| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G74448 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 2 | 0 | 0 | 33.33% | 3 | 0 | TAIR8 |
Avg. embryo expression (dissected): '5.84539' Avg. embryo expression (LCM): '0' |
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| AT1G74448 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G74448 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G74448 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G74440 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.5868 x 10-1 | 7 | 2 | 77.78% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74440 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.782 x 10-2 | 85 | 38 | 19 | 8 | 69.11% | 29.63% | 123 | 27 | TAIR8 |
Avg. embryo expression (dissected): '80.1757' Avg. embryo expression (LCM): '64.2874' |
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| AT1G74440 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.108 x 10-3 | 45 | 9 | 10 | 62 | 83.33% | 86.11% | 54 | 72 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '8.3e-06' Avg. expression score for this sample: '70.0847' Avg. expression score in LCM sample: '3.35112' Tissue used: 'full endosperm' |
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| AT1G74440 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.095 x 10-3 | 30 | 3 | 3 | 25 | 90.91% | 89.29% | 33 | 28 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '8.3e-06' Avg. expression score for this sample: '38.3911' Avg. expression score in LCM sample: '3.35112' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G74440 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.1 x 10-5 | 105 | 0 | 100.00% | 105 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74440 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.2296 x 10-2 | 54 | 1 | 98.18% | 55 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74430 | MYB95 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.99372 x 10-1 | 11 | 0 | 100.00% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G74430 | MYB95 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.0 x 10-5 | 65 | 0 | 100.00% | 65 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G74430 | MYB95 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 1 | 75.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G74430 | MYB95 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.2609 x 10-2 | 16 | 0 | 1 | 7 | 100.00% | 87.50% | 16 | 8 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.048266' Avg. expression score for this sample: '11.2915' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G74430 | MYB95 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.36 x 10-4 | 83 | 30 | 3 | 7 | 73.45% | 70.00% | 113 | 10 | TAIR8 |
Avg. embryo expression (dissected): '74.9137' Avg. embryo expression (LCM): '46.3035' |
|||
| AT1G74430 | MYB95 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.27646 x 10-1 | 14 | 8 | 6 | 26 | 63.64% | 81.25% | 22 | 32 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.048266' Avg. expression score for this sample: '14.9019' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G74420 | FUT3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.0294 x 10-2 | 17 | 6 | 0 | 18 | 73.91% | 100.00% | 23 | 18 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.034426' Avg. expression score for this sample: '48.3383' Avg. expression score in LCM sample: '12.4197' Tissue used: 'full endosperm' |
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| AT1G74420 | FUT3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 4 | 0 | 1 | 1 | 100.00% | 50.00% | 4 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.034426' Avg. expression score for this sample: '32.7596' Avg. expression score in LCM sample: '12.4197' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G74420 | FUT3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 4 | 4 | 1 | 3 | 50.00% | 75.00% | 8 | 4 | TAIR8 |
Avg. embryo expression (dissected): '214.373' Avg. embryo expression (LCM): '114.71' |
|||
| AT1G74420 | FUT3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.3954 x 10-2 | 40 | 0 | 100.00% | 40 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G74420 | FUT3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.11437 x 10-1 | 18 | 5 | 78.26% | 23 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G74420 | FUT3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G74410 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74410 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '80.3416' Avg. embryo expression (LCM): '41.707' |
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| AT1G74410 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.54545 x 10-1 | 4 | 0 | 0 | 2 | 100.00% | 100.00% | 4 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.582043' Avg. expression score for this sample: '471.308' Avg. expression score in LCM sample: '109.823' Tissue used: 'full endosperm' |
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| AT1G74410 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 1 | 0 | 1 | 66.67% | 100.00% | 3 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.582043' Avg. expression score for this sample: '374.724' Avg. expression score in LCM sample: '109.823' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G74410 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.93985 x 10-1 | 9 | 3 | 75.00% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74410 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.54545 x 10-1 | 12 | 0 | 100.00% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74400 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 1 | 75.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74400 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74400 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74400 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 0 | 1 | 0 | 100.00% | 0.00% | 3 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.216124' Avg. expression score for this sample: '17.0901' Avg. expression score in LCM sample: '2.1165' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G74400 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '16.6046' Avg. embryo expression (LCM): '17.1927' |
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| AT1G74400 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.94157 x 10-1 | 22 | 6 | 1 | 10 | 78.57% | 90.91% | 28 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.216124' Avg. expression score for this sample: '66.8328' Avg. expression score in LCM sample: '2.1165' Tissue used: 'full endosperm' |
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| AT1G74390 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.39468 x 10-1 | 31 | 7 | 8 | 11 | 81.58% | 57.89% | 38 | 19 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.250066' Avg. expression score for this sample: '53.8604' Avg. expression score in LCM sample: '3.33643' Tissue used: 'full endosperm' |
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| AT1G74390 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.6749 x 10-1 | 17 | 3 | 4 | 6 | 85.00% | 60.00% | 20 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.250066' Avg. expression score for this sample: '21.2766' Avg. expression score in LCM sample: '3.33643' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G74390 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.0125 x 10-2 | 27 | 6 | 3 | 1 | 81.82% | 25.00% | 33 | 4 | TAIR8 |
Avg. embryo expression (dissected): '37.6529' Avg. embryo expression (LCM): '20.7091' |
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| AT1G74390 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 16 | 5 | 76.19% | 21 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74390 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.1 x 10-6 | 75 | 1 | 98.68% | 76 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74390 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.06 x 10-4 | 3 | 11 | 21.43% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74380 | XXT5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.924 x 10-3 | 258 | 59 | 81.39% | 317 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G74380 | XXT5 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 9.824 x 10-3 | 58 | 157 | 11 | 48 | 26.98% | 81.36% | 215 | 59 | TAIR8 |
Avg. embryo expression (dissected): '631.819' Avg. embryo expression (LCM): '294.549' |
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| AT1G74380 | XXT5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.8 x 10-15 | 417 | 376 | 226 | 1551 | 52.59% | 87.28% | 793 | 1777 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.3e-13' Avg. expression score for this sample: '1430.31' Avg. expression score in LCM sample: '309.465' Tissue used: 'full endosperm' |
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| AT1G74380 | XXT5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.40988 x 10-1 | 188 | 216 | 55 | 425 | 46.53% | 88.54% | 404 | 480 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.3e-13' Avg. expression score for this sample: '1189.52' Avg. expression score in LCM sample: '309.465' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G74380 | XXT5 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.9 x 10-17 | 812 | 118 | 87.31% | 930 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G74380 | XXT5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 1314 | 94 | 93.32% | 1408 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G74370 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G74370 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74370 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G74370 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '177.154' Avg. expression score in LCM sample: '24.8689' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G74370 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 0 | 1 | 0 | 1 | 0.00% | 100.00% | 1 | 1 | TAIR8 |
Avg. embryo expression (dissected): '218.11' Avg. embryo expression (LCM): '125.247' |
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| AT1G74370 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '112.217' Avg. expression score in LCM sample: '24.8689' Tissue used: 'full endosperm' |
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| AT1G74360 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 5 | 6 | 0 | 5 | 45.45% | 100.00% | 11 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '7.03049' Avg. expression score in LCM sample: '1.63147' Tissue used: 'full endosperm' |
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| AT1G74360 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 0 | 2 | 2 | 100.00% | 50.00% | 3 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '2.9455' Avg. expression score in LCM sample: '1.63147' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G74360 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.44851 x 10-1 | 3 | 1 | 2 | 6 | 75.00% | 75.00% | 4 | 8 | TAIR8 |
Avg. embryo expression (dissected): '9.82479' Avg. embryo expression (LCM): '1.74564' |
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| AT1G74360 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0002 | 78 | 3 | 96.30% | 81 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74360 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.9321 x 10-1 | 6 | 1 | 85.71% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74360 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 1 | 75.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74350 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74350 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.57862 x 10-1 | 9 | 10 | 2 | 0 | 47.37% | 0.00% | 19 | 2 | TAIR8 |
Avg. embryo expression (dissected): '11.0297' Avg. embryo expression (LCM): '10.5492' |
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| AT1G74350 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 17 | 6 | 5 | 9 | 73.91% | 64.29% | 23 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '10.1959' Avg. expression score in LCM sample: '6.49648' Tissue used: 'full endosperm' |
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| AT1G74350 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.15987 x 10-1 | 4 | 3 | 4 | 5 | 57.14% | 55.56% | 7 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '6.74894' Avg. expression score in LCM sample: '6.49648' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G74350 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.36563 x 10-1 | 64 | 22 | 74.42% | 86 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74350 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 55 | 27 | 67.07% | 82 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74340 | DPMS2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G74340 | DPMS2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 1 | 66.67% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G74340 | DPMS2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74340 | DPMS2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '48.9393' Avg. expression score in LCM sample: '27.7938' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G74340 | DPMS2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '86.2513' Avg. embryo expression (LCM): '32.6523' |
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| AT1G74340 | DPMS2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '67.7003' Avg. expression score in LCM sample: '27.7938' Tissue used: 'full endosperm' |
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| AT1G74330 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.8597 x 10-1 | 92 | 25 | 48 | 100 | 78.63% | 67.57% | 117 | 148 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.074988' Avg. expression score for this sample: '57.5911' Avg. expression score in LCM sample: '42.1683' Tissue used: 'full endosperm' |
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| AT1G74330 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.78551 x 10-1 | 73 | 32 | 24 | 71 | 69.52% | 74.74% | 105 | 95 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.074988' Avg. expression score for this sample: '65.7426' Avg. expression score in LCM sample: '42.1683' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G74330 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.57582 x 10-1 | 30 | 31 | 13 | 9 | 49.18% | 40.91% | 61 | 22 | TAIR8 |
Avg. embryo expression (dissected): '38.2644' Avg. embryo expression (LCM): '27.6289' |
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| AT1G74330 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.274 x 10-3 | 80 | 58 | 57.97% | 138 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74330 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.2 x 10-5 | 242 | 44 | 84.62% | 286 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74330 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.51907 x 10-1 | 21 | 4 | 84.00% | 25 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74320 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.14664 x 10-1 | 14 | 7 | 66.67% | 21 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74320 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.5581 x 10-2 | 39 | 9 | 12 | 7 | 81.25% | 36.84% | 48 | 19 | TAIR8 |
Avg. embryo expression (dissected): '172.573' Avg. embryo expression (LCM): '39.0195' |
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| AT1G74320 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.5148 x 10-2 | 96 | 15 | 36 | 56 | 86.49% | 60.87% | 111 | 92 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.144837' Avg. expression score for this sample: '94.6342' Avg. expression score in LCM sample: '28.8961' Tissue used: 'full endosperm' |
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| AT1G74320 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 38 | 7 | 20 | 17 | 84.44% | 45.95% | 45 | 37 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.144837' Avg. expression score for this sample: '117.005' Avg. expression score in LCM sample: '28.8961' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G74320 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.9 x 10-11 | 157 | 6 | 96.32% | 163 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74320 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.77132 x 10-1 | 24 | 5 | 82.76% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74310 | HSP101 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 1950 | 318 | 85.98% | 2268 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G74310 | HSP101 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 9326 | 493 | 94.98% | 9819 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G74310 | HSP101 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 6399 | 1501 | 81.00% | 7900 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G74310 | HSP101 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 12610 | 4552 | 6473 | 14649 | 73.48% | 69.35% | 17162 | 21122 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '13579' Avg. expression score in LCM sample: '105.149' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G74310 | HSP101 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.77 x 10-4 | 5360 | 4502 | 2706 | 2432 | 54.35% | 47.33% | 9862 | 5138 | TAIR8 |
Avg. embryo expression (dissected): '10222.2' Avg. embryo expression (LCM): '66.7865' |
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| AT1G74310 | HSP101 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 0.0 | 17115 | 4990 | 4927 | 18861 | 77.43% | 79.29% | 22105 | 23788 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '9617.68' Avg. expression score in LCM sample: '105.149' Tissue used: 'full endosperm' |
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| AT1G74300 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.6339 x 10-1 | 243 | 70 | 100 | 166 | 77.64% | 62.41% | 313 | 266 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.276476' Avg. expression score for this sample: '351.465' Avg. expression score in LCM sample: '4.73273' Tissue used: 'full endosperm' |
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| AT1G74300 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.4156 x 10-1 | 26 | 10 | 11 | 5 | 72.22% | 31.25% | 36 | 16 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.276476' Avg. expression score for this sample: '108.357' Avg. expression score in LCM sample: '4.73273' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G74300 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.73246 x 10-1 | 22 | 14 | 6 | 3 | 61.11% | 33.33% | 36 | 9 | TAIR8 |
Avg. embryo expression (dissected): '215.721' Avg. embryo expression (LCM): '47.484' |
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| AT1G74300 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.7 x 10-9 | 93 | 5 | 94.90% | 98 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74300 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.20827 x 10-1 | 11 | 1 | 91.67% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74300 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.79319 x 10-1 | 33 | 20 | 62.26% | 53 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74290 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.36765 x 10-1 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74290 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.08392 x 10-1 | 2 | 5 | 0 | 0 | 28.57% | 7 | 0 | TAIR8 |
Avg. embryo expression (dissected): '5.73861' Avg. embryo expression (LCM): '1.13027' |
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| AT1G74290 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.33718 x 10-1 | 8 | 4 | 1 | 8 | 66.67% | 88.89% | 12 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.791071' Avg. expression score for this sample: '33.8302' Avg. expression score in LCM sample: '5.27655' Tissue used: 'full endosperm' |
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| AT1G74290 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.78895 x 10-1 | 0 | 7 | 0 | 3 | 0.00% | 100.00% | 7 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.791071' Avg. expression score for this sample: '12.2947' Avg. expression score in LCM sample: '5.27655' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G74290 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.22727 x 10-1 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G74290 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |