GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G157873	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	1	0	100.00%	0.00%	1	1	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G157873	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G157822	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G157822	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	4	0.00%	100.00%	2	4	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G157820	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	15	12	8	8	55.56%	50.00%	27	16	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G157820	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	MEG	2.6998 x 10^-3	30	0	0	18	100.00%	100.00%	30	18	RefGen V2	χ2 p-value for B73 x Mo17: '.0001075' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: ''
GRMZM2G157806	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G157806	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.19 x 10^-21	514	212	290	102	70.80%	26.02%	726	392	RefGen V2	χ2 p-value for B73 x Mo17: '3.71e-29' χ2 p-value for Mo17 x B73: '2.19e-21' Biased in favor of strain: 'B73'
GRMZM2G157760	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	6	5	1	0.00%	16.67%	6	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: ''
GRMZM2G157760	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.58613 x 10^-2	5	12	2	20	29.41%	90.91%	17	22	RefGen V2	χ2 p-value for B73 x Mo17: '.00112' χ2 p-value for Mo17 x B73: '.0158613' Biased in favor of strain: ''
GRMZM2G157758	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.1 x 10^-7	1018	374	604	786	73.13%	56.55%	1392	1390	RefGen V2	χ2 p-value for B73 x Mo17: '3.10e-07' χ2 p-value for Mo17 x B73: '1.21e-15' Biased in favor of strain: 'B73'
GRMZM2G157758	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0 x 10^-6	1175	799	1083	867	59.52%	44.46%	1974	1950	RefGen V2	χ2 p-value for B73 x Mo17: '2.61e-17' χ2 p-value for Mo17 x B73: '1.00e-06' Biased in favor of strain: 'B73'
GRMZM2G157749	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.32 x 10^-15	217	81	208	65	72.82%	23.81%	298	273	RefGen V2	χ2 p-value for B73 x Mo17: '3.32e-15' χ2 p-value for Mo17 x B73: '4.94e-18' Biased in favor of strain: 'B73'
GRMZM2G157749	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	3.8767 x 10^-3	22	25	109	19	46.81%	14.84%	47	128	RefGen V2	χ2 p-value for B73 x Mo17: '.0038767' χ2 p-value for Mo17 x B73: '1.64e-35' Biased in favor of strain: ''
GRMZM2G157729	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.90582 x 10^-2	68	20	46	64	77.27%	58.18%	88	110	RefGen V2	χ2 p-value for B73 x Mo17: '.0348117' χ2 p-value for Mo17 x B73: '.0590582' Biased in favor of strain: ''
GRMZM2G157729	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.401743 x 10^-1	92	75	72	61	55.09%	45.86%	167	133	RefGen V2	χ2 p-value for B73 x Mo17: '.1883421' χ2 p-value for Mo17 x B73: '.3401743' Biased in favor of strain: ''
GRMZM2G157727	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.680826 x 10^-1	45	27	24	22	62.50%	47.83%	72	46	RefGen V2	χ2 p-value for B73 x Mo17: '.0338949' χ2 p-value for Mo17 x B73: '.7680826' Biased in favor of strain: ''
GRMZM2G157727	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.172992 x 10^-1	10	8	1	17	55.56%	94.44%	18	18	RefGen V2	χ2 p-value for B73 x Mo17: '.3172992' χ2 p-value for Mo17 x B73: '.0124193' Biased in favor of strain: ''
GRMZM2G157722	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	1		50.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G157722	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	1	100.00%	100.00%	2	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G157683	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	5		100.00%	0	5	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: ''
GRMZM2G157683	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	0	4	0.00%	100.00%	3	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G157679	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.1 x 10^-9	482	139	224	205	77.62%	47.79%	621	429	RefGen V2	χ2 p-value for B73 x Mo17: '7.10e-09' χ2 p-value for Mo17 x B73: '1.08e-16' Biased in favor of strain: 'B73'
GRMZM2G157679	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.01 x 10^-13	439	250	641	371	63.72%	36.66%	689	1012	RefGen V2	χ2 p-value for B73 x Mo17: '6.01e-13' χ2 p-value for Mo17 x B73: '2.11e-17' Biased in favor of strain: 'B73'
GRMZM2G157675	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	6	3	66.67%	33.33%	3	9	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G157675	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.43046 x 10^-2	12	15	2	33	44.44%	94.29%	27	35	RefGen V2	χ2 p-value for B73 x Mo17: '.0143046' χ2 p-value for Mo17 x B73: '.0005279' Biased in favor of strain: ''
GRMZM2G157631	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.27 x 10^-15	576	139	402	389	80.56%	49.18%	715	791	RefGen V2	χ2 p-value for B73 x Mo17: '3.27e-15' χ2 p-value for Mo17 x B73: '1.74e-25' Biased in favor of strain: 'B73'
GRMZM2G157631	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.67 x 10^-20	744	294	600	320	71.68%	34.78%	1038	920	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.67e-20' Biased in favor of strain: 'B73'
GRMZM2G157621	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.197414 x 10^-1	103	96	75	105	51.76%	58.33%	199	180	RefGen V2	χ2 p-value for B73 x Mo17: '.6197414' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: ''
GRMZM2G157621	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.230219 x 10^-1	321	162	198	336	66.46%	62.92%	483	534	RefGen V2	χ2 p-value for B73 x Mo17: '.9230219' χ2 p-value for Mo17 x B73: '.0663619' Biased in favor of strain: ''
GRMZM2G157605	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.41 x 10^-19	98	147	76	471	40.00%	86.11%	245	547	RefGen V2	χ2 p-value for B73 x Mo17: '8.41e-19' χ2 p-value for Mo17 x B73: '5.18e-22' Biased in favor of strain: 'Mo17'
GRMZM2G157605	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.217555 x 10^-1	242	260	214	255	48.21%	54.37%	502	469	RefGen V2	χ2 p-value for B73 x Mo17: '.4217555' χ2 p-value for Mo17 x B73: '.0583307' Biased in favor of strain: ''
GRMZM2G157598	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.02 x 10^-11	391	174	281	144	69.20%	33.88%	565	425	RefGen V2	χ2 p-value for B73 x Mo17: '6.90e-20' χ2 p-value for Mo17 x B73: '3.02e-11' Biased in favor of strain: 'B73'
GRMZM2G157598	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.14 x 10^-10	243	47	145	101	83.79%	41.06%	290	246	RefGen V2	χ2 p-value for B73 x Mo17: '6.14e-10' χ2 p-value for Mo17 x B73: '1.58e-17' Biased in favor of strain: 'B73'
GRMZM2G157596	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.32 x 10^-7	381	108	187	154	77.91%	45.16%	489	341	RefGen V2	χ2 p-value for B73 x Mo17: '1.32e-07' χ2 p-value for Mo17 x B73: '3.63e-17' Biased in favor of strain: 'B73'
GRMZM2G157596	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.14 x 10^-15	331	158	353	161	67.69%	31.32%	489	514	RefGen V2	χ2 p-value for B73 x Mo17: '5.14e-15' χ2 p-value for Mo17 x B73: '2.48e-17' Biased in favor of strain: 'B73'
GRMZM2G157588	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.9 x 10^-13	421	203	408	226	67.47%	35.65%	624	634	RefGen V2	χ2 p-value for B73 x Mo17: '2.62e-18' χ2 p-value for Mo17 x B73: '4.90e-13' Biased in favor of strain: 'B73'
GRMZM2G157588	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.181 x 10^-4	288	91	231	150	75.99%	39.37%	379	381	RefGen V2	χ2 p-value for B73 x Mo17: '.0001181' χ2 p-value for Mo17 x B73: '1.27e-29' Biased in favor of strain: 'B73'
GRMZM2G157580	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.896976 x 10^-1	46	63	63	110	42.20%	63.58%	109	173	RefGen V2	χ2 p-value for B73 x Mo17: '6.02e-08' χ2 p-value for Mo17 x B73: '.3896976' Biased in favor of strain: ''
GRMZM2G157580	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.470814 x 10^-1	113	114	109	76	49.78%	41.08%	227	185	RefGen V2	χ2 p-value for B73 x Mo17: '.9470814' χ2 p-value for Mo17 x B73: '.0152575' Biased in favor of strain: ''
GRMZM2G157574	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.06 x 10^-5	147	72	137	75	67.12%	35.38%	219	212	RefGen V2	χ2 p-value for B73 x Mo17: '4.02e-07' χ2 p-value for Mo17 x B73: '.0000206' Biased in favor of strain: 'B73'
GRMZM2G157574	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.65 x 10^-9	155	22	94	38	87.57%	28.79%	177	132	RefGen V2	χ2 p-value for B73 x Mo17: '3.65e-09' χ2 p-value for Mo17 x B73: '2.66e-20' Biased in favor of strain: 'B73'
GRMZM2G157564	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	2	6	3	60.00%	33.33%	5	9	RefGen V2	χ2 p-value for B73 x Mo17: '.7518208' χ2 p-value for Mo17 x B73: '.0338948' Biased in favor of strain: ''
GRMZM2G157564	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.037417 x 10^-1	46	24	50	35	65.71%	41.18%	70	85	RefGen V2	χ2 p-value for B73 x Mo17: '.008551' χ2 p-value for Mo17 x B73: '.1037417' Biased in favor of strain: ''
GRMZM2G157536	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.11767 x 10^-2	119	86	102	65	58.05%	38.92%	205	167	RefGen V2	χ2 p-value for B73 x Mo17: '.0211767' χ2 p-value for Mo17 x B73: '.0041946' Biased in favor of strain: 'B73'
GRMZM2G157536	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.710998 x 10^-1	8	2	9	9	80.00%	50.00%	10	18	RefGen V2	χ2 p-value for B73 x Mo17: '.3710998' χ2 p-value for Mo17 x B73: '.1336143' Biased in favor of strain: ''
GRMZM2G157510	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173104 x 10^-1	13	1	8	10	92.86%	55.56%	14	18	RefGen V2	χ2 p-value for B73 x Mo17: '.0376363' χ2 p-value for Mo17 x B73: '.3173104' Biased in favor of strain: ''
GRMZM2G157510	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.3855 x 10^-3	51	26	45	16	66.23%	26.23%	77	61	RefGen V2	χ2 p-value for B73 x Mo17: '.0043855' χ2 p-value for Mo17 x B73: '.0002048' Biased in favor of strain: 'B73'
GRMZM2G157505	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	26444	12146	24742	9643	68.53%	28.04%	38590	34385	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G157505	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.45 x 10^-17	200	13	134	65	93.90%	32.66%	213	199	RefGen V2	χ2 p-value for B73 x Mo17: '3.45e-17' χ2 p-value for Mo17 x B73: '2.55e-24' Biased in favor of strain: 'B73'
GRMZM2G157481	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.99 x 10^-9	638	111	239	284	85.18%	54.30%	749	523	RefGen V2	χ2 p-value for B73 x Mo17: '6.05e-27' χ2 p-value for Mo17 x B73: '1.99e-09' Biased in favor of strain: 'B73'
GRMZM2G157481	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.107708 x 10^-1	115	97	117	102	54.25%	46.58%	212	219	RefGen V2	χ2 p-value for B73 x Mo17: '.2163675' χ2 p-value for Mo17 x B73: '.3107708' Biased in favor of strain: ''
GRMZM2G157470	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.230175 x 10^-1	27	10	20	13	72.97%	39.39%	37	33	RefGen V2	χ2 p-value for B73 x Mo17: '.0051935' χ2 p-value for Mo17 x B73: '.2230175' Biased in favor of strain: ''
GRMZM2G157470	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.047608 x 10^-1	16	3	23	18	84.21%	43.90%	19	41	RefGen V2	χ2 p-value for B73 x Mo17: '.1047608' χ2 p-value for Mo17 x B73: '.0019876' Biased in favor of strain: ''
GRMZM2G157462	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.30062 x 10^-2	122	39	72	104	75.78%	59.09%	161	176	RefGen V2	χ2 p-value for B73 x Mo17: '.0142076' χ2 p-value for Mo17 x B73: '.0330062' Biased in favor of strain: ''
GRMZM2G157462	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.976354 x 10^-1	75	80	51	55	48.39%	51.89%	155	106	RefGen V2	χ2 p-value for B73 x Mo17: '.6879713' χ2 p-value for Mo17 x B73: '.6976354' Biased in favor of strain: ''
GRMZM2G157458	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	2	1	1	66.67%	50.00%	6	2	RefGen V2	χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G157458	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	1	0	0	80.00%		5	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G157443	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.85577 x 10^-2	12360	5991	7534	13147	67.35%	63.57%	18351	20681	RefGen V2	χ2 p-value for B73 x Mo17: '.0485577' χ2 p-value for Mo17 x B73: '3.54e-21' Biased in favor of strain: ''
GRMZM2G157443	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	14242	9468	11943	9068	60.07%	43.16%	23710	21011	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G157422	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	3	6	0	57.14%	0.00%	7	6	RefGen V2	χ2 p-value for B73 x Mo17: '.705457' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G157422	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	3	5	7	62.50%	58.33%	8	12	RefGen V2	χ2 p-value for B73 x Mo17: '.8025764' χ2 p-value for Mo17 x B73: '.5402912' Biased in favor of strain: ''
GRMZM2G157369	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	3	0	2	57.14%	100.00%	7	2	RefGen V2	χ2 p-value for B73 x Mo17: '.5929702' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G157369	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.473896 x 10^-1	15	7	13	14	68.18%	51.85%	22	27	RefGen V2	χ2 p-value for B73 x Mo17: '.0880815' χ2 p-value for Mo17 x B73: '.8473896' Biased in favor of strain: ''
GRMZM2G157354	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.15 x 10^-5	386	199	252	168	65.98%	40.00%	585	420	RefGen V2	χ2 p-value for B73 x Mo17: '1.06e-14' χ2 p-value for Mo17 x B73: '.0000415' Biased in favor of strain: 'B73'
GRMZM2G157354	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.52 x 10^-9	742	239	548	467	75.64%	46.01%	981	1015	RefGen V2	χ2 p-value for B73 x Mo17: '2.52e-09' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G157350	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.0278 x 10^-2	47	11	14	4	81.03%	22.22%	58	18	RefGen V2	χ2 p-value for B73 x Mo17: '.020278' χ2 p-value for Mo17 x B73: '.0000633' Biased in favor of strain: ''
GRMZM2G157350	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	0	4	1	100.00%	20.00%	7	5	RefGen V2	χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G157332	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.74281 x 10^-2	352	226	242	290	60.90%	54.51%	578	532	RefGen V2	χ2 p-value for B73 x Mo17: '1.60e-07' χ2 p-value for Mo17 x B73: '.0374281' Biased in favor of strain: ''
GRMZM2G157332	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.369967 x 10^-1	1960	935	1539	2020	67.70%	56.76%	2895	3559	RefGen V2	χ2 p-value for B73 x Mo17: '.2369967' χ2 p-value for Mo17 x B73: '4.49e-36' Biased in favor of strain: ''
GRMZM2G157329	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.19517 x 10^-2	273	105	213	280	72.22%	56.80%	378	493	RefGen V2	χ2 p-value for B73 x Mo17: '.0219517' χ2 p-value for Mo17 x B73: '3.33e-06' Biased in favor of strain: ''
GRMZM2G157329	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.151 x 10^-3	462	385	684	490	54.55%	41.74%	847	1174	RefGen V2	χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '1.50e-08' Biased in favor of strain: 'B73'
GRMZM2G157317	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.13 x 10^-14	2156	1439	1752	1335	59.97%	43.25%	3595	3087	RefGen V2	χ2 p-value for B73 x Mo17: '5.87e-33' χ2 p-value for Mo17 x B73: '6.13e-14' Biased in favor of strain: 'B73'
GRMZM2G157317	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3542	964	1912	2311	78.61%	54.72%	4506	4223	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G157316	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.74418 x 10^-1	180	103	176	185	63.60%	51.25%	283	361	RefGen V2	χ2 p-value for B73 x Mo17: '.274418' χ2 p-value for Mo17 x B73: '5.13e-10' Biased in favor of strain: ''
GRMZM2G157316	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.4 x 10^-7	274	149	296	181	64.78%	37.95%	423	477	RefGen V2	χ2 p-value for B73 x Mo17: '1.22e-09' χ2 p-value for Mo17 x B73: '1.40e-07' Biased in favor of strain: 'B73'
GRMZM2G157313	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.686686 x 10^-1	32	44	26	79	42.11%	75.24%	76	105	RefGen V2	χ2 p-value for B73 x Mo17: '.1686686' χ2 p-value for Mo17 x B73: '2.31e-07' Biased in favor of strain: ''
GRMZM2G157313	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.31734 x 10^-2	28	27	19	77	50.91%	80.21%	55	96	RefGen V2	χ2 p-value for B73 x Mo17: '.0131734' χ2 p-value for Mo17 x B73: '.0048841' Biased in favor of strain: ''
GRMZM2G157310	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.889 x 10^-4	472	171	323	418	73.41%	56.41%	643	741	RefGen V2	χ2 p-value for B73 x Mo17: '.0002889' χ2 p-value for Mo17 x B73: '3.17e-09' Biased in favor of strain: 'B73'
GRMZM2G157310	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.6453 x 10^-3	360	227	292	231	61.33%	44.17%	587	523	RefGen V2	χ2 p-value for B73 x Mo17: '4.03e-08' χ2 p-value for Mo17 x B73: '.0076453' Biased in favor of strain: 'B73'
GRMZM2G157306	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	87	87	126	88	50.00%	41.12%	174	214	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0093871' Biased in favor of strain: ''
GRMZM2G157306	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.839049 x 10^-1	31	19	18	6	62.00%	25.00%	50	24	RefGen V2	χ2 p-value for B73 x Mo17: '.4839049' χ2 p-value for Mo17 x B73: '.0000149' Biased in favor of strain: ''
GRMZM2G157300	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	0	18	0	100.00%	0.00%	9	18	RefGen V2	χ2 p-value for B73 x Mo17: '.0338955' χ2 p-value for Mo17 x B73: '1.97e-09' Biased in favor of strain: ''
GRMZM2G157300	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.828 x 10^-4	14	0	21	0	100.00%	0.00%	14	21	RefGen V2	χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '4.59e-06' Biased in favor of strain: 'B73'
GRMZM2G157296	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.53 x 10^-25	1011	541	824	451	65.14%	35.37%	1552	1275	RefGen V2	χ2 p-value for B73 x Mo17: '8.23e-33' χ2 p-value for Mo17 x B73: '1.53e-25' Biased in favor of strain: 'B73'
GRMZM2G157296	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.02 x 10^-13	2415	908	1237	1639	72.68%	56.99%	3323	2876	RefGen V2	χ2 p-value for B73 x Mo17: '2.02e-13' χ2 p-value for Mo17 x B73: '3.43e-28' Biased in favor of strain: 'B73'
GRMZM2G157267	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	5	7		58.33%	0	12	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G157267	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		10	4	3	0	71.43%	0.00%	14	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1088094' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G157263	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.29483 x 10^-2	127	67	102	72	65.46%	41.38%	194	174	RefGen V2	χ2 p-value for B73 x Mo17: '.0000165' χ2 p-value for Mo17 x B73: '.0229483' Biased in favor of strain: 'B73'
GRMZM2G157263	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.4608 x 10^-3	124	35	70	77	77.99%	52.38%	159	147	RefGen V2	χ2 p-value for B73 x Mo17: '.0024608' χ2 p-value for Mo17 x B73: '.0002386' Biased in favor of strain: 'B73'
GRMZM2G157252	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.94873 x 10^-1	8	5	13	4	61.54%	23.53%	13	17	RefGen V2	χ2 p-value for B73 x Mo17: '.694873' χ2 p-value for Mo17 x B73: '.0001613' Biased in favor of strain: ''
GRMZM2G157252	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.958 x 10^-4	148	93	183	77	61.41%	29.62%	241	260	RefGen V2	χ2 p-value for B73 x Mo17: '.0003958' χ2 p-value for Mo17 x B73: '4.90e-11' Biased in favor of strain: 'B73'
GRMZM2G157247	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.89475 x 10^-2	25	10	29	47	71.43%	61.84%	35	76	RefGen V2	χ2 p-value for B73 x Mo17: '.0112299' χ2 p-value for Mo17 x B73: '.0389475' Biased in favor of strain: ''
GRMZM2G157247	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.172992 x 10^-1	10	8	11	37	55.56%	77.08%	18	48	RefGen V2	χ2 p-value for B73 x Mo17: '.3172992' χ2 p-value for Mo17 x B73: '.1257865' Biased in favor of strain: ''
GRMZM2G157246	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.969231 x 10^-1	28	11	40	25	71.79%	38.46%	39	65	RefGen V2	χ2 p-value for B73 x Mo17: '.4969231' χ2 p-value for Mo17 x B73: '1.41e-06' Biased in favor of strain: ''
GRMZM2G157246	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.414806 x 10^-1	12	13	13	16	48.00%	55.17%	25	29	RefGen V2	χ2 p-value for B73 x Mo17: '.8414806' χ2 p-value for Mo17 x B73: '.5774686' Biased in favor of strain: ''
GRMZM2G157219	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	2	2	4	66.67%	66.67%	6	6	RefGen V2	χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: ''
GRMZM2G157219	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	1	100.00%	100.00%	2	1	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G157218	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.14111 x 10^-2	8	12	4	50	40.00%	92.59%	20	54	RefGen V2	χ2 p-value for B73 x Mo17: '.0114111' χ2 p-value for Mo17 x B73: '.0000531' Biased in favor of strain: ''
GRMZM2G157218	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.668543 x 10^-1	10	7	7	22	58.82%	75.86%	17	29	RefGen V2	χ2 p-value for B73 x Mo17: '.4668543' χ2 p-value for Mo17 x B73: '.0053457' Biased in favor of strain: ''

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