Displaying data sets 131701 - 131800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G70450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.739358'
Avg. embryo expression (LCM): '0'
AT1G70450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G70450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G70450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70440 SRO3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.67421 x 10-1 58 1 98.31% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70440 SRO3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.5 x 10-7 53 0 5 38 100.00% 88.37% 53 43 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.6e-06'
Avg. expression score for this sample: '61.1339'
Avg. expression score in LCM sample: '1.32281'
Tissue used: 'full endosperm'
AT1G70440 SRO3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1636 x 10-1 34 0 100.00% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70440 SRO3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '.933055'
Avg. embryo expression (LCM): '0'
AT1G70440 SRO3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 2 2 6 71.43% 75.00% 7 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.6e-06'
Avg. expression score for this sample: '7.23766'
Avg. expression score in LCM sample: '1.32281'
Tissue used: 'pure endosperm, no chalazal'
AT1G70440 SRO3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.91588 x 10-1 10 2 83.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.67305'
Avg. expression score in LCM sample: '13.2869'
Tissue used: 'pure endosperm, no chalazal'
AT1G70430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.61813'
Avg. expression score in LCM sample: '13.2869'
Tissue used: 'full endosperm'
AT1G70430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '10.8865'
Avg. embryo expression (LCM): '7.81143'
AT1G70430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.01836 x 10-1 13 1 92.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 10 7 2 1 58.82% 33.33% 17 3 TAIR8 Avg. embryo expression (dissected): '7.53196'
Avg. embryo expression (LCM): '2.10984'
AT1G70420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.05483 x 10-1 8 3 1 12 72.73% 92.31% 11 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.14137'
Avg. expression score for this sample: '4.99868'
Avg. expression score in LCM sample: '1.23462'
Tissue used: 'pure endosperm, no chalazal'
AT1G70420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.2563 x 10-1 10 5 66.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.8419 x 10-2 37 4 90.24% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.25399 x 10-1 28 15 8 38 65.12% 82.61% 43 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.14137'
Avg. expression score for this sample: '16.5474'
Avg. expression score in LCM sample: '1.23462'
Tissue used: 'full endosperm'
AT1G70410 BCA4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '12.7292'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G70410 BCA4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70410 BCA4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.23436'
Avg. embryo expression (LCM): '0'
AT1G70410 BCA4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70410 BCA4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70410 BCA4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.70033'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G70400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.980146'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G70400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.7646'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G70400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.88703'
Avg. embryo expression (LCM): '0'
AT1G70390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.49335'
Avg. embryo expression (LCM): '0'
AT1G70390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 16 0 100.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.6e-08'
Avg. expression score for this sample: '40.4562'
Avg. expression score in LCM sample: '60.4378'
Tissue used: 'pure endosperm, no chalazal'
AT1G70390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.3 x 10-8 48 0 1 25 100.00% 96.15% 48 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.6e-08'
Avg. expression score for this sample: '467.3'
Avg. expression score in LCM sample: '60.4378'
Tissue used: 'full endosperm'
AT1G70390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 75 2 97.40% 77 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.0226 x 10-2 2 0 0 9 100.00% 100.00% 2 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.047826'
Avg. expression score for this sample: '65.8272'
Avg. expression score in LCM sample: '5.18836'
Tissue used: 'full endosperm'
AT1G70380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.256241'
Avg. embryo expression (LCM): '0'
AT1G70380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.047826'
Avg. expression score for this sample: '3.19007'
Avg. expression score in LCM sample: '5.18836'
Tissue used: 'pure endosperm, no chalazal'
AT1G70380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70370 PG2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.20911 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70370 PG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 5 3 10 50.00% 76.92% 10 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.604047'
Avg. expression score for this sample: '179.598'
Avg. expression score in LCM sample: '60.673'
Tissue used: 'pure endosperm, no chalazal'
AT1G70370 PG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.4073 23 9 5 19 71.88% 79.17% 32 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.604047'
Avg. expression score for this sample: '175.107'
Avg. expression score in LCM sample: '60.673'
Tissue used: 'full endosperm'
AT1G70370 PG2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3 x 10-8 119 2 98.35% 121 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70370 PG2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.21769 x 10-1 24 16 2 7 60.00% 77.78% 40 9 TAIR8 Avg. embryo expression (dissected): '406.488'
Avg. embryo expression (LCM): '177.428'
AT1G70370 PG2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.556 x 10-3 92 11 89.32% 103 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 56 24 70.00% 80 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 14 16 2 5 46.67% 71.43% 30 7 TAIR8 Avg. embryo expression (dissected): '224.665'
Avg. embryo expression (LCM): '132.066'
AT1G70360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.70012 x 10-1 25 10 9 31 71.43% 77.50% 35 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.474433'
Avg. expression score for this sample: '252.066'
Avg. expression score in LCM sample: '134.897'
Tissue used: 'pure endosperm, no chalazal'
AT1G70360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.16275 x 10-1 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.874 x 10-3 59 9 86.76% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.36494 x 10-1 61 28 40 85 68.54% 68.00% 89 125 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.474433'
Avg. expression score for this sample: '358.596'
Avg. expression score in LCM sample: '134.897'
Tissue used: 'full endosperm'
AT1G70350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.81504 x 10-1 3 6 6 13 33.33% 68.42% 9 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.78917'
Avg. expression score for this sample: '42.5603'
Avg. expression score in LCM sample: '10.4061'
Tissue used: 'full endosperm'
AT1G70350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7183 x 10-2 24 3 88.89% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 6 1 0 45.45% 0.00% 11 1 TAIR8 Avg. embryo expression (dissected): '120.781'
Avg. embryo expression (LCM): '153.365'
AT1G70350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 18 12 60.00% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.16129 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.78917'
Avg. expression score for this sample: '47.5314'
Avg. expression score in LCM sample: '10.4061'
Tissue used: 'pure endosperm, no chalazal'
AT1G70340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '22.1179'
Avg. expression score in LCM sample: '23.0463'
Tissue used: 'pure endosperm, no chalazal'
AT1G70340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '24.9766'
Avg. expression score in LCM sample: '23.0463'
Tissue used: 'full endosperm'
AT1G70340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '46.1361'
Avg. embryo expression (LCM): '36.7338'
AT1G70330 ENT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '503.213'
Avg. embryo expression (LCM): '288.207'
AT1G70330 ENT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70330 ENT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70330 ENT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '433.916'
Avg. expression score in LCM sample: '341.829'
Tissue used: 'pure endosperm, no chalazal'
AT1G70330 ENT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '476.119'
Avg. expression score in LCM sample: '341.829'
Tissue used: 'full endosperm'
AT1G70330 ENT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70320 UPL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 4359 652 86.99% 5011 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70320 UPL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.0 x 10-30 1657 447 660 2064 78.75% 75.77% 2104 2724 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.3e-23'
Avg. expression score for this sample: '1084.66'
Avg. expression score in LCM sample: '565.708'
Tissue used: 'full endosperm'
AT1G70320 UPL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.0982 x 10-2 3029 961 75.91% 3990 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70320 UPL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.6944 x 10-2 820 614 273 216 57.18% 44.17% 1434 489 TAIR8 Avg. embryo expression (dissected): '902.495'
Avg. embryo expression (LCM): '568.816'
AT1G70320 UPL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.42931 x 10-1 875 316 453 809 73.47% 64.10% 1191 1262 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.3e-23'
Avg. expression score for this sample: '1192.19'
Avg. expression score in LCM sample: '565.708'
Tissue used: 'pure endosperm, no chalazal'
AT1G70320 UPL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.14907 x 10-1 384 156 71.11% 540 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70310 SPDS2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70310 SPDS2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '34.8351'
Avg. expression score in LCM sample: '51.3104'
Tissue used: 'pure endosperm, no chalazal'
AT1G70310 SPDS2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '93.4557'
Avg. expression score in LCM sample: '51.3104'
Tissue used: 'full endosperm'
AT1G70310 SPDS2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70310 SPDS2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '77.5665'
Avg. embryo expression (LCM): '138.345'
AT1G70310 SPDS2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70300 KUP6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.3844 x 10-2 992 399 71.32% 1391 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70300 KUP6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.48231 x 10-1 181 254 54 99 41.61% 64.71% 435 153 TAIR8 Avg. embryo expression (dissected): '127.333'
Avg. embryo expression (LCM): '34.7747'
AT1G70300 KUP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.77562 x 10-1 388 409 360 1208 48.68% 77.04% 797 1568 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.098655'
Avg. expression score for this sample: '262.569'
Avg. expression score in LCM sample: '138.072'
Tissue used: 'pure endosperm, no chalazal'
AT1G70300 KUP6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.3921 x 10-2 201 65 75.56% 266 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70300 KUP6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.52527 x 10-1 454 188 70.72% 642 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70300 KUP6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.8192 x 10-2 488 267 259 718 64.64% 73.49% 755 977 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.098655'
Avg. expression score for this sample: '170.147'
Avg. expression score in LCM sample: '138.072'
Tissue used: 'full endosperm'
AT1G70290 TPS8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 27 2 10 381 93.10% 97.44% 29 391 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.6e-37'
Avg. expression score for this sample: '106.563'
Avg. expression score in LCM sample: '4.87971'
Tissue used: 'full endosperm'
AT1G70290 TPS8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.29759 x 10-1 311 17 94.82% 328 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G70290 TPS8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.71159 x 10-1 28 29 7 11 49.12% 61.11% 57 18 TAIR8 Avg. embryo expression (dissected): '64.697'
Avg. embryo expression (LCM): '6.6686'
AT1G70290 TPS8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3 x 10-6 99 18 84.62% 117 TAIR8 Mutant effect: 'N/A (not a MEG)'