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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G65910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.90926 x 10-1 165 33 54 57 83.33% 51.35% 198 111 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.087353'
Avg. expression score for this sample: '81.2946'
Avg. expression score in LCM sample: '56.2783'
Tissue used: 'pure endosperm, no chalazal'
AT5G65910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.6796 x 10-1 223 44 140 202 83.52% 59.06% 267 342 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.087353'
Avg. expression score for this sample: '131.418'
Avg. expression score in LCM sample: '56.2783'
Tissue used: 'full endosperm'
AT5G65910 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.99502 x 10-1 58 38 21 6 60.42% 22.22% 96 27 TAIR8 Avg. embryo expression (dissected): '55.4257'
Avg. embryo expression (LCM): '52.8967'
AT5G65910 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.87772 x 10-1 46 18 71.88% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65910 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2347 x 10-2 189 113 62.58% 302 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65910 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 647 28 95.85% 675 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.98805 x 10-1 1404 462 702 905 75.24% 56.32% 1866 1607 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-08'
Avg. expression score for this sample: '478.868'
Avg. expression score in LCM sample: '28.5874'
Tissue used: 'pure endosperm, no chalazal'
AT5G65900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.2 x 10-14 2457 438 980 1450 84.87% 59.67% 2895 2430 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-08'
Avg. expression score for this sample: '505.554'
Avg. expression score in LCM sample: '28.5874'
Tissue used: 'full endosperm'
AT5G65900 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.9 x 10-10 1370 818 358 279 62.61% 43.80% 2188 637 TAIR8 Avg. embryo expression (dissected): '585.506'
Avg. embryo expression (LCM): '407.827'
AT5G65900 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 x 10-8 162 135 54.55% 297 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65900 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.4 x 10-16 1688 1024 62.24% 2712 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65900 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 3496 363 90.59% 3859 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65890 ACR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.9 x 10-7 826 109 618 198 88.34% 24.26% 935 816 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002082'
Avg. expression score for this sample: '359.545'
Avg. expression score in LCM sample: '196.967'
Tissue used: 'pure endosperm, no chalazal'
AT5G65890 ACR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.95659 x 10-1 908 92 394 133 90.80% 25.24% 1000 527 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002082'
Avg. expression score for this sample: '286.792'
Avg. expression score in LCM sample: '196.967'
Tissue used: 'full endosperm'
AT5G65890 ACR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.6717 x 10-2 1034 625 524 262 62.33% 33.33% 1659 786 TAIR8 Avg. embryo expression (dissected): '907.226'
Avg. embryo expression (LCM): '248.911'
AT5G65890 ACR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 43 189 18.53% 232 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65890 ACR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 31 1128 2.67% 1159 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65890 ACR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2162 32 98.54% 2194 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.1445 x 10-2 226 52 108 180 81.29% 62.50% 278 288 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.9e-13'
Avg. expression score for this sample: '297.538'
Avg. expression score in LCM sample: '84.175'
Tissue used: 'pure endosperm, no chalazal'
AT5G65880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.2 x 10-13 714 110 229 513 86.65% 69.14% 824 742 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.9e-13'
Avg. expression score for this sample: '597.412'
Avg. expression score in LCM sample: '84.175'
Tissue used: 'full endosperm'
AT5G65880 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.46974 x 10-1 278 161 134 70 63.33% 34.31% 439 204 TAIR8 Avg. embryo expression (dissected): '578.127'
Avg. embryo expression (LCM): '702.615'
AT5G65880 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.0 x 10-15 168 141 54.37% 309 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65880 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.62 x 10-4 628 261 70.64% 889 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65880 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1802 62 96.67% 1864 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65870 PSK5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.02941 x 10-1 0 0 0 9 100.00% 0 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.6e-19'
Avg. expression score for this sample: '1.95467'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G65870 PSK5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.5 x 10-18 13 0 2 159 100.00% 98.76% 13 161 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.6e-19'
Avg. expression score for this sample: '34.0414'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G65870 PSK5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G65870 PSK5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 82 0 100.00% 82 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65870 PSK5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 110 1 99.10% 111 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65870 PSK5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 26 0 100.00% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 31 16 10 20 65.96% 66.67% 47 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.057794'
Avg. expression score for this sample: '54.1858'
Avg. expression score in LCM sample: '25.3245'
Tissue used: 'pure endosperm, no chalazal'
AT5G65860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0978 x 10-2 58 14 14 56 80.56% 80.00% 72 70 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.057794'
Avg. expression score for this sample: '67.8356'
Avg. expression score in LCM sample: '25.3245'
Tissue used: 'full endosperm'
AT5G65860 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.97899 x 10-1 48 52 12 10 48.00% 45.45% 100 22 TAIR8 Avg. embryo expression (dissected): '129.717'
Avg. embryo expression (LCM): '386.88'
AT5G65860 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.39905 x 10-1 14 9 60.87% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65860 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.55041 x 10-1 25 6 80.65% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65860 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.1696 x 10-2 92 18 83.64% 110 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 1 0 100.00% 0.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.484078'
Avg. expression score for this sample: '24.4335'
Avg. expression score in LCM sample: '35.1574'
Tissue used: 'pure endosperm, no chalazal'
AT5G65850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.38433 x 10-1 13 0 3 1 100.00% 25.00% 13 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.484078'
Avg. expression score for this sample: '20.9869'
Avg. expression score in LCM sample: '35.1574'
Tissue used: 'full endosperm'
AT5G65850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 2 0 0 50.00% 4 0 TAIR8 Avg. embryo expression (dissected): '15.796'
Avg. embryo expression (LCM): '21.3245'
AT5G65850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.7292 x 10-2 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0872 x 10-2 8 13 38.10% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.811 x 10-3 77 1 98.72% 78 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.07598 x 10-1 22 17 15 24 56.41% 61.54% 39 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.012765'
Avg. expression score for this sample: '306.069'
Avg. expression score in LCM sample: '167.218'
Tissue used: 'pure endosperm, no chalazal'
AT5G65840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.276 x 10-3 145 98 124 468 59.67% 79.05% 243 592 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.012765'
Avg. expression score for this sample: '482.67'
Avg. expression score in LCM sample: '167.218'
Tissue used: 'full endosperm'
AT5G65840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 14 17 4 6 45.16% 60.00% 31 10 TAIR8 Avg. embryo expression (dissected): '240.499'
Avg. embryo expression (LCM): '130.446'
AT5G65840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.35992 x 10-1 32 6 84.21% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 x 10-12 503 72 87.48% 575 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.31425 x 10-1 252 86 74.56% 338 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65830 RLP57 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.45345 x 10-1 69 50 60 166 57.98% 73.45% 119 226 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.872689'
Avg. expression score for this sample: '171.286'
Avg. expression score in LCM sample: '67.0813'
Tissue used: 'pure endosperm, no chalazal'
AT5G65830 RLP57 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 133 83 67 163 61.57% 70.87% 216 230 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.872689'
Avg. expression score for this sample: '181.596'
Avg. expression score in LCM sample: '67.0813'
Tissue used: 'full endosperm'
AT5G65830 RLP57 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.70474 x 10-1 32 43 7 12 42.67% 63.16% 75 19 TAIR8 Avg. embryo expression (dissected): '72.3914'
Avg. embryo expression (LCM): '57.3173'
AT5G65830 RLP57 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.5076 x 10-2 58 15 79.45% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65830 RLP57 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.00091 x 10-1 12 4 75.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65830 RLP57 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.349 x 10-3 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 126 78 90 207 61.76% 69.70% 204 297 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.932882'
Avg. expression score for this sample: '346.753'
Avg. expression score in LCM sample: '133.692'
Tissue used: 'pure endosperm, no chalazal'
AT5G65820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.5681 x 10-1 242 153 104 267 61.27% 71.97% 395 371 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.932882'
Avg. expression score for this sample: '448.8'
Avg. expression score in LCM sample: '133.692'
Tissue used: 'full endosperm'
AT5G65820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.0101 x 10-1 167 170 86 94 49.55% 52.22% 337 180 TAIR8 Avg. embryo expression (dissected): '507.242'
Avg. embryo expression (LCM): '211.386'
AT5G65820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.86028 x 10-1 39 18 68.42% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.41143 x 10-1 162 83 66.12% 245 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.527 x 10-3 201 68 74.72% 269 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65810 CGR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.0955 x 10-2 79 25 27 90 75.96% 76.92% 104 117 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.1e-06'
Avg. expression score for this sample: '128.502'
Avg. expression score in LCM sample: '14.4774'
Tissue used: 'pure endosperm, no chalazal'
AT5G65810 CGR3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.0 x 10-5 138 36 32 142 79.31% 81.61% 174 174 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.1e-06'
Avg. expression score for this sample: '180.438'
Avg. expression score in LCM sample: '14.4774'
Tissue used: 'full endosperm'
AT5G65810 CGR3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.22163 x 10-1 70 61 20 24 53.44% 54.55% 131 44 TAIR8 Avg. embryo expression (dissected): '182.508'
Avg. embryo expression (LCM): '93.3228'
AT5G65810 CGR3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.89 x 10-4 56 2 96.55% 58 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65810 CGR3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.5 x 10-13 206 5 97.63% 211 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65810 CGR3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5 x 10-13 353 17 95.41% 370 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65800 ACS5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G65800 ACS5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G65800 ACS5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G65800 ACS5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65800 ACS5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65800 ACS5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65790 MYB68 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.16101'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G65790 MYB68 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '29.1423'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G65790 MYB68 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '8.01232'
Avg. embryo expression (LCM): '5.37507'
AT5G65790 MYB68 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65790 MYB68 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65790 MYB68 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65780 ATBCAT-5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.04916 x 10-1 24 1 7 6 96.00% 46.15% 25 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.221247'
Avg. expression score for this sample: '65.5678'
Avg. expression score in LCM sample: '60.673'
Tissue used: 'pure endosperm, no chalazal'
AT5G65780 ATBCAT-5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.83943 x 10-1 59 5 29 26 92.19% 47.27% 64 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.221247'
Avg. expression score for this sample: '108.814'
Avg. expression score in LCM sample: '60.673'
Tissue used: 'full endosperm'
AT5G65780 ATBCAT-5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.61998 x 10-1 24 8 10 0 75.00% 0.00% 32 10 TAIR8 Avg. embryo expression (dissected): '78.9052'
Avg. embryo expression (LCM): '117.259'
AT5G65780 ATBCAT-5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.381 x 10-2 2 4 33.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65780 ATBCAT-5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.01 x 10-4 11 19 36.67% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65780 ATBCAT-5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5 x 10-4 51 2 96.23% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65770 LINC4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.38332 x 10-1 359 145 162 306 71.23% 65.38% 504 468 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.0e-08'
Avg. expression score for this sample: '705.475'
Avg. expression score in LCM sample: '172.759'
Tissue used: 'pure endosperm, no chalazal'
AT5G65770 LINC4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.7 x 10-10 787 227 453 1197 77.61% 72.55% 1014 1650 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.0e-08'
Avg. expression score for this sample: '1136.93'
Avg. expression score in LCM sample: '172.759'
Tissue used: 'full endosperm'
AT5G65770 LINC4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.4893 x 10-2 258 194 60 65 57.08% 52.00% 452 125 TAIR8 Avg. embryo expression (dissected): '741.314'
Avg. embryo expression (LCM): '607.446'
AT5G65770 LINC4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.24061 x 10-1 102 34 75.00% 136 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65770 LINC4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1111 x 10-2 917 280 76.61% 1197 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65770 LINC4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1226 133 90.21% 1359 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 2 2 100.00% 50.00% 3 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.205483'
Avg. expression score for this sample: '26.0036'
Avg. expression score in LCM sample: '10.3326'
Tissue used: 'pure endosperm, no chalazal'
AT5G65760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.24503 x 10-1 7 0 2 8 100.00% 80.00% 7 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.205483'
Avg. expression score for this sample: '32.3194'
Avg. expression score in LCM sample: '10.3326'
Tissue used: 'full endosperm'
AT5G65760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.80172 x 10-1 6 3 1 1 66.67% 50.00% 9 2 TAIR8 Avg. embryo expression (dissected): '39.9452'
Avg. embryo expression (LCM): '22.0529'
AT5G65760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.419 x 10-3 0 4 0.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.52359 x 10-1 8 3 72.73% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.89463 x 10-1 24 1 96.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G65750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.3 x 10-7 836 380 322 1068 68.75% 76.83% 1216 1390 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '269.11'
Avg. expression score in LCM sample: '98.8288'
Tissue used: 'pure endosperm, no chalazal'
AT5G65750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 2050 649 694 2480 75.95% 78.13% 2699 3174 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '435.559'
Avg. expression score in LCM sample: '98.8288'
Tissue used: 'full endosperm'
AT5G65750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.23631 x 10-1 613 584 215 215 51.21% 50.00% 1197 430 TAIR8 Avg. embryo expression (dissected): '281.025'
Avg. embryo expression (LCM): '157.66'
AT5G65750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.34901 x 10-1 690 217 76.07% 907 TAIR8 Mutant effect: 'N/A (not a MEG)'