| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G155899 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.97 x 10-4 | 195 | 60 | 85 | 102 | 76.47% | 54.55% | 255 | 187 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000897' χ2 p-value for Mo17 x B73: '.0004378' Biased in favor of strain: 'B73' |
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| GRMZM2G155899 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.263405 x 10-1 | 99 | 74 | 58 | 59 | 57.23% | 50.43% | 173 | 117 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0573394' χ2 p-value for Mo17 x B73: '.9263405' Biased in favor of strain: '' |
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| GRMZM2G155889 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.015757 x 10-1 | 207 | 175 | 203 | 164 | 54.19% | 44.69% | 382 | 367 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1015757' χ2 p-value for Mo17 x B73: '.0417721' Biased in favor of strain: '' |
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| GRMZM2G155889 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.19393 x 10-2 | 75 | 58 | 76 | 69 | 56.39% | 47.59% | 133 | 145 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0119393' χ2 p-value for Mo17 x B73: '1.09e-06' Biased in favor of strain: '' |
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| GRMZM2G155877 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 301 | 0 | 174 | 0 | 100.00% | 0.00% | 301 | 174 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.35e-34' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G155877 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.07 x 10-15 | 108 | 0 | 63 | 0 | 100.00% | 0.00% | 108 | 63 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.69e-25' χ2 p-value for Mo17 x B73: '2.07e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G155868 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.322846 x 10-1 | 331 | 159 | 242 | 210 | 67.55% | 46.46% | 490 | 452 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.84e-15' χ2 p-value for Mo17 x B73: '.1322846' Biased in favor of strain: '' |
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| GRMZM2G155868 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.300807 x 10-1 | 1018 | 364 | 474 | 897 | 73.66% | 65.43% | 1382 | 1371 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.47e-08' χ2 p-value for Mo17 x B73: '.3300807' Biased in favor of strain: '' |
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| GRMZM2G155849 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 3 | 5 | 4 | 70.00% | 44.44% | 10 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8230743' χ2 p-value for Mo17 x B73: '.1572991' Biased in favor of strain: '' |
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| GRMZM2G155849 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.9319 x 10-3 | 12 | 29 | 4 | 17 | 29.27% | 80.95% | 41 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0079319' χ2 p-value for Mo17 x B73: '.0045563' Biased in favor of strain: 'Mo17' |
||||
| GRMZM2G155837 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 2 | 5 | 2 | 60.00% | 28.57% | 5 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: '' |
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| GRMZM2G155837 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G155836 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.16 x 10-10 | 555 | 156 | 358 | 285 | 78.06% | 44.32% | 711 | 643 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.16e-10' χ2 p-value for Mo17 x B73: '2.83e-33' Biased in favor of strain: 'B73' |
||||
| GRMZM2G155836 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.13 x 10-15 | 534 | 175 | 396 | 202 | 75.32% | 33.78% | 709 | 598 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.13e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G155822 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.12268 x 10-2 | 12 | 3 | 17 | 7 | 80.00% | 29.17% | 15 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0201368' χ2 p-value for Mo17 x B73: '.0412268' Biased in favor of strain: 'B73' |
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| GRMZM2G155822 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.386 x 10-4 | 13 | 33 | 10 | 65 | 28.26% | 86.67% | 46 | 75 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.28e-08' χ2 p-value for Mo17 x B73: '.0002386' Biased in favor of strain: 'Mo17' |
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| GRMZM2G155816 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G155816 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.301393 x 10-1 | 107 | 80 | 56 | 44 | 57.22% | 44.00% | 187 | 100 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0483322' χ2 p-value for Mo17 x B73: '.2301393' Biased in favor of strain: '' |
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| GRMZM2G155776 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.93 x 10-5 | 321 | 205 | 244 | 160 | 61.03% | 39.60% | 526 | 404 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.24e-07' χ2 p-value for Mo17 x B73: '.0000293' Biased in favor of strain: 'B73' |
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| GRMZM2G155776 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.61665 x 10-2 | 110 | 36 | 110 | 78 | 75.34% | 41.49% | 146 | 188 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0261665' χ2 p-value for Mo17 x B73: '2.42e-13' Biased in favor of strain: '' |
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| GRMZM2G155753 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
|||||||
| GRMZM2G155753 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 6 | 1 | 100.00% | 14.29% | 5 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: '' |
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| GRMZM2G155709 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.86 x 10-26 | 2033 | 1417 | 2113 | 1379 | 58.93% | 39.49% | 3450 | 3492 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.86e-26' χ2 p-value for Mo17 x B73: '2.01e-35' Biased in favor of strain: 'B73' |
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| GRMZM2G155709 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.3927 x 10-3 | 764 | 308 | 744 | 386 | 71.27% | 34.16% | 1072 | 1130 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0013927' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G155686 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G155686 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 17 | 17 | 5 | 9 | 50.00% | 64.29% | 34 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.2850494' Biased in favor of strain: '' |
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| GRMZM2G155662 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.75 x 10-10 | 1450 | 1083 | 1458 | 1142 | 57.24% | 43.92% | 2533 | 2600 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.05e-13' χ2 p-value for Mo17 x B73: '5.75e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G155662 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.51 x 10-8 | 964 | 279 | 524 | 775 | 77.55% | 59.66% | 1243 | 1299 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.87e-16' χ2 p-value for Mo17 x B73: '8.51e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G155626 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.28935 x 10-2 | 55 | 13 | 37 | 20 | 80.88% | 35.09% | 68 | 57 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0128935' χ2 p-value for Mo17 x B73: '4.25e-07' Biased in favor of strain: '' |
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| GRMZM2G155626 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.12 x 10-7 | 81 | 29 | 100 | 29 | 73.64% | 22.48% | 110 | 129 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.12e-07' χ2 p-value for Mo17 x B73: '4.07e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G155593 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.198787 x 10-1 | 191 | 214 | 194 | 187 | 47.16% | 49.08% | 405 | 381 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2530887' χ2 p-value for Mo17 x B73: '.7198787' Biased in favor of strain: '' |
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| GRMZM2G155593 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.1898 x 10-3 | 22 | 1 | 15 | 4 | 95.65% | 21.05% | 23 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0031898' χ2 p-value for Mo17 x B73: '.0000247' Biased in favor of strain: 'B73' |
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| GRMZM2G155565 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G155565 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 11 | 6 | 3 | 35.29% | 33.33% | 17 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2252529' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G155555 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 4 | 0 | 100.00% | 0.00% | 3 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G155555 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 3 | 5 | 100.00% | 62.50% | 1 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.8025872' Biased in favor of strain: '' |
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| GRMZM2G155546 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 7 | 100.00% | 0 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G155546 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.451204 x 10-1 | 125 | 103 | 195 | 102 | 54.82% | 34.34% | 228 | 297 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1451204' χ2 p-value for Mo17 x B73: '6.80e-08' Biased in favor of strain: '' |
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| GRMZM2G155543 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2321 | 957 | 2091 | 1077 | 70.81% | 34.00% | 3278 | 3168 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G155543 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2420 | 444 | 1041 | 617 | 84.50% | 37.21% | 2864 | 1658 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G155532 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.3216 x 10-3 | 82 | 21 | 58 | 52 | 79.61% | 47.27% | 103 | 110 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0053216' χ2 p-value for Mo17 x B73: '.000016' Biased in favor of strain: 'B73' |
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| GRMZM2G155532 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.32 x 10-8 | 163 | 44 | 119 | 46 | 78.74% | 27.88% | 207 | 165 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.33e-16' χ2 p-value for Mo17 x B73: '1.32e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G155512 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.86403 x 10-1 | 29 | 23 | 24 | 25 | 55.77% | 51.02% | 52 | 49 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4053805' χ2 p-value for Mo17 x B73: '.886403' Biased in favor of strain: '' |
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| GRMZM2G155512 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.815115 x 10-1 | 18 | 7 | 8 | 18 | 72.00% | 69.23% | 25 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5716225' χ2 p-value for Mo17 x B73: '.7815115' Biased in favor of strain: '' |
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| GRMZM2G155503 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 1 | 0 | 100.00% | 0.00% | 8 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G155503 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 6 | 0 | 100.00% | 0.00% | 9 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G155502 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.42174 x 10-1 | 113 | 118 | 109 | 171 | 48.92% | 61.07% | 231 | 280 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.742174' χ2 p-value for Mo17 x B73: '.0002112' Biased in favor of strain: '' |
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| GRMZM2G155502 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.25095 x 10-2 | 50 | 4 | 4 | 24 | 92.59% | 85.71% | 54 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000531' χ2 p-value for Mo17 x B73: '.0325095' Biased in favor of strain: '' |
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| GRMZM2G155499 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G155499 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G155464 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G155464 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 2 | 3 | 0 | 71.43% | 0.00% | 7 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2568392' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G155437 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.086006 x 10-1 | 29 | 18 | 33 | 15 | 61.70% | 31.25% | 47 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1086006' χ2 p-value for Mo17 x B73: '.0093748' Biased in favor of strain: '' |
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| GRMZM2G155437 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.545393 x 10-1 | 0 | 15 | 9 | 12 | 0.00% | 57.14% | 15 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.32e-08' χ2 p-value for Mo17 x B73: '.3545393' Biased in favor of strain: '' |
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| GRMZM2G155422 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.170551 x 10-1 | 20 | 12 | 22 | 5 | 62.50% | 18.52% | 32 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170551' χ2 p-value for Mo17 x B73: '1.11e-07' Biased in favor of strain: '' |
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| GRMZM2G155422 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.336144 x 10-1 | 38 | 26 | 69 | 50 | 59.38% | 42.02% | 64 | 119 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1336144' χ2 p-value for Mo17 x B73: '.0815562' Biased in favor of strain: '' |
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| GRMZM2G155387 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.246027 x 10-1 | 204 | 128 | 145 | 120 | 61.45% | 45.28% | 332 | 265 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000303' χ2 p-value for Mo17 x B73: '.1246027' Biased in favor of strain: '' |
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| GRMZM2G155387 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.186045 x 10-1 | 221 | 74 | 95 | 175 | 74.92% | 64.81% | 295 | 270 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026533' χ2 p-value for Mo17 x B73: '.5186045' Biased in favor of strain: '' |
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| GRMZM2G155384 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.03 x 10-10 | 537 | 153 | 393 | 505 | 77.83% | 56.24% | 690 | 898 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.03e-10' χ2 p-value for Mo17 x B73: '3.34e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G155384 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.37 x 10-5 | 1061 | 875 | 908 | 728 | 54.80% | 44.50% | 1936 | 1636 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000237' χ2 p-value for Mo17 x B73: '8.58e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G155375 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.681447 x 10-1 | 128 | 114 | 85 | 103 | 52.89% | 54.79% | 242 | 188 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3681447' χ2 p-value for Mo17 x B73: '.1892554' Biased in favor of strain: '' |
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| GRMZM2G155375 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.92296 x 10-2 | 108 | 32 | 62 | 91 | 77.14% | 59.48% | 140 | 153 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0085522' χ2 p-value for Mo17 x B73: '.0592296' Biased in favor of strain: '' |
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| GRMZM2G155357 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.437251 x 10-1 | 157 | 89 | 88 | 149 | 63.82% | 62.87% | 246 | 237 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3437251' χ2 p-value for Mo17 x B73: '.2149192' Biased in favor of strain: '' |
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| GRMZM2G155357 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.448816 x 10-1 | 44 | 41 | 23 | 31 | 51.76% | 57.41% | 85 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7448816' χ2 p-value for Mo17 x B73: '.2763029' Biased in favor of strain: '' |
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| GRMZM2G155343 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.4 x 10-7 | 269 | 163 | 310 | 149 | 62.27% | 32.46% | 432 | 459 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.40e-07' χ2 p-value for Mo17 x B73: '5.70e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G155343 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 1.7015 x 10-3 | 62 | 55 | 54 | 31 | 52.99% | 36.47% | 117 | 85 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0017015' χ2 p-value for Mo17 x B73: '3.51e-09' Biased in favor of strain: '' |
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| GRMZM2G155341 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.61589 x 10-2 | 141 | 111 | 81 | 127 | 55.95% | 61.06% | 252 | 208 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003084' χ2 p-value for Mo17 x B73: '.0861589' Biased in favor of strain: '' |
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| GRMZM2G155341 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.613568 x 10-1 | 153 | 137 | 117 | 106 | 52.76% | 47.53% | 290 | 223 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3474472' χ2 p-value for Mo17 x B73: '.4613568' Biased in favor of strain: '' |
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| GRMZM2G155340 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.65 x 10-16 | 217 | 70 | 254 | 101 | 75.61% | 28.45% | 287 | 355 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.06e-18' χ2 p-value for Mo17 x B73: '4.65e-16' Biased in favor of strain: 'B73' |
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| GRMZM2G155340 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G155334 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 1 | 1 | 0.00% | 50.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: '' |
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| GRMZM2G155334 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G155332 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.12 x 10-6 | 112 | 40 | 87 | 37 | 73.68% | 29.84% | 152 | 124 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.22e-09' χ2 p-value for Mo17 x B73: '7.12e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G155332 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 2.1798 x 10-3 | 34 | 35 | 57 | 46 | 49.28% | 44.66% | 69 | 103 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0021798' χ2 p-value for Mo17 x B73: '2.16e-06' Biased in favor of strain: '' |
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| GRMZM2G155329 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.716225 x 10-1 | 18 | 7 | 17 | 12 | 72.00% | 41.38% | 25 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5716225' χ2 p-value for Mo17 x B73: '.0038679' Biased in favor of strain: '' |
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| GRMZM2G155329 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.23546 x 10-2 | 104 | 40 | 67 | 41 | 72.22% | 37.96% | 144 | 108 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.64e-08' χ2 p-value for Mo17 x B73: '.0123546' Biased in favor of strain: 'B73' |
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| GRMZM2G155323 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.66 x 10-23 | 843 | 356 | 749 | 409 | 70.31% | 35.32% | 1199 | 1158 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.66e-23' Biased in favor of strain: 'B73' |
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| GRMZM2G155323 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2445 | 430 | 1375 | 717 | 85.04% | 34.27% | 2875 | 2092 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G155321 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | maternally biased | 5.4791 x 10-3 | 68 | 16 | 18 | 102 | 80.95% | 85.00% | 84 | 120 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0054791' χ2 p-value for Mo17 x B73: '.0000204' Biased in favor of strain: '' |
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| GRMZM2G155321 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.55807 x 10-2 | 163 | 114 | 147 | 177 | 58.84% | 54.63% | 277 | 324 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0032387' χ2 p-value for Mo17 x B73: '.0955807' Biased in favor of strain: '' |
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| GRMZM2G155317 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.399535 x 10-1 | 307 | 292 | 200 | 180 | 51.25% | 47.37% | 599 | 380 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5399535' χ2 p-value for Mo17 x B73: '.3049018' Biased in favor of strain: '' |
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| GRMZM2G155317 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.62038 x 10-2 | 215 | 85 | 99 | 80 | 71.67% | 44.69% | 300 | 179 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0662038' χ2 p-value for Mo17 x B73: '4.47e-10' Biased in favor of strain: '' |
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| GRMZM2G155314 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 1 | 6 | 7 | 85.71% | 53.85% | 7 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2850535' χ2 p-value for Mo17 x B73: '.3267995' Biased in favor of strain: '' |
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| GRMZM2G155314 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 12 | 12 | 7 | 12 | 50.00% | 63.16% | 24 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.2513491' Biased in favor of strain: '' |
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| GRMZM2G155312 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.226003 x 10-1 | 122 | 96 | 103 | 82 | 55.96% | 44.32% | 218 | 185 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0782482' χ2 p-value for Mo17 x B73: '.1226003' Biased in favor of strain: '' |
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| GRMZM2G155312 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.156585 x 10-1 | 133 | 37 | 80 | 139 | 78.24% | 63.47% | 170 | 219 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0013758' χ2 p-value for Mo17 x B73: '.3156585' Biased in favor of strain: '' |
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| GRMZM2G155285 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.7048 x 10-2 | 153 | 57 | 78 | 99 | 72.86% | 55.93% | 210 | 177 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.057048' χ2 p-value for Mo17 x B73: '.0024495' Biased in favor of strain: '' |
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| GRMZM2G155285 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.9711 x 10-3 | 101 | 64 | 116 | 55 | 61.21% | 32.16% | 165 | 171 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0039711' χ2 p-value for Mo17 x B73: '3.09e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G155281 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2403 | 587 | 2580 | 774 | 80.37% | 23.08% | 2990 | 3354 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G155281 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 7179 | 1442 | 3191 | 2518 | 83.27% | 44.11% | 8621 | 5709 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G155260 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G155260 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 3 | 0 | 100.00% | 0.00% | 2 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G155252 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.561 x 10-4 | 223 | 100 | 201 | 132 | 69.04% | 39.64% | 323 | 333 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.71e-12' χ2 p-value for Mo17 x B73: '.0001561' Biased in favor of strain: 'B73' |
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| GRMZM2G155252 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.78543 x 10-2 | 72 | 8 | 54 | 143 | 90.00% | 72.59% | 80 | 197 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.55e-06' χ2 p-value for Mo17 x B73: '.0778543' Biased in favor of strain: '' |
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| GRMZM2G155242 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.881288 x 10-1 | 68 | 33 | 61 | 102 | 67.33% | 62.58% | 101 | 163 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8881288' χ2 p-value for Mo17 x B73: '.2679922' Biased in favor of strain: '' |
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| GRMZM2G155242 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.757 x 10-4 | 946 | 800 | 969 | 811 | 54.18% | 45.56% | 1746 | 1780 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004757' χ2 p-value for Mo17 x B73: '.0001804' Biased in favor of strain: 'B73' |
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| GRMZM2G155232 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.75 x 10-18 | 10 | 101 | 6 | 126 | 9.01% | 95.45% | 111 | 132 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.75e-18' χ2 p-value for Mo17 x B73: '1.55e-25' Biased in favor of strain: 'Mo17' |
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| GRMZM2G155232 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.92 x 10-27 | 67 | 217 | 44 | 413 | 23.59% | 90.37% | 284 | 457 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '5.92e-27' Biased in favor of strain: 'Mo17' |
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| GRMZM2G155220 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.178241 x 10-1 | 31 | 16 | 32 | 25 | 65.96% | 43.86% | 47 | 57 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9178241' χ2 p-value for Mo17 x B73: '.0002595' Biased in favor of strain: '' |
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| GRMZM2G155220 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.373519 x 10-1 | 9 | 5 | 10 | 8 | 64.29% | 44.44% | 14 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2850494' χ2 p-value for Mo17 x B73: '.6373519' Biased in favor of strain: '' |