Displaying data sets 133601 - 133700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G67635 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G67635 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G67630 POLA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.55036 x 10-1 15 1 4 8 93.75% 66.67% 16 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.731245'
Avg. expression score for this sample: '44.2411'
Avg. expression score in LCM sample: '56.6899'
Tissue used: 'pure endosperm, no chalazal'
AT1G67630 POLA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.26584 x 10-1 30 16 10 11 65.22% 52.38% 46 21 TAIR8 Avg. embryo expression (dissected): '135.421'
Avg. embryo expression (LCM): '163.262'
AT1G67630 POLA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.31218 x 10-1 9 5 13 21 64.29% 61.76% 14 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.731245'
Avg. expression score for this sample: '43.8338'
Avg. expression score in LCM sample: '56.6899'
Tissue used: 'full endosperm'
AT1G67630 POLA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.476 x 10-3 35 3 92.11% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67630 POLA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.33795 x 10-1 12 2 85.71% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67630 POLA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.75476 x 10-1 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67623 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67623 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.1166'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G67623 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.293031'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G67623 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.837387'
Avg. embryo expression (LCM): '0'
AT1G67623 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67623 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.57544 x 10-1 18 3 85.71% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.22058 x 10-1 15 5 75.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 5 0 1 37.50% 100.00% 8 1 TAIR8 Avg. embryo expression (dissected): '3.70081'
Avg. embryo expression (LCM): '11.5037'
AT1G67620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.21739 x 10-1 7 1 0 5 87.50% 100.00% 8 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.040215'
Avg. expression score for this sample: '5.35861'
Avg. expression score in LCM sample: '1.69026'
Tissue used: 'full endosperm'
AT1G67620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.82043 x 10-1 7 0 1 2 100.00% 66.67% 7 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.040215'
Avg. expression score for this sample: '3.24494'
Avg. expression score in LCM sample: '1.69026'
Tissue used: 'pure endosperm, no chalazal'
AT1G67600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.1927 x 10-1 3 0 5 0 100.00% 0.00% 3 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.123273'
Avg. expression score for this sample: '4.78558'
Avg. expression score in LCM sample: '1.51389'
Tissue used: 'pure endosperm, no chalazal'
AT1G67600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 1 1 0 50.00% 0.00% 2 1 TAIR8 Avg. embryo expression (dissected): '1.95861'
Avg. embryo expression (LCM): '2.58707'
AT1G67600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.9057 x 10-2 25 0 9 23 100.00% 71.88% 25 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.123273'
Avg. expression score for this sample: '17.5139'
Avg. expression score in LCM sample: '1.51389'
Tissue used: 'full endosperm'
AT1G67600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.72133 x 10-1 17 1 94.44% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.723 x 10-3 37 0 100.00% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.11363 x 10-1 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '193.167'
Avg. expression score in LCM sample: '18.1666'
Tissue used: 'full endosperm'
AT1G67590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '236.702'
Avg. expression score in LCM sample: '18.1666'
Tissue used: 'pure endosperm, no chalazal'
AT1G67590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2644.87'
Avg. embryo expression (LCM): '1257.8'
AT1G67590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.075 x 10-3 51 8 86.44% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 34 19 64.15% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.65317 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.62554 x 10-1 11 9 0 2 55.00% 100.00% 20 2 TAIR8 Avg. embryo expression (dissected): '121.159'
Avg. embryo expression (LCM): '108.217'
AT1G67580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.54596 x 10-1 19 9 15 22 67.86% 59.46% 28 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.873741'
Avg. expression score for this sample: '223.001'
Avg. expression score in LCM sample: '67.581'
Tissue used: 'full endosperm'
AT1G67580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 4 3 9 63.64% 75.00% 11 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.873741'
Avg. expression score for this sample: '148.797'
Avg. expression score in LCM sample: '67.581'
Tissue used: 'pure endosperm, no chalazal'
AT1G67570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '16.3713'
Avg. expression score in LCM sample: '50.9871'
Tissue used: 'pure endosperm, no chalazal'
AT1G67570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '9.78847'
Avg. embryo expression (LCM): '19.7421'
AT1G67570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.6675'
Avg. expression score in LCM sample: '50.9871'
Tissue used: 'full endosperm'
AT1G67570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67560 LOX6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67560 LOX6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.70466'
Avg. expression score in LCM sample: '.499729'
Tissue used: 'full endosperm'
AT1G67560 LOX6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.47923'
Avg. expression score in LCM sample: '.499729'
Tissue used: 'pure endosperm, no chalazal'
AT1G67560 LOX6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.9118'
Avg. embryo expression (LCM): '2.14752'
AT1G67560 LOX6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67560 LOX6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67550 URE endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.6051 x 10-2 121 45 72.89% 166 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67550 URE endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.881 x 10-2 29 6 82.86% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67550 URE endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.02529 x 10-1 11 7 61.11% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67550 URE embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.72322 x 10-1 111 97 24 44 53.37% 64.71% 208 68 TAIR8 Avg. embryo expression (dissected): '47.6625'
Avg. embryo expression (LCM): '20.3575'
AT1G67550 URE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.5008 x 10-1 73 25 66 82 74.49% 55.41% 98 148 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.6532'
Avg. expression score for this sample: '19.4874'
Avg. expression score in LCM sample: '3.33643'
Tissue used: 'full endosperm'
AT1G67550 URE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.02067 x 10-1 57 11 37 45 83.82% 54.88% 68 82 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.6532'
Avg. expression score for this sample: '17.9156'
Avg. expression score in LCM sample: '3.33643'
Tissue used: 'pure endosperm, no chalazal'
AT1G67540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.28308 x 10-1 2 4 3 4 33.33% 57.14% 6 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.087686'
Avg. expression score for this sample: '38.1288'
Avg. expression score in LCM sample: '21.3414'
Tissue used: 'pure endosperm, no chalazal'
AT1G67540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.600352'
Avg. embryo expression (LCM): '0'
AT1G67540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.20347 x 10-1 2 0 8 2 100.00% 20.00% 2 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.087686'
Avg. expression score for this sample: '10.644'
Avg. expression score in LCM sample: '21.3414'
Tissue used: 'full endosperm'
AT1G67540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.1567 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 5 7 66.67% 58.33% 3 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454459'
Avg. expression score for this sample: '17.3174'
Avg. expression score in LCM sample: '7.48124'
Tissue used: 'full endosperm'
AT1G67530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.07678 x 10-1 5 3 6 5 62.50% 45.45% 8 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454459'
Avg. expression score for this sample: '11.195'
Avg. expression score in LCM sample: '7.48124'
Tissue used: 'pure endosperm, no chalazal'
AT1G67530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.18245 x 10-1 9 11 6 1 45.00% 14.29% 20 7 TAIR8 Avg. embryo expression (dissected): '17.3582'
Avg. embryo expression (LCM): '13.2493'
AT1G67530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.75 x 10-4 25 1 96.15% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7921 x 10-2 13 1 92.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G67520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.070163'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G67520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.109364'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G67510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004158'
Avg. expression score for this sample: '31.0828'
Avg. expression score in LCM sample: '2.71911'
Tissue used: 'pure endosperm, no chalazal'
AT1G67510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '36.3519'
Avg. embryo expression (LCM): '23.8613'
AT1G67510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.9656 x 10-2 14 0 0 5 100.00% 100.00% 14 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004158'
Avg. expression score for this sample: '130.502'
Avg. expression score in LCM sample: '2.71911'
Tissue used: 'full endosperm'
AT1G67510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67500 REV3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67500 REV3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.04764 x 10-1 12 1 6 13 92.31% 68.42% 13 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.364086'
Avg. expression score for this sample: '28.3144'
Avg. expression score in LCM sample: '9.877'
Tissue used: 'full endosperm'
AT1G67500 REV3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 2 2 6 75.00% 75.00% 8 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.364086'
Avg. expression score for this sample: '15.3481'
Avg. expression score in LCM sample: '9.877'
Tissue used: 'pure endosperm, no chalazal'
AT1G67500 REV3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 8 4 2 50.00% 33.33% 16 6 TAIR8 Avg. embryo expression (dissected): '45.0199'
Avg. embryo expression (LCM): '30.2285'
AT1G67500 REV3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.00056 x 10-1 34 7 82.93% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67500 REV3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.61 x 10-4 71 1 98.61% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67490 GCS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.81 x 10-4 29 0 100.00% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67490 GCS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 14 6 70.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67490 GCS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.50589 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67490 GCS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 5 2 2 44.44% 50.00% 9 4 TAIR8 Avg. embryo expression (dissected): '116.916'
Avg. embryo expression (LCM): '104.274'
AT1G67490 GCS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.32547 x 10-1 10 2 3 11 83.33% 78.57% 12 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.812726'
Avg. expression score for this sample: '99.5522'
Avg. expression score in LCM sample: '52.6773'
Tissue used: 'full endosperm'
AT1G67490 GCS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.10382 x 10-1 4 6 1 4 40.00% 80.00% 10 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.812726'
Avg. expression score for this sample: '67.8499'
Avg. expression score in LCM sample: '52.6773'
Tissue used: 'pure endosperm, no chalazal'
AT1G67481 MIR839A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G67481 MIR839A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G67481 MIR839A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G67481 MIR839A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67481 MIR839A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67481 MIR839A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G67480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 2 100.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '35.1233'
Avg. expression score in LCM sample: '25.398'
Tissue used: 'full endosperm'