| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G71210 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.5373 x 10-1 | 125 | 54 | 69.83% | 179 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71210 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.6642 x 10-2 | 99 | 32 | 36 | 102 | 75.57% | 73.91% | 131 | 138 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.096863' Avg. expression score for this sample: '119.794' Avg. expression score in LCM sample: '29.3811' Tissue used: 'full endosperm' |
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| AT1G71200 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.23589' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G71200 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71200 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '1.63261' |
||||||
| AT1G71200 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G71200 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.334308' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G71200 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G71190 | SAG18 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.64057 x 10-1 | 20 | 4 | 83.33% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G71190 | SAG18 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.2878 x 10-2 | 151 | 28 | 84.36% | 179 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G71190 | SAG18 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.2325 x 10-2 | 76 | 25 | 33 | 102 | 75.25% | 75.56% | 101 | 135 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.029063' Avg. expression score for this sample: '109.808' Avg. expression score in LCM sample: '39.4639' Tissue used: 'full endosperm' |
||||
| AT1G71190 | SAG18 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.94077 x 10-1 | 30 | 12 | 10 | 29 | 71.43% | 74.36% | 42 | 39 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.029063' Avg. expression score for this sample: '67.9501' Avg. expression score in LCM sample: '39.4639' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G71190 | SAG18 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.4 x 10-8 | 210 | 17 | 92.51% | 227 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G71190 | SAG18 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.13605 x 10-1 | 17 | 11 | 5 | 2 | 60.71% | 28.57% | 28 | 7 | TAIR8 |
Avg. embryo expression (dissected): '41.3086' Avg. embryo expression (LCM): '19.7672' |
|||
| AT1G71180 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.41894 x 10-1 | 67 | 88 | 15 | 31 | 43.23% | 67.39% | 155 | 46 | TAIR8 |
Avg. embryo expression (dissected): '593.101' Avg. embryo expression (LCM): '289.739' |
||||
| AT1G71180 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.5 x 10-13 | 219 | 7 | 96.90% | 226 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71180 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.37054 x 10-1 | 47 | 33 | 17 | 66 | 58.75% | 79.52% | 80 | 83 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000574' Avg. expression score for this sample: '318.21' Avg. expression score in LCM sample: '88.7901' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G71180 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.63516 x 10-1 | 35 | 5 | 87.50% | 40 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71180 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.7 x 10-5 | 113 | 28 | 23 | 117 | 80.14% | 83.57% | 141 | 140 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000574' Avg. expression score for this sample: '322.904' Avg. expression score in LCM sample: '88.7901' Tissue used: 'full endosperm' |
|||||
| AT1G71180 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.505 x 10-3 | 170 | 23 | 88.08% | 193 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71170 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.9 x 10-5 | 1672 | 521 | 76.24% | 2193 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71170 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.1 x 10-26 | 1961 | 569 | 571 | 1744 | 77.51% | 75.33% | 2530 | 2315 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '5.3e-19' Avg. expression score for this sample: '811.797' Avg. expression score in LCM sample: '616.695' Tissue used: 'full endosperm' |
|||||
| AT1G71170 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 9.915 x 10-3 | 2088 | 867 | 1058 | 2168 | 70.66% | 67.20% | 2955 | 3226 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '5.3e-19' Avg. expression score for this sample: '1276.44' Avg. expression score in LCM sample: '616.695' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G71170 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 1786 | 206 | 89.66% | 1992 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71170 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.77879 x 10-1 | 1185 | 1000 | 386 | 285 | 54.23% | 42.47% | 2185 | 671 | TAIR8 |
Avg. embryo expression (dissected): '886.772' Avg. embryo expression (LCM): '345.147' |
||||
| AT1G71170 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.4 x 10-5 | 625 | 164 | 79.21% | 789 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71160 | KCS7 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71160 | KCS7 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 1 | 1 | 100.00% | 50.00% | 1 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '100.945' Avg. expression score in LCM sample: '231.154' Tissue used: 'full endosperm' |
||||
| AT1G71160 | KCS7 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71160 | KCS7 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '17.3436' Avg. embryo expression (LCM): '1.67029' |
||||
| AT1G71160 | KCS7 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71160 | KCS7 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 0 | 2 | 0 | 100.00% | 0.00% | 2 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '185.502' Avg. expression score in LCM sample: '231.154' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G71150 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '7.01746' Avg. expression score in LCM sample: '9.37727' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G71150 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 8 | 1 | 88.89% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71150 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.65033' Avg. embryo expression (LCM): '0' |
||||||
| AT1G71150 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G71150 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 14 | 6 | 70.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71150 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '13.1027' Avg. expression score in LCM sample: '9.37727' Tissue used: 'full endosperm' |
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| AT1G71140 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 5 | 1 | 0 | 0 | 83.33% | 6 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.27774' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G71140 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71140 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '.816307' |
||||||
| AT1G71140 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 25 | 9 | 73.53% | 34 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71140 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.166937' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G71140 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G71130 | CRF8 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G71130 | CRF8 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71130 | CRF8 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 1 | 1 | 1 | 66.67% | 50.00% | 3 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '269.198' Avg. expression score in LCM sample: '77.2522' Tissue used: 'full endosperm' |
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| AT1G71130 | CRF8 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 4 | 0 | 1 | 2 | 100.00% | 66.67% | 4 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '344.264' Avg. expression score in LCM sample: '77.2522' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G71130 | CRF8 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G71130 | CRF8 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | TAIR8 |
Avg. embryo expression (dissected): '132.772' Avg. embryo expression (LCM): '93.0842' |
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| AT1G71120 | GLIP6 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '196.316' Avg. embryo expression (LCM): '19.6793' |
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| AT1G71120 | GLIP6 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71120 | GLIP6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1915.57' Avg. expression score in LCM sample: '1622.87' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G71120 | GLIP6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71120 | GLIP6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '2115.66' Avg. expression score in LCM sample: '1622.87' Tissue used: 'full endosperm' |
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| AT1G71120 | GLIP6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.66731 x 10-1 | 69 | 15 | 82.14% | 84 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.31989 x 10-1 | 12 | 1 | 1 | 5 | 92.31% | 83.33% | 13 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.125557' Avg. expression score for this sample: '44.2258' Avg. expression score in LCM sample: '119.641' Tissue used: 'full endosperm' |
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| AT1G71110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.50396 x 10-1 | 21 | 10 | 7 | 29 | 67.74% | 80.56% | 31 | 36 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.125557' Avg. expression score for this sample: '86.3003' Avg. expression score in LCM sample: '119.641' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G71110 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.79089 x 10-1 | 18 | 4 | 81.82% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71110 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.37186 x 10-1 | 0 | 3 | 3 | 3 | 0.00% | 50.00% | 3 | 6 | TAIR8 |
Avg. embryo expression (dissected): '16.8494' Avg. embryo expression (LCM): '13.9651' |
||||
| AT1G71110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71100 | RSW10 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 9.4394 x 10-2 | 29 | 4 | 87.88% | 33 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G71100 | RSW10 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.1765 x 10-2 | 85 | 33 | 58 | 192 | 72.03% | 76.80% | 118 | 250 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.034789' Avg. expression score for this sample: '210.456' Avg. expression score in LCM sample: '288.579' Tissue used: 'full endosperm' |
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| AT1G71100 | RSW10 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.3566 x 10-2 | 165 | 84 | 66.27% | 249 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G71100 | RSW10 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 9.14144 x 10-1 | 80 | 80 | 8 | 4 | 50.00% | 33.33% | 160 | 12 | TAIR8 |
Avg. embryo expression (dissected): '758.463' Avg. embryo expression (LCM): '693.799' |
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| AT1G71100 | RSW10 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.1 x 10-8 | 238 | 26 | 90.15% | 264 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G71100 | RSW10 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.39669 x 10-1 | 24 | 13 | 7 | 9 | 64.86% | 56.25% | 37 | 16 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.034789' Avg. expression score for this sample: '227.043' Avg. expression score in LCM sample: '288.579' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G71090 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 1 | 2 | 0 | 66.67% | 0.00% | 3 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.626793' Avg. expression score for this sample: '166.26' Avg. expression score in LCM sample: '62.0693' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G71090 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.6772 x 10-2 | 8 | 0 | 100.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71090 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 3 | 2 | 2 | 0 | 60.00% | 0.00% | 5 | 2 | TAIR8 |
Avg. embryo expression (dissected): '179.683' Avg. embryo expression (LCM): '73.3295' |
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| AT1G71090 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.80455 x 10-1 | 5 | 1 | 83.33% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71090 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.82346 x 10-1 | 9 | 2 | 81.82% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71090 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.91071 x 10-1 | 7 | 4 | 8 | 12 | 63.64% | 60.00% | 11 | 20 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.626793' Avg. expression score for this sample: '199.184' Avg. expression score in LCM sample: '62.0693' Tissue used: 'full endosperm' |
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| AT1G71080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '558.454' Avg. expression score in LCM sample: '124.712' Tissue used: 'full endosperm' |
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| AT1G71080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G71080 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '793.465' Avg. embryo expression (LCM): '309.205' |
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| AT1G71080 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G71080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '846.197' Avg. expression score in LCM sample: '124.712' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G71080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G71070 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.34128 x 10-1 | 8 | 0 | 100.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71070 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.2172 x 10-2 | 20 | 0 | 100.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71070 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.69197 x 10-1 | 9 | 4 | 6 | 23 | 69.23% | 79.31% | 13 | 29 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.149043' Avg. expression score for this sample: '62.1728' Avg. expression score in LCM sample: '11.5085' Tissue used: 'full endosperm' |
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| AT1G71070 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.31989 x 10-1 | 5 | 1 | 1 | 12 | 83.33% | 92.31% | 6 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.149043' Avg. expression score for this sample: '33.2631' Avg. expression score in LCM sample: '11.5085' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G71070 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.263 x 10-3 | 55 | 1 | 98.21% | 56 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71070 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 5 | 9 | 0 | 2 | 35.71% | 100.00% | 14 | 2 | TAIR8 |
Avg. embryo expression (dissected): '37.2045' Avg. embryo expression (LCM): '44.9471' |
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| AT1G71060 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '54.5197' Avg. embryo expression (LCM): '86.8928' |
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| AT1G71060 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G71060 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '18.1937' Avg. expression score in LCM sample: '3.83616' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G71060 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G71060 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '35.3257' Avg. expression score in LCM sample: '3.83616' Tissue used: 'full endosperm' |
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| AT1G71060 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G71050 | HIPP20 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71050 | HIPP20 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.26039' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G71050 | HIPP20 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G71050 | HIPP20 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71050 | HIPP20 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.597371' Avg. embryo expression (LCM): '0' |
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| AT1G71050 | HIPP20 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71040 | LPR2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.88668 x 10-1 | 31 | 16 | 65.96% | 47 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G71040 | LPR2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.0524 x 10-2 | 59 | 47 | 23 | 145 | 55.66% | 86.31% | 106 | 168 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.080066' Avg. expression score for this sample: '56.4384' Avg. expression score in LCM sample: '29.7486' Tissue used: 'full endosperm' |