Displaying data sets 130301 - 130400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G72750 TIM23-2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.88853 x 10-1 24 20 2 4 54.55% 66.67% 44 6 TAIR8 Avg. embryo expression (dissected): '703.54'
Avg. embryo expression (LCM): '644.72'
AT1G72750 TIM23-2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4549 x 10-2 92 14 86.79% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.14 x 10-4 128 20 86.49% 148 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.205 x 10-3 33 3 91.67% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.25084 x 10-1 45 12 78.95% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.35475 x 10-1 32 49 18 11 39.51% 37.93% 81 29 TAIR8 Avg. embryo expression (dissected): '114.493'
Avg. embryo expression (LCM): '118.829'
AT1G72740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.7778 x 10-2 70 12 20 41 85.37% 67.21% 82 61 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.261456'
Avg. expression score for this sample: '129.936'
Avg. expression score in LCM sample: '79.1483'
Tissue used: 'full endosperm'
AT1G72740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.94136 x 10-1 30 17 27 51 63.83% 65.38% 47 78 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.261456'
Avg. expression score for this sample: '103.994'
Avg. expression score in LCM sample: '79.1483'
Tissue used: 'pure endosperm, no chalazal'
AT1G72730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 0 2 1 100.00% 33.33% 7 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '23.7698'
Avg. expression score in LCM sample: '31.8357'
Tissue used: 'pure endosperm, no chalazal'
AT1G72730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28656 x 10-1 16 10 1 2 61.54% 66.67% 26 3 TAIR8 Avg. embryo expression (dissected): '63.6296'
Avg. embryo expression (LCM): '129.215'
AT1G72730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 3 4 66.67% 57.14% 3 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.1312'
Avg. expression score in LCM sample: '31.8357'
Tissue used: 'full endosperm'
AT1G72730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.11653 x 10-1 11 1 91.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.33364 x 10-1 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72720 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72720 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '18.7516'
Avg. expression score in LCM sample: '2.29287'
Tissue used: 'full endosperm'
AT1G72720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.42954'
Avg. expression score in LCM sample: '2.29287'
Tissue used: 'pure endosperm, no chalazal'
AT1G72720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '16.5053'
Avg. embryo expression (LCM): '5.88997'
AT1G72720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72710 CKL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72710 CKL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72710 CKL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72710 CKL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '108.01'
Avg. embryo expression (LCM): '123.652'
AT1G72710 CKL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '104.949'
Avg. expression score in LCM sample: '41.1395'
Tissue used: 'full endosperm'
AT1G72710 CKL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '58.6623'
Avg. expression score in LCM sample: '41.1395'
Tissue used: 'pure endosperm, no chalazal'
AT1G72700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 20 7 14 20 74.07% 58.82% 27 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '145.928'
Avg. expression score in LCM sample: '90.7596'
Tissue used: 'pure endosperm, no chalazal'
AT1G72700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 10 4 8 44.44% 66.67% 18 12 TAIR8 Avg. embryo expression (dissected): '96.9479'
Avg. embryo expression (LCM): '58.9625'
AT1G72700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.8111 x 10-1 19 14 18 51 57.58% 73.91% 33 69 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '290.588'
Avg. expression score in LCM sample: '90.7596'
Tissue used: 'full endosperm'
AT1G72700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.42 x 10-4 38 2 95.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.20403 x 10-1 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.033 x 10-3 26 1 96.30% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.89847 x 10-1 9 2 0 4 81.82% 100.00% 11 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.040215'
Avg. expression score for this sample: '73.774'
Avg. expression score in LCM sample: '2.91019'
Tissue used: 'full endosperm'
AT1G72690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.1 4 0 0 4 100.00% 100.00% 4 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.040215'
Avg. expression score for this sample: '26.0492'
Avg. expression score in LCM sample: '2.91019'
Tissue used: 'pure endosperm, no chalazal'
AT1G72690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '13.6207'
Avg. embryo expression (LCM): '17.4062'
AT1G72690 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.98718 x 10-1 17 0 100.00% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72680 CAD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.7 x 10-14 419 35 92.29% 454 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72680 CAD1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.24195 x 10-1 11 7 61.11% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72680 CAD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 74 29 71.84% 103 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72680 CAD1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.82987 x 10-1 45 36 14 12 55.56% 46.15% 81 26 TAIR8 Avg. embryo expression (dissected): '132.22'
Avg. embryo expression (LCM): '93.5237'
AT1G72680 CAD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.7821 x 10-2 86 16 36 70 84.31% 66.04% 102 106 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.282927'
Avg. expression score for this sample: '150.206'
Avg. expression score in LCM sample: '32.3942'
Tissue used: 'full endosperm'
AT1G72680 CAD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.2925 x 10-1 32 16 16 20 66.67% 55.56% 48 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.282927'
Avg. expression score for this sample: '70.0099'
Avg. expression score in LCM sample: '32.3942'
Tissue used: 'pure endosperm, no chalazal'
AT1G72670 iqd8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.78895 x 10-1 1 7 0 2 12.50% 100.00% 8 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.272303'
Avg. expression score for this sample: '93.4196'
Avg. expression score in LCM sample: '44.5053'
Tissue used: 'pure endosperm, no chalazal'
AT1G72670 iqd8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 5 2 2 37.50% 50.00% 8 4 TAIR8 Avg. embryo expression (dissected): '435.884'
Avg. embryo expression (LCM): '290.58'
AT1G72670 iqd8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 1 2 50.00% 66.67% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.272303'
Avg. expression score for this sample: '42.503'
Avg. expression score in LCM sample: '44.5053'
Tissue used: 'full endosperm'
AT1G72670 iqd8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72670 iqd8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72670 iqd8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.196 x 10-3 23 5 0 27 82.14% 100.00% 28 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.006242'
Avg. expression score for this sample: '33.6182'
Avg. expression score in LCM sample: '.970062'
Tissue used: 'full endosperm'
AT1G72660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.6749 x 10-1 7 1 6 16 87.50% 72.73% 8 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.006242'
Avg. expression score for this sample: '39.448'
Avg. expression score in LCM sample: '.970062'
Tissue used: 'pure endosperm, no chalazal'
AT1G72660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.57862 x 10-1 6 8 4 3 42.86% 42.86% 14 7 TAIR8 Avg. embryo expression (dissected): '40.8846'
Avg. embryo expression (LCM): '0'
AT1G72660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72650 TRFL6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-11 263 24 91.64% 287 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72650 TRFL6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.4 x 10-5 167 25 86.98% 192 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72650 TRFL6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.29067 x 10-1 31 13 70.45% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72650 TRFL6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.10638 x 10-1 37 30 10 18 55.22% 64.29% 67 28 TAIR8 Avg. embryo expression (dissected): '270.061'
Avg. embryo expression (LCM): '156.857'
AT1G72650 TRFL6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.52 x 10-3 128 36 52 160 78.05% 75.47% 164 212 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.032884'
Avg. expression score for this sample: '256.947'
Avg. expression score in LCM sample: '141.82'
Tissue used: 'full endosperm'
AT1G72650 TRFL6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.45712 x 10-1 71 39 28 52 64.55% 65.00% 110 80 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.032884'
Avg. expression score for this sample: '307.595'
Avg. expression score in LCM sample: '141.82'
Tissue used: 'pure endosperm, no chalazal'
AT1G72645 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.80172 x 10-1 6 4 2 0 60.00% 0.00% 10 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.37526'
Avg. expression score for this sample: '22.1675'
Avg. expression score in LCM sample: '7.01091'
Tissue used: 'pure endosperm, no chalazal'
AT1G72645 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.82051 x 10-1 4 0 1 2 100.00% 66.67% 4 3 TAIR8 Avg. embryo expression (dissected): '55.6899'
Avg. embryo expression (LCM): '8.99194'
AT1G72645 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.99553 x 10-1 15 5 8 3 75.00% 27.27% 20 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.37526'
Avg. expression score for this sample: '55.0374'
Avg. expression score in LCM sample: '7.01091'
Tissue used: 'full endosperm'
AT1G72645 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.54545 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72645 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.54545 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72645 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72640 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72640 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.23077 x 10-1 3 1 0 4 75.00% 100.00% 4 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.747527'
Avg. expression score for this sample: '118.751'
Avg. expression score in LCM sample: '20.0627'
Tissue used: 'full endosperm'
AT1G72640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.20347 x 10-1 4 2 6 0 66.67% 0.00% 6 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.747527'
Avg. expression score for this sample: '270.563'
Avg. expression score in LCM sample: '20.0627'
Tissue used: 'pure endosperm, no chalazal'
AT1G72640 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.0909 x 10-2 4 0 0 2 100.00% 100.00% 4 2 TAIR8 Avg. embryo expression (dissected): '511.13'
Avg. embryo expression (LCM): '254.826'
AT1G72640 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72630 ELF4-L2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72630 ELF4-L2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72630 ELF4-L2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72630 ELF4-L2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 2.82051 x 10-1 6 1 0 0 85.71% 7 0 TAIR8 Avg. embryo expression (dissected): '18.4523'
Avg. embryo expression (LCM): '56.1871'
AT1G72630 ELF4-L2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 3 1 100.00% 25.00% 2 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '10.8239'
Avg. expression score in LCM sample: '4.9385'
Tissue used: 'full endosperm'
AT1G72630 ELF4-L2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.34658'
Avg. expression score in LCM sample: '4.9385'
Tissue used: 'pure endosperm, no chalazal'
AT1G72620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.249048'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G72620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.9785'
Avg. embryo expression (LCM): '0'
AT1G72620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.851665'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G72620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72610 GER1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72610 GER1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72610 GER1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '26.826'
Avg. expression score in LCM sample: '26.8678'
Tissue used: 'full endosperm'
AT1G72610 GER1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '35.5817'
Avg. expression score in LCM sample: '26.8678'
Tissue used: 'pure endosperm, no chalazal'
AT1G72610 GER1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '33.9235'
Avg. embryo expression (LCM): '10.8004'
AT1G72610 GER1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G72600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.23004'
Avg. embryo expression (LCM): '0'
AT1G72600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.24503 x 10-1 10 0 2 5 100.00% 71.43% 10 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.127386'
Avg. expression score for this sample: '11.3489'
Avg. expression score in LCM sample: '4.98259'
Tissue used: 'full endosperm'
AT1G72600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.127386'
Avg. expression score for this sample: '9.18901'
Avg. expression score in LCM sample: '4.98259'
Tissue used: 'pure endosperm, no chalazal'
AT1G72590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.99209'
Avg. expression score in LCM sample: '29.6751'
Tissue used: 'pure endosperm, no chalazal'
AT1G72590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '1.20562'