Avg. embryo expression (dissected): '1.81173'
Avg. embryo expression (LCM): '.552577'
AT5G47560 TDT endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 7 0 100.00% 7 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G47560 TDT endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.113 x 10-2 38 9 80.85% 47 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G47560 TDT endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8438 x 10-2 132 0 100.00% 132 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G47550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.5 x 10-18 2373 125 1874 378 95.00% 16.79% 2498 2252 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '21694.7'
Avg. expression score in LCM sample: '5733.54'
Tissue used: 'pure endosperm, no chalazal'
AT5G47550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 5408 147 3976 240 97.35% 5.69% 5555 4216 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '15155.2'
Avg. expression score in LCM sample: '5733.54'
Tissue used: 'full endosperm'
AT5G47550 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.18 x 10-4 98 11 34 8 89.91% 19.05% 109 42 TAIR8 Avg. embryo expression (dissected): '1041'
Avg. embryo expression (LCM): '41.481'
AT5G47550 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 83 1026 7.48% 1109 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47550 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 20 195 9.30% 215 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47550 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 176 5 97.24% 181 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '29.9425'
Avg. expression score in LCM sample: '42.7856'
Tissue used: 'pure endosperm, no chalazal'
AT5G47540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '40.7932'
Avg. expression score in LCM sample: '42.7856'
Tissue used: 'full endosperm'
AT5G47540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.84222'
Avg. embryo expression (LCM): '4.93552'
AT5G47540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.1677 x 10-1 6 1 0 5 85.71% 100.00% 7 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000795'
Avg. expression score for this sample: '92.0038'
Avg. expression score in LCM sample: '2.99837'
Tissue used: 'pure endosperm, no chalazal'
AT5G47530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.739 x 10-3 18 0 1 14 100.00% 93.33% 18 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000795'
Avg. expression score for this sample: '339.063'
Avg. expression score in LCM sample: '2.99837'
Tissue used: 'full endosperm'
AT5G47530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '11.0779'
Avg. embryo expression (LCM): '0'
AT5G47530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.48792 x 10-1 32 3 91.43% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 32 2 94.12% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47520 RABA5a endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.12341 x 10-1 139 63 63 150 68.81% 70.42% 202 213 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.145663'
Avg. expression score for this sample: '259.063'
Avg. expression score in LCM sample: '135.265'
Tissue used: 'pure endosperm, no chalazal'
AT5G47520 RABA5a endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.77303 x 10-1 123 82 68 229 60.00% 77.10% 205 297 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.145663'
Avg. expression score for this sample: '229.862'
Avg. expression score in LCM sample: '135.265'
Tissue used: 'full endosperm'
AT5G47520 RABA5a embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.774 x 10-3 116 67 11 21 63.39% 65.62% 183 32 TAIR8 Avg. embryo expression (dissected): '179.444'
Avg. embryo expression (LCM): '134.038'
AT5G47520 RABA5a endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.9965 x 10-2 37 27 57.81% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47520 RABA5a endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1 x 10-13 138 6 95.83% 144 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G47520 RABA5a endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.2 x 10-11 87 2 97.75% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'