| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM5G850966 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.001848 x 10-1 | 86 | 70 | 71 | 53 | 55.13% | 42.74% | 156 | 124 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2001848' χ2 p-value for Mo17 x B73: '.1059975' Biased in favor of strain: '' |
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| GRMZM5G850966 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.297112 x 10-1 | 46 | 21 | 7 | 82 | 68.66% | 92.13% | 67 | 89 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7297112' χ2 p-value for Mo17 x B73: '3.45e-07' Biased in favor of strain: '' |
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| GRMZM5G850786 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.427639 x 10-1 | 27 | 18 | 13 | 17 | 60.00% | 56.67% | 45 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3427639' χ2 p-value for Mo17 x B73: '.245278' Biased in favor of strain: '' |
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| GRMZM5G850786 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.57518 x 10-1 | 71 | 25 | 44 | 34 | 73.96% | 43.59% | 96 | 78 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.67e-06' χ2 p-value for Mo17 x B73: '.257518' Biased in favor of strain: '' |
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| GRMZM5G850607 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.235963 x 10-1 | 404 | 312 | 244 | 262 | 56.42% | 51.78% | 716 | 506 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005856' χ2 p-value for Mo17 x B73: '.4235963' Biased in favor of strain: '' |
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| GRMZM5G850607 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.29543 x 10-2 | 379 | 159 | 313 | 501 | 70.45% | 61.55% | 538 | 814 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0629543' χ2 p-value for Mo17 x B73: '.0019482' Biased in favor of strain: '' |
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| GRMZM5G850556 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 0 | 0 | 100.00% | 9 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G850556 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G850355 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.78251 x 10-2 | 129 | 103 | 210 | 153 | 55.60% | 42.15% | 232 | 363 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0878251' χ2 p-value for Mo17 x B73: '.0027741' Biased in favor of strain: '' |
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| GRMZM5G850355 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.297112 x 10-1 | 46 | 21 | 34 | 34 | 68.66% | 50.00% | 67 | 68 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7297112' χ2 p-value for Mo17 x B73: '.0035515' Biased in favor of strain: '' |
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| GRMZM5G850129 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G850129 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.53 x 10-16 | 185 | 53 | 166 | 47 | 77.73% | 22.07% | 238 | 213 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.17e-17' χ2 p-value for Mo17 x B73: '3.53e-16' Biased in favor of strain: 'B73' |
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| GRMZM5G850092 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.21023 x 10-2 | 297 | 181 | 262 | 221 | 62.13% | 45.76% | 478 | 483 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.12e-07' χ2 p-value for Mo17 x B73: '.0621023' Biased in favor of strain: '' |
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| GRMZM5G850092 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.19833 x 10-2 | 389 | 143 | 185 | 303 | 73.12% | 62.09% | 532 | 488 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015909' χ2 p-value for Mo17 x B73: '.0319833' Biased in favor of strain: '' |
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| GRMZM5G850019 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.052982 x 10-1 | 875 | 208 | 366 | 685 | 80.79% | 65.18% | 1083 | 1051 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.06e-23' χ2 p-value for Mo17 x B73: '.3052982' Biased in favor of strain: '' |
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| GRMZM5G850019 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.33 x 10-19 | 731 | 326 | 694 | 398 | 69.16% | 36.45% | 1057 | 1092 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.28e-35' χ2 p-value for Mo17 x B73: '3.33e-19' Biased in favor of strain: 'B73' |
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| GRMZM5G849959 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 1 | 0 | 100.00% | 0.00% | 3 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G849959 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 3 | 2 | 100.00% | 40.00% | 2 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: '' |
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| GRMZM5G849788 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.861913 x 10-1 | 34 | 15 | 18 | 25 | 69.39% | 58.14% | 49 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6861913' χ2 p-value for Mo17 x B73: '.2355588' Biased in favor of strain: '' |
||||
| GRMZM5G849788 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.907458 x 10-1 | 44 | 30 | 26 | 27 | 59.46% | 50.94% | 74 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.103638' χ2 p-value for Mo17 x B73: '.8907458' Biased in favor of strain: '' |
||||
| GRMZM5G849530 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.870581 x 10-1 | 273 | 257 | 215 | 238 | 51.51% | 52.54% | 530 | 453 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4870581' χ2 p-value for Mo17 x B73: '.2798598' Biased in favor of strain: '' |
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| GRMZM5G849530 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.82 x 10-10 | 426 | 111 | 264 | 258 | 79.33% | 49.43% | 537 | 522 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.82e-10' χ2 p-value for Mo17 x B73: '6.47e-17' Biased in favor of strain: 'B73' |
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| GRMZM5G849499 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM5G849499 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 4 | 0.00% | 100.00% | 4 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM5G849243 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.36 x 10-19 | 132 | 0 | 82 | 0 | 100.00% | 0.00% | 132 | 82 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.50e-30' χ2 p-value for Mo17 x B73: '1.36e-19' Biased in favor of strain: 'B73' |
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| GRMZM5G849243 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.28 x 10-12 | 103 | 0 | 30 | 3 | 100.00% | 9.09% | 103 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.16e-13' χ2 p-value for Mo17 x B73: '2.28e-12' Biased in favor of strain: 'B73' |
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| GRMZM5G849149 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.66924 x 10-1 | 50 | 17 | 74 | 46 | 74.63% | 38.33% | 67 | 120 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.166924' χ2 p-value for Mo17 x B73: '4.58e-11' Biased in favor of strain: '' |
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| GRMZM5G849149 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.43 x 10-11 | 295 | 146 | 232 | 111 | 66.89% | 32.36% | 441 | 343 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.29e-12' χ2 p-value for Mo17 x B73: '6.43e-11' Biased in favor of strain: 'B73' |
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| GRMZM5G848945 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.547208 x 10-1 | 12 | 9 | 11 | 9 | 57.14% | 45.00% | 21 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5126908' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM5G848945 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.635445 x 10-1 | 5 | 5 | 9 | 8 | 50.00% | 47.06% | 10 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2635445' χ2 p-value for Mo17 x B73: '.0863478' Biased in favor of strain: '' |
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| GRMZM5G848838 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 12 | 7 | 50.00% | 36.84% | 2 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.0058198' Biased in favor of strain: '' |
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| GRMZM5G848838 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G848768 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1206 | 1956 | 956 | 1925 | 38.14% | 66.82% | 3162 | 2881 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'Mo17' |
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| GRMZM5G848768 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.3 x 10-11 | 2355 | 1578 | 1244 | 3112 | 59.88% | 71.44% | 3933 | 4356 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.69e-19' χ2 p-value for Mo17 x B73: '2.30e-11' Biased in favor of strain: 'Mo17' |
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| GRMZM5G848739 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.891562 x 10-1 | 39 | 13 | 18 | 32 | 75.00% | 64.00% | 52 | 50 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2024066' χ2 p-value for Mo17 x B73: '.6891562' Biased in favor of strain: '' |
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| GRMZM5G848739 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.912971 x 10-1 | 18 | 2 | 8 | 11 | 90.00% | 57.89% | 20 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003466' χ2 p-value for Mo17 x B73: '.4912971' Biased in favor of strain: '' |
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| GRMZM5G848696 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.331241 x 10-1 | 77 | 64 | 82 | 76 | 54.61% | 48.10% | 141 | 158 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2736054' χ2 p-value for Mo17 x B73: '.6331241' Biased in favor of strain: '' |
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| GRMZM5G848696 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.3237 x 10-3 | 181 | 61 | 90 | 82 | 74.79% | 47.67% | 242 | 172 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0073237' χ2 p-value for Mo17 x B73: '1.27e-07' Biased in favor of strain: 'B73' |
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| GRMZM5G848693 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 12 | 0 | 2 | 0 | 100.00% | 0.00% | 12 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143062' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM5G848693 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 12 | 2 | 4 | 2 | 85.71% | 33.33% | 14 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0075263' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: '' |
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| GRMZM5G848692 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.1 x 10-26 | 965 | 551 | 1116 | 665 | 63.65% | 37.34% | 1516 | 1781 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.10e-26' χ2 p-value for Mo17 x B73: '1.17e-26' Biased in favor of strain: 'B73' |
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| GRMZM5G848692 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.34359 x 10-2 | 315 | 121 | 198 | 292 | 72.25% | 59.59% | 436 | 490 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0134359' χ2 p-value for Mo17 x B73: '.0008932' Biased in favor of strain: '' |
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| GRMZM5G848608 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.873 x 10-4 | 870 | 343 | 539 | 594 | 71.72% | 52.43% | 1213 | 1133 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001873' χ2 p-value for Mo17 x B73: '2.77e-24' Biased in favor of strain: 'B73' |
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| GRMZM5G848608 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.57 x 10-8 | 363 | 191 | 293 | 176 | 65.52% | 37.53% | 554 | 469 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.72e-13' χ2 p-value for Mo17 x B73: '6.57e-08' Biased in favor of strain: 'B73' |
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| GRMZM5G848603 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 6 | 3 | 20 | 25.00% | 86.96% | 8 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.000393' Biased in favor of strain: '' |
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| GRMZM5G848603 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G848602 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.21554 x 10-2 | 26 | 5 | 12 | 2 | 83.87% | 14.29% | 31 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0421554' χ2 p-value for Mo17 x B73: '.0000322' Biased in favor of strain: '' |
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| GRMZM5G848602 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.57899 x 10-1 | 29 | 21 | 25 | 12 | 58.00% | 32.43% | 50 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.257899' χ2 p-value for Mo17 x B73: '.0325828' Biased in favor of strain: '' |
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| GRMZM5G848205 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 1 | 0 | 100.00% | 0.00% | 3 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G848205 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G847982 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.18 x 10-13 | 1824 | 651 | 1095 | 1588 | 73.70% | 59.19% | 2475 | 2683 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.18e-13' χ2 p-value for Mo17 x B73: '2.07e-16' Biased in favor of strain: 'B73' |
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| GRMZM5G847982 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.125 x 10-2 | 194 | 103 | 82 | 112 | 65.32% | 57.73% | 297 | 194 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.29e-07' χ2 p-value for Mo17 x B73: '.03125' Biased in favor of strain: '' |
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| GRMZM5G847707 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.03 x 10-22 | 119 | 1 | 109 | 5 | 99.17% | 4.39% | 120 | 114 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.67e-27' χ2 p-value for Mo17 x B73: '2.03e-22' Biased in favor of strain: 'B73' |
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| GRMZM5G847707 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.19 x 10-8 | 65 | 0 | 39 | 1 | 100.00% | 2.50% | 65 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.19e-08' χ2 p-value for Mo17 x B73: '7.38e-18' Biased in favor of strain: 'B73' |
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| GRMZM5G847615 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.84552 x 10-2 | 78 | 57 | 92 | 90 | 57.78% | 49.45% | 135 | 182 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0284552' χ2 p-value for Mo17 x B73: '8.35e-07' Biased in favor of strain: '' |
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| GRMZM5G847615 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.039 | 131 | 72 | 106 | 78 | 64.53% | 42.39% | 203 | 184 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000346' χ2 p-value for Mo17 x B73: '.039' Biased in favor of strain: 'B73' |
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| GRMZM5G847530 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.7144 x 10-3 | 13 | 2 | 18 | 5 | 86.67% | 21.74% | 15 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0045087' χ2 p-value for Mo17 x B73: '.0067144' Biased in favor of strain: 'B73' |
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| GRMZM5G847530 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.447117 x 10-1 | 11 | 3 | 8 | 4 | 78.57% | 33.33% | 14 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3447117' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM5G847466 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.159304 x 10-1 | 13 | 3 | 28 | 27 | 81.25% | 49.09% | 16 | 55 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2159304' χ2 p-value for Mo17 x B73: '.0056915' Biased in favor of strain: '' |
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| GRMZM5G847466 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.78517 x 10-1 | 101 | 117 | 73 | 94 | 46.33% | 56.29% | 218 | 167 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.278517' χ2 p-value for Mo17 x B73: '.1041564' Biased in favor of strain: '' |
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| GRMZM5G847230 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.962534 x 10-1 | 16 | 7 | 7 | 8 | 69.57% | 53.33% | 23 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0605689' χ2 p-value for Mo17 x B73: '.7962534' Biased in favor of strain: '' |
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| GRMZM5G847230 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.8571 x 10-3 | 78 | 16 | 25 | 23 | 82.98% | 47.92% | 94 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0007941' χ2 p-value for Mo17 x B73: '.0058571' Biased in favor of strain: 'B73' |
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| GRMZM5G847216 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 4 | 2 | 4 | 60.00% | 66.67% | 10 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.654709' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM5G847216 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.44 x 10-5 | 43 | 88 | 27 | 98 | 32.82% | 78.40% | 131 | 125 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000844' χ2 p-value for Mo17 x B73: '2.15e-10' Biased in favor of strain: 'Mo17' |
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| GRMZM5G846811 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.3 x 10-5 | 76 | 32 | 77 | 29 | 70.37% | 27.36% | 108 | 106 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000023' χ2 p-value for Mo17 x B73: '3.13e-06' Biased in favor of strain: 'B73' |
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| GRMZM5G846811 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.04 x 10-5 | 68 | 7 | 60 | 20 | 90.67% | 25.00% | 75 | 80 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000104' χ2 p-value for Mo17 x B73: '2.66e-15' Biased in favor of strain: 'B73' |
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| GRMZM5G846719 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.660906 x 10-1 | 99 | 23 | 38 | 85 | 81.15% | 69.11% | 122 | 123 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0006915' χ2 p-value for Mo17 x B73: '.5660906' Biased in favor of strain: '' |
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| GRMZM5G846719 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.39154 x 10-2 | 254 | 184 | 221 | 176 | 57.99% | 44.33% | 438 | 397 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0008236' χ2 p-value for Mo17 x B73: '.0239154' Biased in favor of strain: 'B73' |
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| GRMZM5G846548 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.467252 x 10-1 | 128 | 111 | 110 | 99 | 53.56% | 47.37% | 239 | 209 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2714896' χ2 p-value for Mo17 x B73: '.4467252' Biased in favor of strain: '' |
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| GRMZM5G846548 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.275646 x 10-1 | 76 | 34 | 36 | 67 | 69.09% | 65.05% | 110 | 103 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5896716' χ2 p-value for Mo17 x B73: '.7275646' Biased in favor of strain: '' |
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| GRMZM5G846343 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 4 | 0 | 1 | 42.86% | 100.00% | 7 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1814437' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM5G846343 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.270892 x 10-1 | 6 | 4 | 5 | 8 | 60.00% | 61.54% | 10 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.4053805' Biased in favor of strain: '' |
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| GRMZM5G846339 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.610542 x 10-1 | 78 | 64 | 63 | 51 | 54.93% | 44.74% | 142 | 114 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2400532' χ2 p-value for Mo17 x B73: '.2610542' Biased in favor of strain: '' |
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| GRMZM5G846339 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 1.85 x 10-11 | 19 | 50 | 65 | 35 | 27.54% | 35.00% | 69 | 100 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.38e-12' χ2 p-value for Mo17 x B73: '1.85e-11' Biased in favor of strain: '' |
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| GRMZM5G846235 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G846235 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.32 x 10-8 | 32 | 0 | 30 | 0 | 100.00% | 0.00% | 32 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.54e-08' χ2 p-value for Mo17 x B73: '4.32e-08' Biased in favor of strain: 'B73' |
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| GRMZM5G846198 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.51 x 10-18 | 271 | 97 | 233 | 78 | 73.64% | 25.08% | 368 | 311 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.19e-19' χ2 p-value for Mo17 x B73: '1.51e-18' Biased in favor of strain: 'B73' |
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| GRMZM5G846198 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.45 x 10-5 | 233 | 65 | 108 | 90 | 78.19% | 45.45% | 298 | 198 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000245' χ2 p-value for Mo17 x B73: '2.42e-10' Biased in favor of strain: 'B73' |
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| GRMZM5G846196 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.327677 x 10-1 | 19 | 1 | 3 | 10 | 95.00% | 76.92% | 20 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0071898' χ2 p-value for Mo17 x B73: '.4327677' Biased in favor of strain: '' |
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| GRMZM5G846196 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.79918 x 10-2 | 16 | 40 | 11 | 24 | 28.57% | 68.57% | 56 | 35 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0013406' χ2 p-value for Mo17 x B73: '.0279918' Biased in favor of strain: 'Mo17' |
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| GRMZM5G846140 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.487665 x 10-1 | 39 | 27 | 56 | 54 | 59.09% | 49.09% | 66 | 110 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1396494' χ2 p-value for Mo17 x B73: '.8487665' Biased in favor of strain: '' |
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| GRMZM5G846140 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.518449 x 10-1 | 14 | 6 | 10 | 25 | 70.00% | 71.43% | 20 | 35 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7518449' χ2 p-value for Mo17 x B73: '.5500975' Biased in favor of strain: '' |
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| GRMZM5G846097 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.229157 x 10-1 | 84 | 30 | 49 | 82 | 73.68% | 62.60% | 114 | 131 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1119716' χ2 p-value for Mo17 x B73: '.3229157' Biased in favor of strain: '' |
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| GRMZM5G846097 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.470254 x 10-1 | 262 | 165 | 244 | 213 | 61.36% | 46.61% | 427 | 457 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.68e-06' χ2 p-value for Mo17 x B73: '.1470254' Biased in favor of strain: '' |
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| GRMZM5G846071 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 3 | 0 | 100.00% | 0.00% | 6 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM5G846071 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G846057 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G846057 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 4 | 0 | 2 | 60.00% | 100.00% | 10 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM5G845782 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 1 | 0.00% | 100.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G845782 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G845775 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.680822 x 10-1 | 24 | 15 | 32 | 60 | 61.54% | 65.22% | 39 | 92 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4968857' χ2 p-value for Mo17 x B73: '.7680822' Biased in favor of strain: '' |
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| GRMZM5G845775 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.7283 x 10-1 | 25 | 23 | 40 | 34 | 52.08% | 45.95% | 48 | 74 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.77283' χ2 p-value for Mo17 x B73: '.4854988' Biased in favor of strain: '' |
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| GRMZM5G845755 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.671746 x 10-1 | 398 | 374 | 284 | 288 | 51.55% | 50.35% | 772 | 572 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3877093' χ2 p-value for Mo17 x B73: '.8671746' Biased in favor of strain: '' |
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| GRMZM5G845755 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.445091 x 10-1 | 216 | 158 | 91 | 205 | 57.75% | 69.26% | 374 | 296 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002557' χ2 p-value for Mo17 x B73: '.3445091' Biased in favor of strain: '' |
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| GRMZM5G845736 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 3 | 100.00% | 100.00% | 3 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| GRMZM5G845736 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 259 | 27 | 211 | 13 | 90.56% | 5.80% | 286 | 224 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G845682 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.367236 x 10-1 | 63 | 77 | 52 | 83 | 45.00% | 61.48% | 140 | 135 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2367236' χ2 p-value for Mo17 x B73: '.0076292' Biased in favor of strain: '' |
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| GRMZM5G845682 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.541134 x 10-1 | 31 | 24 | 21 | 49 | 56.36% | 70.00% | 55 | 70 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1050333' χ2 p-value for Mo17 x B73: '.5541134' Biased in favor of strain: '' |
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| GRMZM5G845601 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.64 x 10-13 | 397 | 87 | 320 | 294 | 82.02% | 47.88% | 484 | 614 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.64e-13' χ2 p-value for Mo17 x B73: '5.42e-23' Biased in favor of strain: 'B73' |
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| GRMZM5G845601 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.25 x 10-18 | 774 | 464 | 702 | 378 | 62.52% | 35.00% | 1238 | 1080 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.25e-18' χ2 p-value for Mo17 x B73: '6.27e-23' Biased in favor of strain: 'B73' |