| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G73220 | OCT1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.3 x 10-11 | 131 | 0 | 100.00% | 131 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G73220 | OCT1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.285 x 10-3 | 83 | 6 | 93.26% | 89 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G73210 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.65893 x 10-1 | 132 | 56 | 70.21% | 188 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73210 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.86724 x 10-1 | 131 | 55 | 63 | 136 | 70.43% | 68.34% | 186 | 199 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.16041' Avg. expression score for this sample: '516.722' Avg. expression score in LCM sample: '354.44' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73210 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.41694 x 10-1 | 43 | 12 | 24 | 15 | 78.18% | 38.46% | 55 | 39 | TAIR8 |
Avg. embryo expression (dissected): '250.346' Avg. embryo expression (LCM): '63.2073' |
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| AT1G73210 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.41186 x 10-1 | 313 | 154 | 142 | 354 | 67.02% | 71.37% | 467 | 496 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.16041' Avg. expression score for this sample: '658.205' Avg. expression score in LCM sample: '354.44' Tissue used: 'full endosperm' |
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| AT1G73210 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.376 x 10-2 | 187 | 59 | 76.02% | 246 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73210 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.39866 x 10-1 | 89 | 37 | 70.63% | 126 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73200 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.41895 x 10-1 | 148 | 65 | 69.48% | 213 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73200 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.15466 x 10-1 | 141 | 32 | 81.50% | 173 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73200 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.88883 x 10-1 | 16 | 4 | 80.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73200 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.04572 x 10-1 | 53 | 17 | 22 | 52 | 75.71% | 70.27% | 70 | 74 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.078168' Avg. expression score for this sample: '115.846' Avg. expression score in LCM sample: '23.7224' Tissue used: 'full endosperm' |
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| AT1G73200 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.27243 x 10-1 | 16 | 13 | 10 | 3 | 55.17% | 23.08% | 29 | 13 | TAIR8 |
Avg. embryo expression (dissected): '66.8121' Avg. embryo expression (LCM): '37.4999' |
||||
| AT1G73200 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.60132 x 10-1 | 39 | 10 | 8 | 24 | 79.59% | 75.00% | 49 | 32 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.078168' Avg. expression score for this sample: '74.9508' Avg. expression score in LCM sample: '23.7224' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73190 | TIP3;1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.449482' Avg. expression score for this sample: '142.537' Avg. expression score in LCM sample: '1.24932' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73190 | TIP3;1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '57.5786' Avg. embryo expression (LCM): '0' |
|||||
| AT1G73190 | TIP3;1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.28308 x 10-1 | 0 | 3 | 4 | 6 | 0.00% | 60.00% | 3 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.449482' Avg. expression score for this sample: '469.194' Avg. expression score in LCM sample: '1.24932' Tissue used: 'full endosperm' |
||||
| AT1G73190 | TIP3;1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G73190 | TIP3;1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73190 | TIP3;1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.66667 x 10-1 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G73180 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.9339 x 10-1 | 12 | 6 | 66.67% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73180 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.56273 x 10-1 | 70 | 36 | 21 | 58 | 66.04% | 73.42% | 106 | 79 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.49459' Avg. expression score for this sample: '150.393' Avg. expression score in LCM sample: '53.4269' Tissue used: 'full endosperm' |
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| AT1G73180 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.94619 x 10-1 | 17 | 20 | 8 | 6 | 45.95% | 42.86% | 37 | 14 | TAIR8 |
Avg. embryo expression (dissected): '175.371' Avg. embryo expression (LCM): '179.311' |
||||
| AT1G73180 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.85003 x 10-1 | 20 | 6 | 10 | 21 | 76.92% | 67.74% | 26 | 31 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.49459' Avg. expression score for this sample: '100.85' Avg. expression score in LCM sample: '53.4269' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G73180 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.7679 x 10-2 | 142 | 35 | 80.23% | 177 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73180 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.6627 x 10-2 | 105 | 26 | 80.15% | 131 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73177 | BNS | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.74136 x 10-1 | 21 | 12 | 63.64% | 33 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G73177 | BNS | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.9953 x 10-1 | 44 | 13 | 77.19% | 57 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G73177 | BNS | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.94774 x 10-1 | 8 | 0 | 100.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G73177 | BNS | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.80172 x 10-1 | 3 | 2 | 4 | 3 | 60.00% | 42.86% | 5 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.424316' Avg. expression score for this sample: '103.392' Avg. expression score in LCM sample: '37.7736' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73177 | BNS | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 6 | 7 | 1 | 1 | 46.15% | 50.00% | 13 | 2 | TAIR8 |
Avg. embryo expression (dissected): '212.369' Avg. embryo expression (LCM): '237.671' |
|||
| AT1G73177 | BNS | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.69354 x 10-1 | 13 | 10 | 9 | 49 | 56.52% | 84.48% | 23 | 58 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.424316' Avg. expression score for this sample: '116.759' Avg. expression score in LCM sample: '37.7736' Tissue used: 'full endosperm' |
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| AT1G73170 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.76471 x 10-1 | 4 | 0 | 1 | 4 | 100.00% | 80.00% | 4 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '79.2036' Avg. expression score in LCM sample: '54.7497' Tissue used: 'full endosperm' |
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| AT1G73170 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 0 | 1 | 1 | 0 | 0.00% | 0.00% | 1 | 1 | TAIR8 |
Avg. embryo expression (dissected): '148.532' Avg. embryo expression (LCM): '99.0369' |
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| AT1G73170 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 2 | 1 | 100.00% | 33.33% | 1 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '130.842' Avg. expression score in LCM sample: '54.7497' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73170 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G73170 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 1 | 80.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73170 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G73165 | CLE1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73165 | CLE1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73165 | CLE1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT1G73165 | CLE1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G73165 | CLE1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73165 | CLE1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73160 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G73160 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G73160 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G73160 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.238395' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G73160 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.397701' Avg. embryo expression (LCM): '0' |
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| AT1G73160 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73150 | GTE3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '63.2825' Avg. expression score in LCM sample: '30.0278' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73150 | GTE3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '66.4028' Avg. embryo expression (LCM): '73.317' |
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| AT1G73150 | GTE3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '82.8952' Avg. expression score in LCM sample: '30.0278' Tissue used: 'full endosperm' |
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| AT1G73150 | GTE3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73150 | GTE3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73150 | GTE3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73140 | TBL31 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73140 | TBL31 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '6.67967' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G73140 | TBL31 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '2.11477' Avg. embryo expression (LCM): '0' |
|||||
| AT1G73140 | TBL31 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.390578' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73140 | TBL31 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73140 | TBL31 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73130 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.18857 x 10-1 | 51 | 8 | 86.44% | 59 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73130 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 70 | 18 | 79.55% | 88 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73130 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.07071 x 10-1 | 9 | 0 | 100.00% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73130 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.36749 x 10-1 | 15 | 6 | 10 | 24 | 71.43% | 70.59% | 21 | 34 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.022165' Avg. expression score for this sample: '39.9103' Avg. expression score in LCM sample: '44.7698' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73130 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 3 | 2 | 2 | 0 | 60.00% | 0.00% | 5 | 2 | TAIR8 |
Avg. embryo expression (dissected): '10.8778' Avg. embryo expression (LCM): '8.43936' |
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| AT1G73130 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.316 x 10-3 | 27 | 6 | 7 | 46 | 81.82% | 86.79% | 33 | 53 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.022165' Avg. expression score for this sample: '51.7146' Avg. expression score in LCM sample: '44.7698' Tissue used: 'full endosperm' |
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| AT1G73120 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 2 | 2 | 100.00% | 50.00% | 1 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '7.86213' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G73120 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 1 | 0 | 1 | 50.00% | 100.00% | 2 | 1 | TAIR8 |
Avg. embryo expression (dissected): '8.97993' Avg. embryo expression (LCM): '0' |
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| AT1G73120 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.35913' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73120 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 2 | 71.43% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73120 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.44444 x 10-1 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73120 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.85714 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '6.6826' Avg. expression score in LCM sample: '3.80676' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73110 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 3 | 1 | 1 | 25.00% | 50.00% | 4 | 2 | TAIR8 |
Avg. embryo expression (dissected): '28.9042' Avg. embryo expression (LCM): '18.7123' |
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| AT1G73110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 4 | 0 | 1 | 1 | 100.00% | 50.00% | 4 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '16.2048' Avg. expression score in LCM sample: '3.80676' Tissue used: 'full endosperm' |
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| AT1G73110 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.04396 x 10-1 | 6 | 3 | 66.67% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73100 | SUVH3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G73100 | SUVH3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73100 | SUVH3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.30882 x 10-1 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G73100 | SUVH3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.54545 x 10-1 | 1 | 0 | 0 | 5 | 100.00% | 100.00% | 1 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.389847' Avg. expression score for this sample: '234.084' Avg. expression score in LCM sample: '146.92' Tissue used: 'full endosperm' |
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| AT1G73100 | SUVH3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 2 | 5 | 0 | 2 | 28.57% | 100.00% | 7 | 2 | TAIR8 |
Avg. embryo expression (dissected): '317.805' Avg. embryo expression (LCM): '627.665' |
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| AT1G73100 | SUVH3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 6 | 0 | 2 | 1 | 100.00% | 33.33% | 6 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.389847' Avg. expression score for this sample: '136.6' Avg. expression score in LCM sample: '146.92' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73090 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.49887 x 10-1 | 4 | 7 | 4 | 6 | 36.36% | 60.00% | 11 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.236285' Avg. expression score for this sample: '14.5925' Avg. expression score in LCM sample: '11.6701' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73090 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.75923 x 10-1 | 32 | 29 | 10 | 11 | 52.46% | 52.38% | 61 | 21 | TAIR8 |
Avg. embryo expression (dissected): '78.4634' Avg. embryo expression (LCM): '60.9593' |
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| AT1G73090 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.15987 x 10-1 | 6 | 4 | 3 | 3 | 60.00% | 50.00% | 10 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.236285' Avg. expression score for this sample: '28.0891' Avg. expression score in LCM sample: '11.6701' Tissue used: 'full endosperm' |
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| AT1G73090 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.62678 x 10-1 | 5 | 9 | 35.71% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73090 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.75386 x 10-1 | 7 | 3 | 70.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73090 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.17656 x 10-1 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73080 | PEPR1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.6195 x 10-2 | 90 | 8 | 91.84% | 98 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G73080 | PEPR1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.1 x 10-16 | 225 | 45 | 51 | 345 | 83.33% | 87.12% | 270 | 396 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '5.2e-17' Avg. expression score for this sample: '821.83' Avg. expression score in LCM sample: '98.9464' Tissue used: 'full endosperm' |
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| AT1G73080 | PEPR1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 78 | 78 | 13 | 12 | 50.00% | 48.00% | 156 | 25 | TAIR8 |
Avg. embryo expression (dissected): '375.839' Avg. embryo expression (LCM): '145.755' |
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| AT1G73080 | PEPR1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.33 x 10-4 | 175 | 50 | 51 | 165 | 77.78% | 76.39% | 225 | 216 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '5.2e-17' Avg. expression score for this sample: '690.984' Avg. expression score in LCM sample: '98.9464' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73080 | PEPR1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.9 x 10-23 | 348 | 2 | 99.43% | 350 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G73080 | PEPR1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.3 x 10-23 | 463 | 8 | 98.30% | 471 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G73066 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.3287 | 18 | 3 | 85.71% | 21 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73066 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.43021 x 10-1 | 11 | 3 | 78.57% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |