Displaying data sets 132401 - 132500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G69410 ELF5A-3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '205.486'
Avg. embryo expression (LCM): '141.372'
AT1G69410 ELF5A-3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 1 3 0.00% 75.00% 1 4 TAIR8 Avg. embryo expression (dissected): '16.5537'
Avg. embryo expression (LCM): '21.6887'
AT1G69400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 2 1 2 33.33% 66.67% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.669921'
Avg. expression score for this sample: '7.82028'
Avg. expression score in LCM sample: '4.83561'
Tissue used: 'full endosperm'
AT1G69400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 3 0 2 0.00% 100.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.669921'
Avg. expression score for this sample: '7.86263'
Avg. expression score in LCM sample: '4.83561'
Tissue used: 'pure endosperm, no chalazal'
AT1G69400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69390 MINE1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69390 MINE1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69390 MINE1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '59.9356'
Avg. expression score in LCM sample: '25.736'
Tissue used: 'full endosperm'
AT1G69390 MINE1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '61.7071'
Avg. expression score in LCM sample: '25.736'
Tissue used: 'pure endosperm, no chalazal'
AT1G69390 MINE1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '62.3519'
Avg. embryo expression (LCM): '84.0671'
AT1G69390 MINE1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69380 RRG endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69380 RRG embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '33.0048'
Avg. embryo expression (LCM): '72.6011'
AT1G69380 RRG endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.6982'
Avg. expression score in LCM sample: '19.2249'
Tissue used: 'pure endosperm, no chalazal'
AT1G69380 RRG endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69380 RRG endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69380 RRG endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.8691'
Avg. expression score in LCM sample: '19.2249'
Tissue used: 'full endosperm'
AT1G69370 CM3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '48.2369'
Avg. expression score in LCM sample: '37.4797'
Tissue used: 'full endosperm'
AT1G69370 CM3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69370 CM3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '51.9598'
Avg. expression score in LCM sample: '37.4797'
Tissue used: 'pure endosperm, no chalazal'
AT1G69370 CM3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69370 CM3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '27.0009'
Avg. embryo expression (LCM): '17.0169'
AT1G69370 CM3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.13327 x 10-1 49 18 73.13% 67 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 13 1 10 27.78% 90.91% 18 11 TAIR8 Avg. embryo expression (dissected): '37.6581'
Avg. embryo expression (LCM): '38.5799'
AT1G69360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.31272 x 10-1 31 7 81.58% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.293 x 10-3 66 4 94.29% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.9 x 10-4 39 8 13 83 82.98% 86.46% 47 96 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009264'
Avg. expression score for this sample: '75.4157'
Avg. expression score in LCM sample: '102.048'
Tissue used: 'full endosperm'
AT1G69360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 12 24 6 47 33.33% 88.68% 36 53 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009264'
Avg. expression score for this sample: '83.1536'
Avg. expression score in LCM sample: '102.048'
Tissue used: 'pure endosperm, no chalazal'
AT1G69350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '27.1361'
Avg. expression score in LCM sample: '5.59991'
Tissue used: 'pure endosperm, no chalazal'
AT1G69350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.2447'
Avg. expression score in LCM sample: '5.59991'
Tissue used: 'full endosperm'
AT1G69350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '38.1285'
Avg. embryo expression (LCM): '34.5486'
AT1G69350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.38462 x 10-1 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 3 0 0 0 100.00% 3 0 TAIR8 Avg. embryo expression (dissected): '70.4991'
Avg. embryo expression (LCM): '49.3678'
AT1G69340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 2 1 5 66.67% 83.33% 6 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.681659'
Avg. expression score for this sample: '101.537'
Avg. expression score in LCM sample: '62.716'
Tissue used: 'full endosperm'
AT1G69340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.39474 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.681659'
Avg. expression score for this sample: '78.6082'
Avg. expression score in LCM sample: '62.716'
Tissue used: 'pure endosperm, no chalazal'
AT1G69340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '91.8073'
Avg. expression score in LCM sample: '92.1265'
Tissue used: 'full endosperm'
AT1G69330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '114.319'
Avg. expression score in LCM sample: '92.1265'
Tissue used: 'pure endosperm, no chalazal'
AT1G69330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '104.024'
Avg. embryo expression (LCM): '118.993'
AT1G69330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69325 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69325 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '19.9132'
Avg. embryo expression (LCM): '17.4439'
AT1G69325 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.1908'
Avg. expression score in LCM sample: '12.2434'
Tissue used: 'pure endosperm, no chalazal'
AT1G69325 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69325 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69325 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.44654'
Avg. expression score in LCM sample: '12.2434'
Tissue used: 'full endosperm'
AT1G69320 CLE10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.811325'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G69320 CLE10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69320 CLE10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.393273'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G69320 CLE10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69320 CLE10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G69320 CLE10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69310 WRKY57 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6 x 10-15 1041 13 98.77% 1054 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69310 WRKY57 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.96107 x 10-1 1 7 6 16 12.50% 72.73% 8 22 TAIR8 Avg. embryo expression (dissected): '16.1852'
Avg. embryo expression (LCM): '18.5365'
AT1G69310 WRKY57 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.25609 x 10-1 61 2 96.83% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69310 WRKY57 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 x 10-10 334 87 79.33% 421 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69310 WRKY57 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 433 32 17 494 93.12% 96.67% 465 511 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '167.545'
Avg. expression score in LCM sample: '3.24824'
Tissue used: 'full endosperm'
AT1G69310 WRKY57 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.81975 x 10-1 59 34 5 2 63.44% 28.57% 93 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '20.8461'
Avg. expression score in LCM sample: '3.24824'
Tissue used: 'pure endosperm, no chalazal'
AT1G69300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G69300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G69300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G69300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69295 PDCB4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1269 36 97.24% 1305 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69295 PDCB4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.9183 x 10-2 386 337 131 165 53.39% 55.74% 723 296 TAIR8 Avg. embryo expression (dissected): '275.093'
Avg. embryo expression (LCM): '178.985'
AT1G69295 PDCB4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.0325 x 10-2 824 296 210 380 73.57% 64.41% 1120 590 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.083367'
Avg. expression score for this sample: '209.216'
Avg. expression score in LCM sample: '131.796'
Tissue used: 'full endosperm'
AT1G69295 PDCB4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8 x 10-9 179 26 87.32% 205 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69295 PDCB4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.41184 x 10-1 586 275 392 770 68.06% 66.27% 861 1162 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.083367'
Avg. expression score for this sample: '332.411'
Avg. expression score in LCM sample: '131.796'
Tissue used: 'pure endosperm, no chalazal'
AT1G69295 PDCB4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.68651 x 10-1 155 79 66.24% 234 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.02233 x 10-1 11 7 61.11% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.6743 x 10-2 103 74 58.19% 177 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.64563 x 10-1 133 22 54 41 85.81% 43.16% 155 95 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.714865'
Avg. expression score for this sample: '52.3685'
Avg. expression score in LCM sample: '14.8743'
Tissue used: 'full endosperm'
AT1G69290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.19363 x 10-1 34 13 20 6 72.34% 23.08% 47 26 TAIR8 Avg. embryo expression (dissected): '55.1047'
Avg. embryo expression (LCM): '49.5687'
AT1G69290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-14 377 34 91.73% 411 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.66128 x 10-1 10 3 7 4 76.92% 36.36% 13 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.714865'
Avg. expression score for this sample: '23.1236'
Avg. expression score in LCM sample: '14.8743'
Tissue used: 'pure endosperm, no chalazal'
AT1G69280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.95103 x 10-1 37 5 8 4 88.10% 33.33% 42 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005067'
Avg. expression score for this sample: '16.0815'
Avg. expression score in LCM sample: '6.98151'
Tissue used: 'pure endosperm, no chalazal'
AT1G69280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.333 x 10-3 96 11 22 35 89.72% 61.40% 107 57 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005067'
Avg. expression score for this sample: '27.2885'
Avg. expression score in LCM sample: '6.98151'
Tissue used: 'full endosperm'
AT1G69280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.7887 x 10-2 62 29 68.13% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.268 x 10-2 6 7 46.15% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.32 x 10-3 239 29 89.18% 268 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.72023 x 10-1 35 20 17 5 63.64% 22.73% 55 22 TAIR8 Avg. embryo expression (dissected): '45.3477'
Avg. embryo expression (LCM): '33.0165'
AT1G69270 RPK1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 16 16 6 8 50.00% 57.14% 32 14 TAIR8 Avg. embryo expression (dissected): '42.3616'
Avg. embryo expression (LCM): '31.1955'
AT1G69270 RPK1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.2 x 10-7 62 2 96.88% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69270 RPK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.67006 x 10-1 15 3 7 16 83.33% 69.57% 18 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '21.1659'
Avg. expression score in LCM sample: '14.6097'
Tissue used: 'pure endosperm, no chalazal'
AT1G69270 RPK1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 9 4 69.23% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69270 RPK1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.1176 x 10-2 55 15 78.57% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G69270 RPK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.04111 x 10-1 27 19 32 66 58.70% 67.35% 46 98 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '35.255'
Avg. expression score in LCM sample: '14.6097'
Tissue used: 'full endosperm'
AT1G69260 AFP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.98482 x 10-1 11 5 5 15 68.75% 75.00% 16 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '13.5293'
Avg. expression score in LCM sample: '6.07024'
Tissue used: 'full endosperm'
AT1G69260 AFP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.21442 x 10-1 430 121 78.04% 551 TAIR8 Mutant effect: 'N/A (not a MEG)'