Displaying data sets 131801 - 131900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G70290 TPS8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.71159 x 10-1 28 29 7 11 49.12% 61.11% 57 18 TAIR8 Avg. embryo expression (dissected): '64.697'
Avg. embryo expression (LCM): '6.6686'
AT1G70290 TPS8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.336 x 10-3 25 0 1 10 100.00% 90.91% 25 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.6e-37'
Avg. expression score for this sample: '20.4291'
Avg. expression score in LCM sample: '4.87971'
Tissue used: 'pure endosperm, no chalazal'
AT1G70280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.73925 x 10-1 53 22 33 74 70.67% 69.16% 75 107 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.732143'
Avg. expression score for this sample: '64.5166'
Avg. expression score in LCM sample: '126.27'
Tissue used: 'pure endosperm, no chalazal'
AT1G70280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.90228 x 10-1 24 17 34 47 58.54% 58.02% 41 81 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.732143'
Avg. expression score for this sample: '40.6521'
Avg. expression score in LCM sample: '126.27'
Tissue used: 'full endosperm'
AT1G70280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.37168 x 10-1 69 40 21 14 63.30% 40.00% 109 35 TAIR8 Avg. embryo expression (dissected): '86.8678'
Avg. embryo expression (LCM): '93.7121'
AT1G70280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.0 x 10-8 91 8 91.92% 99 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.49532 x 10-1 2 3 40.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.0775 x 10-2 16 2 88.89% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '2.72521'
AT1G70270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G70270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.363323'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G70260 UMAMIT36 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.114786'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G70260 UMAMIT36 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G70260 UMAMIT36 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G70260 UMAMIT36 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70260 UMAMIT36 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70260 UMAMIT36 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 12 4 75.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.29223 x 10-1 16 2 88.89% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 3 6 33.33% 66.67% 3 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.51124'
Avg. expression score for this sample: '3.01885'
Avg. expression score in LCM sample: '.617312'
Tissue used: 'pure endosperm, no chalazal'
AT1G70250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.71318 x 10-1 23 13 6 34 63.89% 85.00% 36 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.51124'
Avg. expression score for this sample: '12.8461'
Avg. expression score in LCM sample: '.617312'
Tissue used: 'full endosperm'
AT1G70250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 2 0 1 50.00% 100.00% 4 1 TAIR8 Avg. embryo expression (dissected): '1.39656'
Avg. embryo expression (LCM): '1.04236'
AT1G70230 TBL27 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '7.06138'
Avg. embryo expression (LCM): '3.89316'
AT1G70230 TBL27 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.90643'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G70230 TBL27 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.224198'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G70230 TBL27 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70230 TBL27 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70230 TBL27 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.04583'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G70220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.53878'
Avg. embryo expression (LCM): '4.35783'
AT1G70220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.97852'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G70210 CYCD1;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 13 3 4 0 81.25% 0.00% 16 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.78917'
Avg. expression score for this sample: '26.6361'
Avg. expression score in LCM sample: '27.735'
Tissue used: 'pure endosperm, no chalazal'
AT1G70210 CYCD1;1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.09859 x 10-1 1 1 4 4 50.00% 50.00% 2 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.78917'
Avg. expression score for this sample: '13.843'
Avg. expression score in LCM sample: '27.735'
Tissue used: 'full endosperm'
AT1G70210 CYCD1;1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.83247 x 10-1 31 12 14 3 72.09% 17.65% 43 17 TAIR8 Avg. embryo expression (dissected): '158.847'
Avg. embryo expression (LCM): '154.018'
AT1G70210 CYCD1;1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70210 CYCD1;1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.19355 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70210 CYCD1;1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.77365 x 10-1 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70209 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70209 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70209 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70209 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.20585'
Avg. embryo expression (LCM): '0'
AT1G70209 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G70209 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G70200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.20715 x 10-1 54 27 50 95 66.67% 65.52% 81 145 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.554017'
Avg. expression score for this sample: '112.519'
Avg. expression score in LCM sample: '21.8999'
Tissue used: 'full endosperm'
AT1G70200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.81516 x 10-1 99 89 24 22 52.66% 47.83% 188 46 TAIR8 Avg. embryo expression (dissected): '282.346'
Avg. embryo expression (LCM): '317.468'
AT1G70200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.22526 x 10-1 28 23 11 21 54.90% 65.62% 51 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.554017'
Avg. expression score for this sample: '71.0195'
Avg. expression score in LCM sample: '21.8999'
Tissue used: 'pure endosperm, no chalazal'
AT1G70200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.26054 x 10-1 10 2 83.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.00614 x 10-1 117 46 71.78% 163 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.2 x 10-6 136 25 84.47% 161 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-10 217 21 91.18% 238 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.14206 x 10-1 32 21 60.38% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.50769 x 10-1 153 51 75.00% 204 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 54 26 19 37 67.50% 66.07% 80 56 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.144172'
Avg. expression score for this sample: '207.475'
Avg. expression score in LCM sample: '109.352'
Tissue used: 'pure endosperm, no chalazal'
AT1G70190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.2565 x 10-2 106 29 65 147 78.52% 69.34% 135 212 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.144172'
Avg. expression score for this sample: '380.811'
Avg. expression score in LCM sample: '109.352'
Tissue used: 'full endosperm'
AT1G70190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.98519 x 10-1 94 69 12 5 57.67% 29.41% 163 17 TAIR8 Avg. embryo expression (dissected): '296.236'
Avg. embryo expression (LCM): '427.117'
AT1G70185 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '1.7281'
Avg. embryo expression (LCM): '0'
AT1G70185 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G70185 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.57436'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G70185 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 4 20.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70185 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70185 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.37728 x 10-1 31 6 83.78% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.71109 x 10-1 150 44 77.32% 194 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.8868 x 10-2 191 48 79.92% 239 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.453 x 10-3 105 26 52 148 80.15% 74.00% 131 200 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.024927'
Avg. expression score for this sample: '136.202'
Avg. expression score in LCM sample: '66.464'
Tissue used: 'full endosperm'
AT1G70180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.31499 x 10-1 29 26 5 7 52.73% 58.33% 55 12 TAIR8 Avg. embryo expression (dissected): '121.851'
Avg. embryo expression (LCM): '101.323'
AT1G70180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 31 20 14 33 60.78% 70.21% 51 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.024927'
Avg. expression score for this sample: '122.356'
Avg. expression score in LCM sample: '66.464'
Tissue used: 'pure endosperm, no chalazal'
AT1G70170 MMP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.351559'
Avg. expression score in LCM sample: '1.98422'
Tissue used: 'pure endosperm, no chalazal'
AT1G70170 MMP endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.0299'
Avg. expression score in LCM sample: '1.98422'
Tissue used: 'full endosperm'
AT1G70170 MMP embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G70170 MMP endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70170 MMP endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70170 MMP endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.904 x 10-3 85 10 89.47% 95 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.2 x 10-10 138 3 97.87% 141 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.7824 x 10-2 37 4 90.24% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 36 41 8 15 46.75% 65.22% 77 23 TAIR8 Avg. embryo expression (dissected): '227.907'
Avg. embryo expression (LCM): '121.165'
AT1G70160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.15022 x 10-1 63 23 18 46 73.26% 71.88% 86 64 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005154'
Avg. expression score for this sample: '180.27'
Avg. expression score in LCM sample: '107.295'
Tissue used: 'pure endosperm, no chalazal'
AT1G70160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.02 x 10-3 75 12 22 65 86.21% 74.71% 87 87 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005154'
Avg. expression score for this sample: '268.492'
Avg. expression score in LCM sample: '107.295'
Tissue used: 'full endosperm'
AT1G70150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 6 2 7 62.50% 77.78% 16 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.40917'
Avg. expression score in LCM sample: '2.54274'
Tissue used: 'full endosperm'
AT1G70150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 3 0 3 25.00% 100.00% 4 3 TAIR8 Avg. embryo expression (dissected): '9.5795'
Avg. embryo expression (LCM): '8.70309'
AT1G70150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.90273'
Avg. expression score in LCM sample: '2.54274'
Tissue used: 'pure endosperm, no chalazal'
AT1G70150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.91051 x 10-1 16 3 84.21% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.04026 x 10-1 20 3 86.96% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70140 FH8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 3933 12 99.70% 3945 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70140 FH8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.1616 x 10-2 345 33 91.27% 378 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70140 FH8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.5 x 10-29 2105 12 99.43% 2117 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70140 FH8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.5 x 10-25 373 18 62 277 95.40% 81.71% 391 339 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '126.436'
Avg. expression score in LCM sample: '11.3321'
Tissue used: 'pure endosperm, no chalazal'
AT1G70140 FH8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1280 47 115 2135 96.46% 94.89% 1327 2250 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '403.67'
Avg. expression score in LCM sample: '11.3321'
Tissue used: 'full endosperm'
AT1G70140 FH8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.9 x 10-5 24 2 2 13 92.31% 86.67% 26 15 TAIR8 Avg. embryo expression (dissected): '16.2577'
Avg. embryo expression (LCM): '3.56664'
AT1G70130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.147446'
Avg. embryo expression (LCM): '0'
AT1G70130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.010896'
Avg. expression score for this sample: '1.43664'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'