Displaying data sets 131101 - 131200 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G71360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.71557 x 10-1 230 224 123 135 50.66% 52.33% 454 258 TAIR8 Avg. embryo expression (dissected): '581.117'
Avg. embryo expression (LCM): '90.158'
AT1G71360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.53226 x 10-1 2590 1079 70.59% 3669 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.02337 x 10-1 255 80 76.12% 335 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 3431 652 84.03% 4083 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.4 x 10-11 987 377 398 1284 72.36% 76.34% 1364 1682 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.0e-09'
Avg. expression score for this sample: '1026.17'
Avg. expression score in LCM sample: '239.811'
Tissue used: 'full endosperm'
AT1G71360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.21938 x 10-1 726 269 428 785 72.96% 64.72% 995 1213 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.0e-09'
Avg. expression score for this sample: '990.424'
Avg. expression score in LCM sample: '239.811'
Tissue used: 'pure endosperm, no chalazal'
AT1G71350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.44962 x 10-1 44 47 21 139 48.35% 86.88% 91 160 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.016519'
Avg. expression score for this sample: '72.7847'
Avg. expression score in LCM sample: '63.3333'
Tissue used: 'pure endosperm, no chalazal'
AT1G71350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.7163 x 10-2 78 88 43 267 46.99% 86.13% 166 310 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.016519'
Avg. expression score for this sample: '73.4618'
Avg. expression score in LCM sample: '63.3333'
Tissue used: 'full endosperm'
AT1G71350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.8 x 10-8 833 165 83.47% 998 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.40978 x 10-1 34 59 14 27 36.56% 65.85% 93 41 TAIR8 Avg. embryo expression (dissected): '77.8168'
Avg. embryo expression (LCM): '64.5511'
AT1G71350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.5 x 10-5 279 174 61.59% 453 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.6 x 10-6 87 6 93.55% 93 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71340 GDPD4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.029 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71340 GDPD4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.54866 x 10-1 20 1 95.24% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71340 GDPD4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.29888 x 10-1 24 1 4 0 96.00% 0.00% 25 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.020584'
Avg. expression score for this sample: '77.9814'
Avg. expression score in LCM sample: '19.122'
Tissue used: 'full endosperm'
AT1G71340 GDPD4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.1073 x 10-2 8 0 0 7 100.00% 100.00% 8 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.020584'
Avg. expression score for this sample: '31.9086'
Avg. expression score in LCM sample: '19.122'
Tissue used: 'pure endosperm, no chalazal'
AT1G71340 GDPD4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.67472 x 10-1 13 3 21 2 81.25% 8.70% 16 23 TAIR8 Avg. embryo expression (dissected): '96.0189'
Avg. embryo expression (LCM): '57.468'
AT1G71340 GDPD4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.5598 x 10-1 19 1 95.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71330 NAP5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.50116 x 10-1 25 10 71.43% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71330 NAP5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.62554 x 10-1 12 7 2 1 63.16% 33.33% 19 3 TAIR8 Avg. embryo expression (dissected): '23.918'
Avg. embryo expression (LCM): '9.04218'
AT1G71330 NAP5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.06 x 10-4 46 1 97.87% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71330 NAP5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71330 NAP5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 8 0 6 42.86% 100.00% 14 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.221805'
Avg. expression score for this sample: '10.0876'
Avg. expression score in LCM sample: '3.02777'
Tissue used: 'pure endosperm, no chalazal'
AT1G71330 NAP5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.35806 x 10-1 37 4 7 9 90.24% 56.25% 41 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.221805'
Avg. expression score for this sample: '31.5492'
Avg. expression score in LCM sample: '3.02777'
Tissue used: 'full endosperm'
AT1G71320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.426348'
Avg. expression score in LCM sample: '13.7426'
Tissue used: 'full endosperm'
AT1G71320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 3 100.00% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.20474'
Avg. expression score in LCM sample: '13.7426'
Tissue used: 'pure endosperm, no chalazal'
AT1G71320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G71320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 167 6 96.53% 173 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7225 x 10-2 5 13 27.78% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71310 RAD52-1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71310 RAD52-1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71310 RAD52-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '126.211'
Avg. expression score in LCM sample: '130.415'
Tissue used: 'pure endosperm, no chalazal'
AT1G71310 RAD52-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '167.252'
Avg. expression score in LCM sample: '130.415'
Tissue used: 'full endosperm'
AT1G71310 RAD52-1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71310 RAD52-1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '222.498'
Avg. embryo expression (LCM): '550.103'
AT1G71300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.46879'
Avg. embryo expression (LCM): '0'
AT1G71300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.33204'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G71300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.02443'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G71290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.856143'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G71290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.8123'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G71290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.3333 x 10-2 0 11 0.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G71290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 13 0 100.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.44444 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 2 100.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.03073'
Avg. expression score in LCM sample: '1.94012'
Tissue used: 'full endosperm'
AT1G71280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.56002'
Avg. expression score in LCM sample: '1.94012'
Tissue used: 'pure endosperm, no chalazal'
AT1G71280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '.828866'
AT1G71280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.7619 x 10-2 1 5 16.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71270 POK endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.9415 x 10-1 287 134 68.17% 421 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71270 POK embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.93208 x 10-1 71 43 17 12 62.28% 41.38% 114 29 TAIR8 Avg. embryo expression (dissected): '57.3306'
Avg. embryo expression (LCM): '36.3822'
AT1G71270 POK endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.5 x 10-19 422 50 89.41% 472 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71270 POK endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.33951 x 10-1 30 12 71.43% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71270 POK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.81186 x 10-1 96 19 49 65 83.48% 57.02% 115 114 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.72734'
Avg. expression score for this sample: '56.1031'
Avg. expression score in LCM sample: '35.9805'
Tissue used: 'pure endosperm, no chalazal'
AT1G71270 POK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.43193 x 10-1 145 32 117 148 81.92% 55.85% 177 265 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.72734'
Avg. expression score for this sample: '94.7812'
Avg. expression score in LCM sample: '35.9805'
Tissue used: 'full endosperm'
AT1G71260 ATWHY2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.32825 x 10-1 59 21 28 53 73.75% 65.43% 80 81 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.848265'
Avg. expression score for this sample: '70.7896'
Avg. expression score in LCM sample: '20.5036'
Tissue used: 'full endosperm'
AT1G71260 ATWHY2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.68901 x 10-1 30 17 18 18 63.83% 50.00% 47 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.848265'
Avg. expression score for this sample: '50.3795'
Avg. expression score in LCM sample: '20.5036'
Tissue used: 'pure endosperm, no chalazal'
AT1G71260 ATWHY2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.0206 x 10-1 72 58 4 6 55.38% 60.00% 130 10 TAIR8 Avg. embryo expression (dissected): '108.652'
Avg. embryo expression (LCM): '218.293'
AT1G71260 ATWHY2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.47925 x 10-1 52 37 58.43% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71260 ATWHY2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.58323 x 10-1 7 7 50.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71260 ATWHY2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-7 82 6 93.18% 88 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.70149 x 10-1 36 11 76.60% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.47754 x 10-1 106 56 65.43% 162 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.27164 x 10-1 419 313 299 849 57.24% 73.95% 732 1148 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.292891'
Avg. expression score for this sample: '6224.01'
Avg. expression score in LCM sample: '4159.6'
Tissue used: 'pure endosperm, no chalazal'
AT1G71250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.28585 x 10-1 358 250 302 830 58.88% 73.32% 608 1132 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.292891'
Avg. expression score for this sample: '2569.29'
Avg. expression score in LCM sample: '4159.6'
Tissue used: 'full endosperm'
AT1G71250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4302 x 10-2 6 10 37.50% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.15 x 10-4 30 9 3 25 76.92% 89.29% 39 28 TAIR8 Avg. embryo expression (dissected): '399.151'
Avg. embryo expression (LCM): '70.1522'
AT1G71240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.89731 x 10-1 33 44 6 21 42.86% 77.78% 77 27 TAIR8 Avg. embryo expression (dissected): '21.0115'
Avg. embryo expression (LCM): '22.618'
AT1G71240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0 x 10-10 215 18 92.27% 233 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.74401 x 10-1 51 21 70.83% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.3 x 10-9 284 33 89.59% 317 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.462 x 10-3 109 75 56 285 59.24% 83.58% 184 341 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00176'
Avg. expression score for this sample: '45.9297'
Avg. expression score in LCM sample: '15.9913'
Tissue used: 'full endosperm'
AT1G71240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.53504 x 10-1 41 30 31 116 57.75% 78.91% 71 147 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00176'
Avg. expression score for this sample: '26.3445'
Avg. expression score in LCM sample: '15.9913'
Tissue used: 'pure endosperm, no chalazal'
AT1G71235 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G71235 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G71235 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71235 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G71235 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71235 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71230 CSN5B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.9774 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71230 CSN5B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71230 CSN5B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 8 2 4 6 80.00% 60.00% 10 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.175976'
Avg. expression score for this sample: '10.5985'
Avg. expression score in LCM sample: '32.5118'
Tissue used: 'full endosperm'
AT1G71230 CSN5B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.781 x 10-2 17 1 3 9 94.44% 75.00% 18 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.175976'
Avg. expression score for this sample: '23.049'
Avg. expression score in LCM sample: '32.5118'
Tissue used: 'pure endosperm, no chalazal'
AT1G71230 CSN5B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.0909 x 10-2 5 0 0 1 100.00% 100.00% 5 1 TAIR8 Avg. embryo expression (dissected): '11.7541'
Avg. embryo expression (LCM): '2.87591'
AT1G71230 CSN5B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.34387 x 10-1 24 10 70.59% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71220 EBS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4096 x 10-1 119 27 81.51% 146 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71220 EBS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.19332 x 10-1 19 40 13 12 32.20% 48.00% 59 25 TAIR8 Avg. embryo expression (dissected): '73.4253'
Avg. embryo expression (LCM): '60.4444'
AT1G71220 EBS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.106 x 10-3 118 16 88.06% 134 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71220 EBS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.89621 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71220 EBS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.50066 x 10-1 39 12 10 26 76.47% 72.22% 51 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.05221'
Avg. expression score for this sample: '38.9667'
Avg. expression score in LCM sample: '45.3137'
Tissue used: 'pure endosperm, no chalazal'
AT1G71220 EBS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.2779 x 10-2 24 13 16 70 64.86% 81.40% 37 86 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.05221'
Avg. expression score for this sample: '69.0502'
Avg. expression score in LCM sample: '45.3137'
Tissue used: 'full endosperm'
AT1G71210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.6642 x 10-2 99 32 36 102 75.57% 73.91% 131 138 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.096863'
Avg. expression score for this sample: '119.794'
Avg. expression score in LCM sample: '29.3811'
Tissue used: 'full endosperm'
AT1G71210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 58 20 27 40 74.36% 59.70% 78 67 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.096863'
Avg. expression score for this sample: '106.274'
Avg. expression score in LCM sample: '29.3811'
Tissue used: 'pure endosperm, no chalazal'
AT1G71210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.26252 x 10-1 72 65 15 14 52.55% 48.28% 137 29 TAIR8 Avg. embryo expression (dissected): '201.401'
Avg. embryo expression (LCM): '201.264'
AT1G71210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.5373 x 10-1 125 54 69.83% 179 TAIR8 Mutant effect: 'N/A (not a MEG)'