| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G73980 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.56026 x 10-1 | 84 | 41 | 67.20% | 125 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73980 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.54256 x 10-1 | 29 | 12 | 70.73% | 41 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73980 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.32816 x 10-1 | 21 | 13 | 15 | 26 | 61.76% | 63.41% | 34 | 41 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.08554' Avg. expression score for this sample: '102.224' Avg. expression score in LCM sample: '38.7731' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73980 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.499 x 10-3 | 159 | 31 | 83.68% | 190 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73970 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.258 x 10-3 | 30 | 5 | 85.71% | 35 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73970 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.8 x 10-5 | 42 | 3 | 93.33% | 45 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73970 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.46965 x 10-1 | 6 | 3 | 1 | 2 | 66.67% | 66.67% | 9 | 3 | TAIR8 |
Avg. embryo expression (dissected): '96.3936' Avg. embryo expression (LCM): '87.7468' |
||||
| AT1G73970 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.2991 x 10-1 | 12 | 9 | 11 | 17 | 57.14% | 60.71% | 21 | 28 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.387517' Avg. expression score for this sample: '153.09' Avg. expression score in LCM sample: '70.1825' Tissue used: 'full endosperm' |
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| AT1G73970 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.36507 x 10-1 | 4 | 5 | 5 | 8 | 44.44% | 61.54% | 9 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.387517' Avg. expression score for this sample: '101.885' Avg. expression score in LCM sample: '70.1825' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G73970 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.33417 x 10-1 | 6 | 1 | 85.71% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73965 | CLE13 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73965 | CLE13 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.54684' Avg. expression score in LCM sample: '2.18999' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT1G73965 | CLE13 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73965 | CLE13 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.01686' Avg. expression score in LCM sample: '2.18999' Tissue used: 'full endosperm' |
||||||
| AT1G73965 | CLE13 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.54211' Avg. embryo expression (LCM): '1.87123' |
|||||
| AT1G73965 | CLE13 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73960 | TAF2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.1 x 10-6 | 153 | 23 | 86.93% | 176 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G73960 | TAF2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.7568 x 10-2 | 38 | 26 | 8 | 24 | 59.38% | 75.00% | 64 | 32 | TAIR8 |
Avg. embryo expression (dissected): '153.75' Avg. embryo expression (LCM): '110.679' |
|||
| AT1G73960 | TAF2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.06054 x 10-1 | 97 | 44 | 50 | 138 | 68.79% | 73.40% | 141 | 188 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.356677' Avg. expression score for this sample: '157.188' Avg. expression score in LCM sample: '66.1406' Tissue used: 'full endosperm' |
||||
| AT1G73960 | TAF2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.95568 x 10-1 | 39 | 22 | 23 | 45 | 63.93% | 66.18% | 61 | 68 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.356677' Avg. expression score for this sample: '135.313' Avg. expression score in LCM sample: '66.1406' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G73960 | TAF2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.47526 x 10-1 | 15 | 8 | 65.22% | 23 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G73960 | TAF2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.1 x 10-7 | 162 | 22 | 88.04% | 184 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G73950 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.0 x 10-6 | 92 | 7 | 92.93% | 99 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73950 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.24316 x 10-1 | 25 | 17 | 8 | 43 | 59.52% | 84.31% | 42 | 51 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.699081' Avg. expression score for this sample: '49.2947' Avg. expression score in LCM sample: '11.3615' Tissue used: 'full endosperm' |
|||||
| AT1G73950 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.57862 x 10-1 | 5 | 10 | 2 | 4 | 33.33% | 66.67% | 15 | 6 | TAIR8 |
Avg. embryo expression (dissected): '28.0423' Avg. embryo expression (LCM): '15.9494' |
||||
| AT1G73950 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 9.3 x 10-5 | 76 | 7 | 91.57% | 83 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73950 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.1497 x 10-2 | 15 | 1 | 93.75% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73950 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.53677 x 10-1 | 10 | 8 | 9 | 16 | 55.56% | 64.00% | 18 | 25 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.699081' Avg. expression score for this sample: '29.6896' Avg. expression score in LCM sample: '11.3615' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73940 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '250.696' Avg. expression score in LCM sample: '208.255' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G73940 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G73940 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G73940 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G73940 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '756.897' Avg. embryo expression (LCM): '1295.22' |
||||||
| AT1G73940 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '596.42' Avg. expression score in LCM sample: '208.255' Tissue used: 'full endosperm' |
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| AT1G73930 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 90 | 45 | 56 | 114 | 66.67% | 67.06% | 135 | 170 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.546277' Avg. expression score for this sample: '271.55' Avg. expression score in LCM sample: '169.923' Tissue used: 'full endosperm' |
|||||
| AT1G73930 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.38904 x 10-1 | 45 | 24 | 14 | 10 | 65.22% | 41.67% | 69 | 24 | TAIR8 |
Avg. embryo expression (dissected): '272.011' Avg. embryo expression (LCM): '173.346' |
||||
| AT1G73930 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.84917 x 10-1 | 233 | 83 | 73.73% | 316 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73930 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 31 | 14 | 68.89% | 45 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73930 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.08099 x 10-1 | 52 | 4 | 20 | 22 | 92.86% | 52.38% | 56 | 42 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.546277' Avg. expression score for this sample: '187.104' Avg. expression score in LCM sample: '169.923' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73930 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.1 x 10-12 | 308 | 34 | 90.06% | 342 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73920 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.04 x 10-4 | 101 | 5 | 95.28% | 106 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73920 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.08561 x 10-1 | 44 | 6 | 88.00% | 50 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73920 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 28 | 32 | 3 | 5 | 46.67% | 62.50% | 60 | 8 | TAIR8 |
Avg. embryo expression (dissected): '243.057' Avg. embryo expression (LCM): '85.5993' |
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| AT1G73920 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.645 x 10-3 | 25 | 7 | 8 | 57 | 78.12% | 87.69% | 32 | 65 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.022338' Avg. expression score for this sample: '152.804' Avg. expression score in LCM sample: '20.5918' Tissue used: 'full endosperm' |
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| AT1G73920 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 20 | 11 | 3 | 11 | 64.52% | 78.57% | 31 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.022338' Avg. expression score for this sample: '117.265' Avg. expression score in LCM sample: '20.5918' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73920 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.5822 x 10-2 | 20 | 0 | 100.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73910 | ARP4A | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73910 | ARP4A | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.323077' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT1G73910 | ARP4A | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73910 | ARP4A | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.23077 x 10-1 | 6 | 0 | 1 | 1 | 100.00% | 50.00% | 6 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.323077' Avg. expression score for this sample: '6.20398' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G73910 | ARP4A | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.34098' Avg. embryo expression (LCM): '5.80206' |
|||||
| AT1G73910 | ARP4A | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73900 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G73900 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT1G73900 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G73900 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G73900 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G73900 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G73890 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.5492 x 10-2 | 21 | 3 | 87.50% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73890 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.43931 x 10-1 | 44 | 7 | 9 | 13 | 86.27% | 59.09% | 51 | 22 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '66.6702' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT1G73890 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.51851 x 10-1 | 72 | 50 | 16 | 15 | 59.02% | 48.39% | 122 | 31 | TAIR8 |
Avg. embryo expression (dissected): '275.385' Avg. embryo expression (LCM): '62.9059' |
||||
| AT1G73890 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.9007 x 10-2 | 12 | 0 | 100.00% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73890 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 1 | 66.67% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73890 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.8183 x 10-1 | 42 | 16 | 22 | 10 | 72.41% | 31.25% | 58 | 32 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '96.6723' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G73885 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 9.12092 x 10-1 | 100 | 39 | 21 | 26 | 71.94% | 55.32% | 139 | 47 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.939385' Avg. expression score for this sample: '94.4416' Avg. expression score in LCM sample: '33.232' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G73885 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.695 x 10-3 | 5 | 12 | 29.41% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73885 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.253 x 10-3 | 42 | 5 | 89.36% | 47 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73885 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.89502 x 10-1 | 47 | 15 | 75.81% | 62 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73885 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.04639 x 10-1 | 158 | 143 | 25 | 22 | 52.49% | 46.81% | 301 | 47 | TAIR8 |
Avg. embryo expression (dissected): '251.174' Avg. embryo expression (LCM): '133.234' |
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| AT1G73885 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 94 | 32 | 36 | 43 | 74.60% | 54.43% | 126 | 79 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.939385' Avg. expression score for this sample: '76.7258' Avg. expression score in LCM sample: '33.232' Tissue used: 'full endosperm' |
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| AT1G73880 | UGT89B1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.1677 x 10-2 | 158 | 17 | 74 | 110 | 90.29% | 59.78% | 175 | 184 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.005483' Avg. expression score for this sample: '67.9694' Avg. expression score in LCM sample: '12.9048' Tissue used: 'full endosperm' |
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| AT1G73880 | UGT89B1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.29 x 10-4 | 171 | 73 | 29 | 24 | 70.08% | 45.28% | 244 | 53 | TAIR8 |
Avg. embryo expression (dissected): '72.0901' Avg. embryo expression (LCM): '38.5799' |
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| AT1G73880 | UGT89B1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.6235 x 10-2 | 112 | 59 | 65.50% | 171 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G73880 | UGT89B1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.26412 x 10-1 | 36 | 15 | 70.59% | 51 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G73880 | UGT89B1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.2084 x 10-1 | 157 | 37 | 61 | 99 | 80.93% | 61.88% | 194 | 160 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.005483' Avg. expression score for this sample: '73.543' Avg. expression score in LCM sample: '12.9048' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73880 | UGT89B1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.598 x 10-3 | 171 | 36 | 82.61% | 207 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G73875 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.67325 x 10-1 | 17 | 7 | 70.83% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73875 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 15 | 9 | 62.50% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73875 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.37186 x 10-1 | 6 | 2 | 1 | 0 | 75.00% | 0.00% | 8 | 1 | TAIR8 |
Avg. embryo expression (dissected): '39.8881' Avg. embryo expression (LCM): '29.2113' |
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| AT1G73875 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 5 | 5 | 2 | 9 | 50.00% | 81.82% | 10 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.78917' Avg. expression score for this sample: '14.9398' Avg. expression score in LCM sample: '9.75942' Tissue used: 'full endosperm' |
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| AT1G73875 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.37186 x 10-1 | 2 | 4 | 1 | 2 | 33.33% | 66.67% | 6 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.78917' Avg. expression score for this sample: '25.4535' Avg. expression score in LCM sample: '9.75942' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73875 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73870 | BBX16 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73870 | BBX16 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.8033 x 10-2 | 58 | 6 | 9 | 1 | 90.62% | 10.00% | 64 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.006384' Avg. expression score for this sample: '24.223' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73870 | BBX16 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.6 x 10-6 | 93 | 0 | 100.00% | 93 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G73870 | BBX16 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.8505 x 10-2 | 56 | 1 | 10 | 1 | 98.25% | 9.09% | 57 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.006384' Avg. expression score for this sample: '20.3397' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G73870 | BBX16 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.29287 x 10-1 | 35 | 24 | 12 | 10 | 59.32% | 45.45% | 59 | 22 | TAIR8 |
Avg. embryo expression (dissected): '40.3954' Avg. embryo expression (LCM): '22.7687' |
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| AT1G73870 | BBX16 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73860 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.375 | 20 | 0 | 100.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73860 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 2 | 0 | 0 | 0.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '3.9472' Avg. embryo expression (LCM): '2.54939' |
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| AT1G73860 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 1 | 0 | 2 | 0.00% | 100.00% | 1 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.31677' Avg. expression score for this sample: '2.93437' Avg. expression score in LCM sample: '.42624' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G73860 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G73860 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.35294 x 10-1 | 39 | 0 | 100.00% | 39 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73860 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.02941 x 10-1 | 2 | 0 | 0 | 7 | 100.00% | 100.00% | 2 | 7 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.31677' Avg. expression score for this sample: '4.29098' Avg. expression score in LCM sample: '.42624' Tissue used: 'full endosperm' |
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| AT1G73850 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 0 | 0 | 2 | 100.00% | 100.00% | 2 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.444444' Avg. expression score for this sample: '13.2132' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G73850 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 16 | 0 | 100.00% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73850 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 1 | 0 | 1 | 50.00% | 100.00% | 2 | 1 | TAIR8 |
Avg. embryo expression (dissected): '11.1395' Avg. embryo expression (LCM): '1.394' |
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| AT1G73850 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73850 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.66667 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G73850 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.444444' Avg. expression score for this sample: '1.42987' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |