| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G72110 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G72110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.0996' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT1G72110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G72110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.26028 x 10-1 | 113 | 67 | 62.78% | 180 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.7442 x 10-2 | 111 | 38 | 74.50% | 149 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72100 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.45584 x 10-1 | 138 | 194 | 158 | 184 | 41.57% | 53.80% | 332 | 342 | TAIR8 |
Avg. embryo expression (dissected): '567.453' Avg. embryo expression (LCM): '1.53215' |
||||
| AT1G72100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.67879 x 10-1 | 316 | 220 | 121 | 326 | 58.96% | 72.93% | 536 | 447 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.897931' Avg. expression score for this sample: '247.654' Avg. expression score in LCM sample: '11.6114' Tissue used: 'full endosperm' |
|||||
| AT1G72100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.6128 x 10-1 | 343 | 149 | 243 | 466 | 69.72% | 65.73% | 492 | 709 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.897931' Avg. expression score for this sample: '446.467' Avg. expression score in LCM sample: '11.6114' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G72100 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.3 x 10-5 | 30 | 40 | 42.86% | 70 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72090 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.5 x 10-7 | 143 | 26 | 84.62% | 169 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72090 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.12673 x 10-1 | 56 | 22 | 42 | 65 | 71.79% | 60.75% | 78 | 107 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.418956' Avg. expression score for this sample: '390.473' Avg. expression score in LCM sample: '135.588' Tissue used: 'full endosperm' |
|||||
| AT1G72090 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.43108 x 10-1 | 57 | 10 | 49 | 36 | 85.07% | 42.35% | 67 | 85 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.418956' Avg. expression score for this sample: '384.96' Avg. expression score in LCM sample: '135.588' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G72090 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.6841 x 10-2 | 18 | 3 | 85.71% | 21 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72090 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.9138 | 81 | 45 | 64.29% | 126 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72090 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 9.19957 x 10-1 | 75 | 60 | 37 | 26 | 55.56% | 41.27% | 135 | 63 | TAIR8 |
Avg. embryo expression (dissected): '830.554' Avg. embryo expression (LCM): '571.591' |
||||
| AT1G72080 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 0 | 4 | 1 | 100.00% | 20.00% | 1 | 5 | TAIR8 |
Avg. embryo expression (dissected): '4.2664' Avg. embryo expression (LCM): '0' |
||||
| AT1G72080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.5671 | 2 | 2 | 2 | 0 | 50.00% | 0.00% | 4 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.61927' Avg. expression score for this sample: '2.01915' Avg. expression score in LCM sample: '13.4339' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G72080 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.98085 x 10-1 | 19 | 17 | 52.78% | 36 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.61927' Avg. expression score for this sample: '.454381' Avg. expression score in LCM sample: '13.4339' Tissue used: 'full endosperm' |
|||||
| AT1G72080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 9.2725 x 10-2 | 21 | 136 | 13.38% | 157 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G72070 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 8 | 0 | 100.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72070 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.44444 x 10-1 | 10 | 0 | 100.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72070 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | TAIR8 |
Avg. embryo expression (dissected): '7.90436' Avg. embryo expression (LCM): '3.52896' |
||||
| AT1G72070 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 3 | 0 | 1 | 3 | 100.00% | 75.00% | 3 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.323077' Avg. expression score for this sample: '7.27451' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT1G72070 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.323077' Avg. expression score for this sample: '2.1608' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT1G72070 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.7673 x 10-1 | 45 | 1 | 97.83% | 46 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72060 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 40 | 1 | 97.56% | 41 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72060 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3.72548' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT1G72060 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.704066' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT1G72060 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 7 | 0 | 100.00% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72060 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 7 | 0 | 100.00% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72060 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.56931' Avg. embryo expression (LCM): '0' |
|||||
| AT1G72050 | TFIIIA | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.7 x 10-13 | 424 | 139 | 54 | 25 | 75.31% | 31.65% | 563 | 79 | TAIR8 |
Avg. embryo expression (dissected): '329.081' Avg. embryo expression (LCM): '336.218' |
|||
| AT1G72050 | TFIIIA | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.46037 x 10-1 | 195 | 48 | 73 | 80 | 80.25% | 52.29% | 243 | 153 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.046097' Avg. expression score for this sample: '149.218' Avg. expression score in LCM sample: '57.6893' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G72050 | TFIIIA | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.1 x 10-6 | 274 | 60 | 82.04% | 334 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G72050 | TFIIIA | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.8785 x 10-2 | 526 | 83 | 267 | 299 | 86.37% | 52.83% | 609 | 566 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.046097' Avg. expression score for this sample: '209.798' Avg. expression score in LCM sample: '57.6893' Tissue used: 'full endosperm' |
||||
| AT1G72050 | TFIIIA | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.1 x 10-10 | 55 | 76 | 41.98% | 131 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G72050 | TFIIIA | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.8 x 10-4 | 115 | 85 | 57.50% | 200 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G72040 | dNK | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.64241 x 10-1 | 156 | 104 | 60.00% | 260 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G72040 | dNK | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.5406 x 10-1 | 74 | 55 | 57.36% | 129 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G72040 | dNK | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.478 x 10-3 | 772 | 579 | 135 | 103 | 57.14% | 43.28% | 1351 | 238 | TAIR8 |
Avg. embryo expression (dissected): '322.338' Avg. embryo expression (LCM): '329.386' |
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| AT1G72040 | dNK | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.44446 x 10-1 | 373 | 108 | 233 | 259 | 77.55% | 52.64% | 481 | 492 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.101869' Avg. expression score for this sample: '119.084' Avg. expression score in LCM sample: '23.8253' Tissue used: 'full endosperm' |
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| AT1G72040 | dNK | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 9.278 x 10-2 | 183 | 103 | 83 | 111 | 63.99% | 57.22% | 286 | 194 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.101869' Avg. expression score for this sample: '62.7337' Avg. expression score in LCM sample: '23.8253' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G72040 | dNK | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.9 x 10-12 | 445 | 113 | 79.75% | 558 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G72030 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.84 x 10-4 | 46 | 7 | 86.79% | 53 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72030 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.15644 x 10-1 | 84 | 61 | 33 | 90 | 57.93% | 73.17% | 145 | 123 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.34671' Avg. expression score for this sample: '141.281' Avg. expression score in LCM sample: '80.2947' Tissue used: 'full endosperm' |
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| AT1G72030 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.81808 x 10-1 | 55 | 45 | 15 | 36 | 55.00% | 70.59% | 100 | 51 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.34671' Avg. expression score for this sample: '146.912' Avg. expression score in LCM sample: '80.2947' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G72030 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.21133 x 10-1 | 18 | 7 | 72.00% | 25 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72030 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0672 x 10-1 | 10 | 1 | 90.91% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72030 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 9.6383 x 10-2 | 36 | 61 | 14 | 12 | 37.11% | 46.15% | 97 | 26 | TAIR8 |
Avg. embryo expression (dissected): '190.77' Avg. embryo expression (LCM): '214.212' |
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| AT1G72020 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.60334 x 10-1 | 25 | 40 | 6 | 15 | 38.46% | 71.43% | 65 | 21 | TAIR8 |
Avg. embryo expression (dissected): '365.527' Avg. embryo expression (LCM): '296.91' |
||||
| AT1G72020 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.2611 x 10-2 | 28 | 29 | 25 | 32 | 49.12% | 56.14% | 57 | 57 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.920188' Avg. expression score for this sample: '349.519' Avg. expression score in LCM sample: '232.448' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G72020 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.0206 x 10-2 | 84 | 24 | 77.78% | 108 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72020 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.579 x 10-2 | 28 | 10 | 12 | 59 | 73.68% | 83.10% | 38 | 71 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.920188' Avg. expression score for this sample: '181.114' Avg. expression score in LCM sample: '232.448' Tissue used: 'full endosperm' |
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| AT1G72020 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.19 x 10-4 | 92 | 18 | 83.64% | 110 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72020 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.58854 x 10-1 | 44 | 14 | 75.86% | 58 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72010 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.81705 x 10-1 | 10 | 6 | 62.50% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72010 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.2789 x 10-1 | 16 | 5 | 76.19% | 21 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72010 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 9.00544 x 10-1 | 48 | 47 | 15 | 17 | 50.53% | 53.12% | 95 | 32 | TAIR8 |
Avg. embryo expression (dissected): '127.25' Avg. embryo expression (LCM): '49.2673' |
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| AT1G72010 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.1124 x 10-1 | 30 | 8 | 16 | 34 | 78.95% | 68.00% | 38 | 50 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.47607' Avg. expression score for this sample: '33.9747' Avg. expression score in LCM sample: '41.3011' Tissue used: 'full endosperm' |
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| AT1G72010 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.31714 x 10-1 | 78 | 36 | 28 | 60 | 68.42% | 68.18% | 114 | 88 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.47607' Avg. expression score for this sample: '113.42' Avg. expression score in LCM sample: '41.3011' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G72010 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.5 x 10-5 | 56 | 4 | 93.33% | 60 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72000 | A/N-InvF | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 99 | 59 | 62.66% | 158 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G72000 | A/N-InvF | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.111717' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT1G72000 | A/N-InvF | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.1714' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G72000 | A/N-InvF | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 44 | 18 | 70.97% | 62 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G72000 | A/N-InvF | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G72000 | A/N-InvF | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT1G71990 | FUT13 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.13605 x 10-1 | 11 | 13 | 3 | 8 | 45.83% | 72.73% | 24 | 11 | TAIR8 |
Avg. embryo expression (dissected): '158.121' Avg. embryo expression (LCM): '114.245' |
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| AT1G71990 | FUT13 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 15 | 11 | 6 | 19 | 57.69% | 76.00% | 26 | 25 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.34223' Avg. expression score for this sample: '141.083' Avg. expression score in LCM sample: '93.5963' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G71990 | FUT13 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.44603 x 10-1 | 17 | 4 | 4 | 19 | 80.95% | 82.61% | 21 | 23 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.34223' Avg. expression score for this sample: '159.171' Avg. expression score in LCM sample: '93.5963' Tissue used: 'full endosperm' |
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| AT1G71990 | FUT13 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.83082 x 10-1 | 1 | 2 | 33.33% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G71990 | FUT13 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 14 | 5 | 73.68% | 19 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G71990 | FUT13 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.86938 x 10-1 | 10 | 1 | 90.91% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G71980 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G71980 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G71980 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G71980 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '564.904' Avg. embryo expression (LCM): '180.517' |
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| AT1G71980 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '504.985' Avg. expression score in LCM sample: '120.729' Tissue used: 'full endosperm' |
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| AT1G71980 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '357.994' Avg. expression score in LCM sample: '120.729' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G71970 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000035' Avg. expression score for this sample: '3.87054' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G71970 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.3 x 10-5 | 2 | 0 | 0 | 40 | 100.00% | 100.00% | 2 | 40 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000035' Avg. expression score for this sample: '24.3807' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G71970 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.22449 x 10-1 | 5 | 1 | 83.33% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71970 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71970 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.32143 x 10-1 | 12 | 1 | 92.31% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71970 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '4.81375' Avg. embryo expression (LCM): '10.0594' |
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| AT1G71960 | ABCG25 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.35762 x 10-1 | 106 | 81 | 77 | 70 | 56.68% | 47.62% | 187 | 147 | TAIR8 |
Avg. embryo expression (dissected): '184.33' Avg. embryo expression (LCM): '79.3577' |
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| AT1G71960 | ABCG25 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.4 x 10-14 | 906 | 309 | 155 | 687 | 74.57% | 81.59% | 1215 | 842 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '7.9e-11' Avg. expression score for this sample: '686.545' Avg. expression score in LCM sample: '103.914' Tissue used: 'full endosperm' |
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| AT1G71960 | ABCG25 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.88743 x 10-1 | 480 | 263 | 202 | 534 | 64.60% | 72.55% | 743 | 736 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '7.9e-11' Avg. expression score for this sample: '426.896' Avg. expression score in LCM sample: '103.914' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G71960 | ABCG25 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 748 | 8 | 98.94% | 756 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G71960 | ABCG25 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 9.46727 x 10-1 | 231 | 83 | 73.57% | 314 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G71960 | ABCG25 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.20395 x 10-1 | 151 | 49 | 75.50% | 200 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G71950 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.49565 x 10-1 | 54 | 9 | 85.71% | 63 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71950 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.5233 x 10-2 | 216 | 86 | 71.52% | 302 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71950 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.3981 x 10-1 | 221 | 85 | 72.22% | 306 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G71950 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.79426 x 10-1 | 45 | 39 | 9 | 9 | 53.57% | 50.00% | 84 | 18 | TAIR8 |
Avg. embryo expression (dissected): '74.8989' Avg. embryo expression (LCM): '15.761' |
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| AT1G71950 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.45217 x 10-1 | 80 | 38 | 23 | 71 | 67.80% | 75.53% | 118 | 94 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000172' Avg. expression score for this sample: '120.665' Avg. expression score in LCM sample: '34.8488' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G71950 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.8 x 10-5 | 124 | 42 | 29 | 163 | 74.70% | 84.90% | 166 | 192 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000172' Avg. expression score for this sample: '153.988' Avg. expression score in LCM sample: '34.8488' Tissue used: 'full endosperm' |