| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G70760 | NdhL | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 0 | 1 | 0 | 100.00% | 0.00% | 3 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.310777' Avg. expression score for this sample: '21.869' Avg. expression score in LCM sample: '9.28908' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G70760 | NdhL | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | TAIR8 |
Avg. embryo expression (dissected): '40.2704' Avg. embryo expression (LCM): '25.406' |
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| AT1G70750 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '31.0905' Avg. embryo expression (LCM): '12.7595' |
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| AT1G70750 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.4' Avg. expression score for this sample: '32.5342' Avg. expression score in LCM sample: '8.466' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G70750 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.4 | 0 | 0 | 3 | 0 | 0.00% | 0 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.4' Avg. expression score for this sample: '213.877' Avg. expression score in LCM sample: '8.466' Tissue used: 'full endosperm' |
||||||
| AT1G70750 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.1 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70750 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G70750 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.1 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70740 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70740 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G70740 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.44444 x 10-1 | 2 | 0 | 0 | 3 | 100.00% | 100.00% | 2 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.444444' Avg. expression score for this sample: '53.8573' Avg. expression score in LCM sample: '7.56943' Tissue used: 'full endosperm' |
|||||
| AT1G70740 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.444444' Avg. expression score for this sample: '30.2088' Avg. expression score in LCM sample: '7.56943' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G70740 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '34.5239' Avg. embryo expression (LCM): '20.1314' |
|||||
| AT1G70740 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G70730 | PGM2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.59 x 10-4 | 225 | 23 | 90.73% | 248 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G70730 | PGM2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.54882 x 10-1 | 13 | 5 | 72.22% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G70730 | PGM2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.01036 x 10-1 | 229 | 75 | 75.33% | 304 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G70730 | PGM2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.60917 x 10-1 | 19 | 8 | 4 | 7 | 70.37% | 63.64% | 27 | 11 | TAIR8 |
Avg. embryo expression (dissected): '161.32' Avg. embryo expression (LCM): '125.711' |
|||
| AT1G70730 | PGM2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 12 | 4 | 8 | 9 | 75.00% | 52.94% | 16 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.005092' Avg. expression score for this sample: '115.191' Avg. expression score in LCM sample: '92.8026' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G70730 | PGM2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.305 x 10-3 | 60 | 15 | 19 | 88 | 80.00% | 82.24% | 75 | 107 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.005092' Avg. expression score for this sample: '245.354' Avg. expression score in LCM sample: '92.8026' Tissue used: 'full endosperm' |
||||
| AT1G70720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.12113 x 10-1 | 14 | 13 | 0 | 1 | 51.85% | 100.00% | 27 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.637136' Avg. expression score for this sample: '9.73909' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G70720 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 3 | 0 | 4 | 50.00% | 100.00% | 6 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.637136' Avg. expression score for this sample: '3.89637' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G70720 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.90793 x 10-1 | 2 | 12 | 2 | 3 | 14.29% | 60.00% | 14 | 5 | TAIR8 |
Avg. embryo expression (dissected): '17.8998' Avg. embryo expression (LCM): '4.73458' |
||||
| AT1G70720 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G70720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70720 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G70710 | GH9B1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G70710 | GH9B1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G70710 | GH9B1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.77713 x 10-1 | 4 | 5 | 4 | 1 | 44.44% | 20.00% | 9 | 5 | TAIR8 |
Avg. embryo expression (dissected): '279.863' Avg. embryo expression (LCM): '306.768' |
|||
| AT1G70710 | GH9B1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 1 | 0 | 1 | 0.00% | 100.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '22.3394' Avg. expression score in LCM sample: '7.58412' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G70710 | GH9B1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 1 | 0 | 2 | 0.00% | 100.00% | 1 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '17.6953' Avg. expression score in LCM sample: '7.58412' Tissue used: 'full endosperm' |
||||
| AT1G70710 | GH9B1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.96429 x 10-1 | 0 | 3 | 0.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G70700 | TIFY7 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G70700 | TIFY7 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70700 | TIFY7 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70700 | TIFY7 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.02941 x 10-1 | 0 | 0 | 0 | 9 | 100.00% | 0 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.102941' Avg. expression score for this sample: '61.8229' Avg. expression score in LCM sample: '1.19053' Tissue used: 'full endosperm' |
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| AT1G70700 | TIFY7 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.102941' Avg. expression score for this sample: '8.9749' Avg. expression score in LCM sample: '1.19053' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G70700 | TIFY7 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.234319' Avg. embryo expression (LCM): '0' |
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| AT1G70690 | HWI1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.597941' Avg. embryo expression (LCM): '0' |
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| AT1G70690 | HWI1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '4.57373' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G70690 | HWI1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '32.7693' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT1G70690 | HWI1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70690 | HWI1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70690 | HWI1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70680 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G70680 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.33333 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70680 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 4 | 0 | 2 | 0 | 100.00% | 0.00% | 4 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '84.0197' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G70680 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '4.6299' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G70680 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '1.41912' |
||||||
| AT1G70680 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.66667 x 10-1 | 7 | 0 | 100.00% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70670 | CLO4 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.5979 x 10-2 | 21 | 0 | 100.00% | 21 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G70670 | CLO4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G70670 | CLO4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G70670 | CLO4 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '2.28445' Avg. embryo expression (LCM): '2.43636' |
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| AT1G70670 | CLO4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.44444 x 10-1 | 3 | 0 | 0 | 2 | 100.00% | 100.00% | 3 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.033774' Avg. expression score for this sample: '17.2779' Avg. expression score in LCM sample: '12.8019' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G70670 | CLO4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.5285 x 10-2 | 10 | 1 | 6 | 28 | 90.91% | 82.35% | 11 | 34 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.033774' Avg. expression score for this sample: '78.6832' Avg. expression score in LCM sample: '12.8019' Tissue used: 'full endosperm' |
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| AT1G70660 | MMZ2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.4 x 10-17 | 139 | 32 | 40 | 360 | 81.29% | 90.00% | 171 | 400 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.6e-13' Avg. expression score for this sample: '409.781' Avg. expression score in LCM sample: '19.3572' Tissue used: 'full endosperm' |
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| AT1G70660 | MMZ2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.25483 x 10-1 | 9 | 14 | 8 | 12 | 39.13% | 60.00% | 23 | 20 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.6e-13' Avg. expression score for this sample: '86.0549' Avg. expression score in LCM sample: '19.3572' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G70660 | MMZ2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.9764 x 10-2 | 4 | 24 | 1 | 5 | 14.29% | 83.33% | 28 | 6 | TAIR8 |
Avg. embryo expression (dissected): '91.4883' Avg. embryo expression (LCM): '96.2615' |
|||
| AT1G70660 | MMZ2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.5 x 10-7 | 206 | 6 | 97.17% | 212 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G70660 | MMZ2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.1 x 10-7 | 195 | 6 | 97.01% | 201 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G70660 | MMZ2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.6 x 10-5 | 67 | 0 | 100.00% | 67 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G70650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.9557 x 10-1 | 6 | 0 | 100.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.683 x 10-2 | 51 | 9 | 85.00% | 60 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70650 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.77311 x 10-1 | 52 | 58 | 21 | 7 | 47.27% | 25.00% | 110 | 28 | TAIR8 |
Avg. embryo expression (dissected): '46.9441' Avg. embryo expression (LCM): '78.3404' |
||||
| AT1G70650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.48369 x 10-1 | 15 | 13 | 9 | 23 | 53.57% | 71.88% | 28 | 32 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.199983' Avg. expression score for this sample: '18.7701' Avg. expression score in LCM sample: '6.61406' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G70650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.6726 x 10-2 | 99 | 31 | 14 | 39 | 76.15% | 73.58% | 130 | 53 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.199983' Avg. expression score for this sample: '32.91' Avg. expression score in LCM sample: '6.61406' Tissue used: 'full endosperm' |
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| AT1G70650 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.9 x 10-12 | 99 | 0 | 100.00% | 99 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70645 | MIR777A | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70645 | MIR777A | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G70645 | MIR777A | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70645 | MIR777A | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70645 | MIR777A | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G70645 | MIR777A | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT1G70640 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Avg. embryo expression (dissected): '.975673' Avg. embryo expression (LCM): '0' |
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| AT1G70640 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.73343 x 10-1 | 2 | 1 | 2 | 15 | 66.67% | 88.24% | 3 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.165322' Avg. expression score for this sample: '5.31125' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G70640 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.165322' Avg. expression score for this sample: '1.34424' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G70640 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.55099 x 10-1 | 48 | 17 | 73.85% | 65 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.58266 x 10-1 | 38 | 3 | 92.68% | 41 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.40642 x 10-1 | 6 | 1 | 85.71% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 8 | 4 | 66.67% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.08259 x 10-1 | 43 | 31 | 22 | 55 | 58.11% | 71.43% | 74 | 77 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.730015' Avg. expression score for this sample: '27.2914' Avg. expression score in LCM sample: '21.018' Tissue used: 'full endosperm' |
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| AT1G70630 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 26 | 23 | 6 | 5 | 53.06% | 45.45% | 49 | 11 | TAIR8 |
Avg. embryo expression (dissected): '19.5707' Avg. embryo expression (LCM): '23.585' |
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| AT1G70630 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.89 x 10-4 | 30 | 1 | 96.77% | 31 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.89918 x 10-1 | 56 | 19 | 25 | 55 | 74.67% | 68.75% | 75 | 80 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.730015' Avg. expression score for this sample: '34.4561' Avg. expression score in LCM sample: '21.018' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G70620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.31632 x 10-1 | 152 | 65 | 73 | 159 | 70.05% | 68.53% | 217 | 232 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.003105' Avg. expression score for this sample: '303.972' Avg. expression score in LCM sample: '78.2811' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G70620 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.7 x 10-7 | 361 | 71 | 83.56% | 432 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.01047 x 10-1 | 63 | 17 | 78.75% | 80 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.111 x 10-3 | 385 | 150 | 92 | 281 | 71.96% | 75.34% | 535 | 373 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.003105' Avg. expression score for this sample: '489.539' Avg. expression score in LCM sample: '78.2811' Tissue used: 'full endosperm' |
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| AT1G70620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 241 | 93 | 72.16% | 334 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70620 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.06244 x 10-1 | 129 | 118 | 52 | 53 | 52.23% | 50.48% | 247 | 105 | TAIR8 |
Avg. embryo expression (dissected): '340.006' Avg. embryo expression (LCM): '194.181' |
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| AT1G70610 | ABCB26 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '44.6592' Avg. embryo expression (LCM): '43.2266' |
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| AT1G70610 | ABCB26 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.00679 x 10-1 | 9 | 1 | 90.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G70610 | ABCB26 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 2 | 0 | 100.00% | 0.00% | 1 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.592075' Avg. expression score for this sample: '21.6294' Avg. expression score in LCM sample: '18.5047' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G70610 | ABCB26 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G70610 | ABCB26 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G70610 | ABCB26 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 1 | 1 | 2 | 0.00% | 66.67% | 1 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.592075' Avg. expression score for this sample: '35.3377' Avg. expression score in LCM sample: '18.5047' Tissue used: 'full endosperm' |
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| AT1G70600 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.9 x 10-17 | 8 | 902 | 11 | 1036 | 0.88% | 98.95% | 910 | 1047 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '2100.47' Avg. expression score in LCM sample: '710.938' Tissue used: 'full endosperm' |
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| AT1G70600 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 2002 | 21 | 98.96% | 2023 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |