Displaying data sets 130801 - 130900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G71940 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 2 3 2 66.67% 40.00% 6 5 TAIR8 Avg. embryo expression (dissected): '7.77587'
Avg. embryo expression (LCM): '13.9903'
AT1G71940 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.1 x 10-6 126 17 88.11% 143 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 22 6 9 11 78.57% 55.00% 28 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '14.9452'
Avg. expression score in LCM sample: '17.4611'
Tissue used: 'pure endosperm, no chalazal'
AT1G71940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 50 15 30 37 76.92% 55.22% 65 67 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '24.5679'
Avg. expression score in LCM sample: '17.4611'
Tissue used: 'full endosperm'
AT1G71940 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.54 x 10-4 51 5 91.07% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71940 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.89194 x 10-1 13 4 76.47% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71930 VND7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71930 VND7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.155303'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G71930 VND7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71930 VND7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.498406'
Avg. embryo expression (LCM): '1.08004'
AT1G71930 VND7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G71930 VND7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71920 HISN6B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71920 HISN6B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.9683 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71920 HISN6B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 3 0.00% 100.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.19935'
Avg. expression score for this sample: '12.9429'
Avg. expression score in LCM sample: '12.405'
Tissue used: 'pure endosperm, no chalazal'
AT1G71920 HISN6B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.85185 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71920 HISN6B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.80579 x 10-1 0 3 0 19 0.00% 100.00% 3 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.19935'
Avg. expression score for this sample: '23.7053'
Avg. expression score in LCM sample: '12.405'
Tissue used: 'full endosperm'
AT1G71920 HISN6B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 0 6 0 2 0.00% 100.00% 6 2 TAIR8 Avg. embryo expression (dissected): '36.0659'
Avg. embryo expression (LCM): '28.5456'
AT1G71910 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '4.45184'
Avg. embryo expression (LCM): '0'
AT1G71910 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.2462 x 10-2 200 0 100.00% 200 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.5e-13'
Avg. expression score for this sample: '17.7523'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G71910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.3 x 10-13 63 2 1 76 96.92% 98.70% 65 77 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.5e-13'
Avg. expression score for this sample: '86.8159'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G71910 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.28399 x 10-1 119 1 99.17% 120 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71910 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71900 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.73343 x 10-1 6 1 2 11 85.71% 84.62% 7 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.355036'
Avg. expression score for this sample: '44.2435'
Avg. expression score in LCM sample: '37.2886'
Tissue used: 'full endosperm'
AT1G71900 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.1877 x 10-2 26 0 100.00% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71900 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.14286 x 10-1 3 0 0 1 100.00% 100.00% 3 1 TAIR8 Avg. embryo expression (dissected): '39.9645'
Avg. embryo expression (LCM): '42.0084'
AT1G71900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 0 5 33.33% 100.00% 3 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.355036'
Avg. expression score for this sample: '30.0971'
Avg. expression score in LCM sample: '37.2886'
Tissue used: 'pure endosperm, no chalazal'
AT1G71900 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.35783 x 10-1 8 6 57.14% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71890 SUC5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2 x 10-11 768 565 57.61% 1333 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71890 SUC5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.77928 x 10-1 140 67 67.63% 207 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71890 SUC5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.36521 x 10-1 366 181 255 523 66.91% 67.22% 547 778 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.199778'
Avg. expression score for this sample: '368.727'
Avg. expression score in LCM sample: '211.371'
Tissue used: 'pure endosperm, no chalazal'
AT1G71890 SUC5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.0 x 10-7 376 100 78.99% 476 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71890 SUC5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.36565 x 10-1 695 251 371 683 73.47% 64.80% 946 1054 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.199778'
Avg. expression score for this sample: '435.005'
Avg. expression score in LCM sample: '211.371'
Tissue used: 'full endosperm'
AT1G71890 SUC5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 123 111 61 51 52.56% 45.54% 234 112 TAIR8 Avg. embryo expression (dissected): '165.7'
Avg. embryo expression (LCM): '29.2866'
AT1G71880 SUC1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 9 2 5 47.06% 71.43% 17 7 TAIR8 Avg. embryo expression (dissected): '61.2512'
Avg. embryo expression (LCM): '7.14583'
AT1G71880 SUC1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71880 SUC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.20736'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G71880 SUC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.17467'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G71880 SUC1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.4 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71880 SUC1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71870 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '56.5825'
Avg. expression score in LCM sample: '75.8412'
Tissue used: 'full endosperm'
AT1G71870 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71870 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '625.816'
Avg. embryo expression (LCM): '478.231'
AT1G71870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '152.402'
Avg. expression score in LCM sample: '75.8412'
Tissue used: 'pure endosperm, no chalazal'
AT1G71870 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71865 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71865 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71865 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '68.3931'
Avg. expression score in LCM sample: '23.7077'
Tissue used: 'pure endosperm, no chalazal'
AT1G71865 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71865 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '71.523'
Avg. expression score in LCM sample: '23.7077'
Tissue used: 'full endosperm'
AT1G71865 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '57.3808'
Avg. embryo expression (LCM): '48.6143'
AT1G71860 PTP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.5159 x 10-1 13 6 2 4 68.42% 66.67% 19 6 TAIR8 Avg. embryo expression (dissected): '32.7328'
Avg. embryo expression (LCM): '32.6272'
AT1G71860 PTP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.82167 x 10-1 362 70 83.80% 432 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71860 PTP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.443 x 10-2 33 6 5 15 84.62% 75.00% 39 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000119'
Avg. expression score for this sample: '46.4127'
Avg. expression score in LCM sample: '43.0796'
Tissue used: 'pure endosperm, no chalazal'
AT1G71860 PTP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.56 x 10-4 72 15 34 130 82.76% 79.27% 87 164 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000119'
Avg. expression score for this sample: '64.4308'
Avg. expression score in LCM sample: '43.0796'
Tissue used: 'full endosperm'
AT1G71860 PTP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.1 x 10-5 284 137 67.46% 421 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71860 PTP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.20439 x 10-1 12 6 66.67% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.44725 x 10-1 9 4 69.23% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.2988 x 10-2 41 7 20 54 85.42% 72.97% 48 74 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.071309'
Avg. expression score for this sample: '57.9463'
Avg. expression score in LCM sample: '27.0295'
Tissue used: 'full endosperm'
AT1G71850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-6 176 15 92.15% 191 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.3455 x 10-2 81 122 12 16 39.90% 57.14% 203 28 TAIR8 Avg. embryo expression (dissected): '153.859'
Avg. embryo expression (LCM): '249.476'
AT1G71850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.83943 x 10-1 56 23 11 29 70.89% 72.50% 79 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.071309'
Avg. expression score for this sample: '55.231'
Avg. expression score in LCM sample: '27.0295'
Tissue used: 'pure endosperm, no chalazal'
AT1G71850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.79 x 10-4 104 73 58.76% 177 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '73.4606'
Avg. expression score in LCM sample: '56.3224'
Tissue used: 'pure endosperm, no chalazal'
AT1G71840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '105.063'
Avg. expression score in LCM sample: '56.3224'
Tissue used: 'full endosperm'
AT1G71840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '161.285'
Avg. embryo expression (LCM): '238.236'
AT1G71830 SERK1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 8 10 0 0 44.44% 18 0 TAIR8 Avg. embryo expression (dissected): '284.917'
Avg. embryo expression (LCM): '174.715'
AT1G71830 SERK1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.2 x 10-5 22 0 100.00% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71830 SERK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 3 3 3 70.00% 50.00% 10 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.240531'
Avg. expression score for this sample: '352.737'
Avg. expression score in LCM sample: '174.038'
Tissue used: 'pure endosperm, no chalazal'
AT1G71830 SERK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.2577 x 10-1 89 35 62 64 71.77% 50.79% 124 126 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.240531'
Avg. expression score for this sample: '337.944'
Avg. expression score in LCM sample: '174.038'
Tissue used: 'full endosperm'
AT1G71830 SERK1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.01145 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71830 SERK1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71820 SEC6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.40893 x 10-1 10 1 90.91% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71820 SEC6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 8 4 5 14 66.67% 73.68% 12 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '147.689'
Avg. expression score in LCM sample: '132.781'
Tissue used: 'full endosperm'
AT1G71820 SEC6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 18 7 72.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71820 SEC6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 1 1 0 66.67% 0.00% 3 1 TAIR8 Avg. embryo expression (dissected): '99.6223'
Avg. embryo expression (LCM): '86.5035'
AT1G71820 SEC6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '132.647'
Avg. expression score in LCM sample: '132.781'
Tissue used: 'pure endosperm, no chalazal'
AT1G71820 SEC6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.32156 x 10-1 27 4 87.10% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '22.3987'
Avg. expression score in LCM sample: '34.0698'
Tissue used: 'pure endosperm, no chalazal'
AT1G71810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '27.2563'
Avg. expression score in LCM sample: '34.0698'
Tissue used: 'full endosperm'
AT1G71810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '26.5043'
Avg. embryo expression (LCM): '19.403'
AT1G71800 CSTF64 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 1 1 0 50.00% 0.00% 2 1 TAIR8 Avg. embryo expression (dissected): '55.9136'
Avg. embryo expression (LCM): '58.9248'
AT1G71800 CSTF64 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.64569 x 10-1 17 4 80.95% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71800 CSTF64 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 3 100.00% 75.00% 1 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '45.3224'
Avg. expression score in LCM sample: '22.9875'
Tissue used: 'pure endosperm, no chalazal'
AT1G71800 CSTF64 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 2 3 6 50.00% 66.67% 4 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '42.8865'
Avg. expression score in LCM sample: '22.9875'
Tissue used: 'full endosperm'
AT1G71800 CSTF64 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.58168 x 10-1 6 6 50.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71800 CSTF64 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71790 CPB endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.08762 x 10-1 27 3 90.00% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71790 CPB endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.3045 x 10-2 49 13 22 72 79.03% 76.60% 62 94 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009953'
Avg. expression score for this sample: '103.36'
Avg. expression score in LCM sample: '62.2604'
Tissue used: 'full endosperm'
AT1G71790 CPB endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0239 x 10-2 140 23 85.89% 163 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G71790 CPB embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.19983 x 10-1 120 103 17 9 53.81% 34.62% 223 26 TAIR8 Avg. embryo expression (dissected): '409.901'
Avg. embryo expression (LCM): '247.454'