| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G75230 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.93027 x 10-1 | 6 | 1 | 1 | 3 | 85.71% | 75.00% | 7 | 4 | TAIR8 |
Avg. embryo expression (dissected): '276.335' Avg. embryo expression (LCM): '146.709' |
||||
| AT1G75230 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.87607 x 10-1 | 8 | 1 | 3 | 10 | 88.89% | 76.92% | 9 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.381654' Avg. expression score for this sample: '145.96' Avg. expression score in LCM sample: '138.675' Tissue used: 'full endosperm' |
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| AT1G75230 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 0 | 2 | 3 | 100.00% | 60.00% | 3 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.381654' Avg. expression score for this sample: '163.893' Avg. expression score in LCM sample: '138.675' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G75230 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.25806 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75230 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 10 | 2 | 83.33% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75230 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.68915 x 10-1 | 23 | 2 | 92.00% | 25 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75220 | ERDL6 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.86934 x 10-1 | 26 | 7 | 78.79% | 33 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G75220 | ERDL6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.77082 x 10-1 | 10 | 5 | 66.67% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G75220 | ERDL6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.52609 x 10-1 | 12 | 3 | 80.00% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G75220 | ERDL6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 11 | 7 | 5 | 16 | 61.11% | 76.19% | 18 | 21 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.785282' Avg. expression score for this sample: '199.139' Avg. expression score in LCM sample: '167.806' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G75220 | ERDL6 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.37986 x 10-1 | 11 | 7 | 0 | 0 | 61.11% | 18 | 0 | TAIR8 |
Avg. embryo expression (dissected): '198.63' Avg. embryo expression (LCM): '123.175' |
||||
| AT1G75220 | ERDL6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.69253 x 10-1 | 28 | 6 | 20 | 31 | 82.35% | 60.78% | 34 | 51 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.785282' Avg. expression score for this sample: '202.776' Avg. expression score in LCM sample: '167.806' Tissue used: 'full endosperm' |
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| AT1G75210 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.0524 x 10-2 | 88 | 24 | 46 | 116 | 78.57% | 71.60% | 112 | 162 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.025181' Avg. expression score for this sample: '61.1183' Avg. expression score in LCM sample: '37.0975' Tissue used: 'full endosperm' |
|||||
| AT1G75210 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.88953 x 10-1 | 34 | 12 | 7 | 25 | 73.91% | 78.12% | 46 | 32 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.025181' Avg. expression score for this sample: '28.2681' Avg. expression score in LCM sample: '37.0975' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G75210 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.61831 x 10-1 | 24 | 29 | 6 | 7 | 45.28% | 53.85% | 53 | 13 | TAIR8 |
Avg. embryo expression (dissected): '33.3012' Avg. embryo expression (LCM): '48.9408' |
||||
| AT1G75210 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.62888 x 10-1 | 18 | 10 | 64.29% | 28 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75210 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.065 x 10-3 | 82 | 11 | 88.17% | 93 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75210 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.5 x 10-5 | 104 | 8 | 92.86% | 112 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75200 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.857 x 10-3 | 582 | 199 | 74.52% | 781 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75200 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 9.28427 x 10-1 | 883 | 411 | 68.24% | 1294 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75200 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 31 | 14 | 68.89% | 45 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75200 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.9554 x 10-1 | 180 | 189 | 40 | 54 | 48.78% | 57.45% | 369 | 94 | TAIR8 |
Avg. embryo expression (dissected): '324.566' Avg. embryo expression (LCM): '392.079' |
||||
| AT1G75200 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.0367 x 10-1 | 182 | 91 | 157 | 338 | 66.67% | 68.28% | 273 | 495 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.539363' Avg. expression score for this sample: '194.267' Avg. expression score in LCM sample: '75.077' Tissue used: 'full endosperm' |
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| AT1G75200 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.33513 x 10-1 | 81 | 41 | 37 | 93 | 66.39% | 71.54% | 122 | 130 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.539363' Avg. expression score for this sample: '112.97' Avg. expression score in LCM sample: '75.077' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G75190 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.66355 x 10-1 | 16 | 7 | 0 | 4 | 69.57% | 100.00% | 23 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.031442' Avg. expression score for this sample: '17.345' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G75190 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 28 | 29 | 7 | 7 | 49.12% | 50.00% | 57 | 14 | TAIR8 |
Avg. embryo expression (dissected): '98.5016' Avg. embryo expression (LCM): '68.3689' |
||||
| AT1G75190 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0896 x 10-2 | 6 | 2 | 0 | 24 | 75.00% | 100.00% | 8 | 24 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.031442' Avg. expression score for this sample: '31.642' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT1G75190 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75190 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.15653 x 10-1 | 2 | 1 | 66.67% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75190 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.11546 x 10-1 | 17 | 5 | 77.27% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75180 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.5 x 10-8 | 641 | 101 | 86.39% | 742 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75180 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.15982 x 10-1 | 466 | 176 | 72.59% | 642 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75180 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.35333 x 10-1 | 66 | 30 | 68.75% | 96 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75180 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.2 x 10-6 | 225 | 71 | 98 | 344 | 76.01% | 77.83% | 296 | 442 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '3.9e-06' Avg. expression score for this sample: '281.44' Avg. expression score in LCM sample: '102.121' Tissue used: 'full endosperm' |
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| AT1G75180 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.24278 x 10-1 | 98 | 35 | 34 | 91 | 73.68% | 72.80% | 133 | 125 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '3.9e-06' Avg. expression score for this sample: '303.514' Avg. expression score in LCM sample: '102.121' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G75180 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.53481 x 10-1 | 139 | 176 | 63 | 65 | 44.13% | 50.78% | 315 | 128 | TAIR8 |
Avg. embryo expression (dissected): '807.739' Avg. embryo expression (LCM): '358.007' |
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| AT1G75170 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.373 x 10-2 | 0 | 10 | 2 | 0 | 0.00% | 0.00% | 10 | 2 | TAIR8 |
Avg. embryo expression (dissected): '44.3476' Avg. embryo expression (LCM): '43.8797' |
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| AT1G75170 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 22 | 4 | 11 | 9 | 84.62% | 45.00% | 26 | 20 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.841132' Avg. expression score for this sample: '74.3681' Avg. expression score in LCM sample: '34.2314' Tissue used: 'full endosperm' |
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| AT1G75170 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.40405 x 10-1 | 7 | 2 | 0 | 3 | 77.78% | 100.00% | 9 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.841132' Avg. expression score for this sample: '40.8631' Avg. expression score in LCM sample: '34.2314' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G75170 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.13559 x 10-1 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75170 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 12 | 4 | 75.00% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75170 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.8144 x 10-2 | 35 | 6 | 85.37% | 41 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75166 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G75166 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G75166 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G75166 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '3.01664' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G75166 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
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| AT1G75166 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '4.09478' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G75163 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '2.29022' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G75163 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G75163 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT1G75163 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G75163 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G75163 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75160 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G75160 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G75160 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G75160 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.28571 x 10-1 | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | TAIR8 |
Avg. embryo expression (dissected): '2.32189' Avg. embryo expression (LCM): '0' |
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| AT1G75160 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.495015' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT1G75160 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 2 | 0 | 1 | 0.00% | 100.00% | 2 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.885324' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G75150 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.98387 x 10-1 | 14 | 18 | 4 | 9 | 43.75% | 69.23% | 32 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.664902' Avg. expression score for this sample: '51.2112' Avg. expression score in LCM sample: '35.569' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G75150 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 0.8515 | 22 | 22 | 5 | 8 | 50.00% | 61.54% | 44 | 13 | TAIR8 |
Avg. embryo expression (dissected): '126.219' Avg. embryo expression (LCM): '143.683' |
||||
| AT1G75150 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.92897 x 10-1 | 11 | 7 | 10 | 32 | 61.11% | 76.19% | 18 | 42 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.664902' Avg. expression score for this sample: '34.1344' Avg. expression score in LCM sample: '35.569' Tissue used: 'full endosperm' |
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| AT1G75150 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.71265 x 10-1 | 3 | 3 | 50.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75150 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.83757 x 10-1 | 120 | 49 | 71.01% | 169 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75150 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.03 x 10-4 | 68 | 10 | 87.18% | 78 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75140 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G75140 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G75140 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G75140 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '54.4848' Avg. expression score in LCM sample: '34.3343' Tissue used: 'full endosperm' |
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| AT1G75140 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '38.5575' Avg. expression score in LCM sample: '34.3343' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G75140 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '53.3103' Avg. embryo expression (LCM): '31.5974' |
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| AT1G75130 | CYP721A1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '55.0405' Avg. embryo expression (LCM): '42.4731' |
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| AT1G75130 | CYP721A1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '38.4822' Avg. expression score in LCM sample: '14.1982' Tissue used: 'full endosperm' |
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| AT1G75130 | CYP721A1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '30.8682' Avg. expression score in LCM sample: '14.1982' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G75130 | CYP721A1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75130 | CYP721A1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75130 | CYP721A1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75120 | RRA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.19372 x 10-1 | 14 | 8 | 63.64% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G75120 | RRA1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G75120 | RRA1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.2263 x 10-2 | 45 | 37 | 54.88% | 82 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G75120 | RRA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.89038 x 10-1 | 398 | 153 | 182 | 345 | 72.23% | 65.46% | 551 | 527 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.625774' Avg. expression score for this sample: '1428.84' Avg. expression score in LCM sample: '3111.93' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G75120 | RRA1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.30319 x 10-1 | 19 | 11 | 8 | 8 | 63.33% | 50.00% | 30 | 16 | TAIR8 |
Avg. embryo expression (dissected): '101.885' Avg. embryo expression (LCM): '57.0787' |
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| AT1G75120 | RRA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.31863 x 10-1 | 160 | 84 | 188 | 355 | 65.57% | 65.38% | 244 | 543 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.625774' Avg. expression score for this sample: '491.847' Avg. expression score in LCM sample: '3111.93' Tissue used: 'full endosperm' |
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| AT1G75110 | RRA2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.6859 x 10-2 | 13 | 3 | 1 | 23 | 81.25% | 95.83% | 16 | 24 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.054347' Avg. expression score for this sample: '19.8162' Avg. expression score in LCM sample: '2.822' Tissue used: 'full endosperm' |
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| AT1G75110 | RRA2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 4 | 3 | 0 | 1 | 57.14% | 100.00% | 7 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.054347' Avg. expression score for this sample: '10.3834' Avg. expression score in LCM sample: '2.822' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G75110 | RRA2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.03567 x 10-1 | 9 | 4 | 1 | 0 | 69.23% | 0.00% | 13 | 1 | TAIR8 |
Avg. embryo expression (dissected): '12.8063' Avg. embryo expression (LCM): '6.41743' |
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| AT1G75110 | RRA2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.98565 x 10-1 | 3 | 1 | 75.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G75110 | RRA2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.28261 x 10-1 | 11 | 0 | 100.00% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G75110 | RRA2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.28194 x 10-1 | 13 | 0 | 100.00% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G75100 | JAC1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75100 | JAC1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75100 | JAC1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G75100 | JAC1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '15.2329' Avg. embryo expression (LCM): '10.5115' |
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| AT1G75100 | JAC1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '27.1568' Avg. expression score in LCM sample: '6.48178' Tissue used: 'full endosperm' |
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| AT1G75100 | JAC1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '12.0402' Avg. expression score in LCM sample: '6.48178' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G75090 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.75188 x 10-1 | 25 | 6 | 9 | 13 | 80.65% | 59.09% | 31 | 22 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '89.291' Avg. expression score in LCM sample: '54.3088' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G75090 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 8 | 7 | 3 | 2 | 53.33% | 40.00% | 15 | 5 | TAIR8 |
Avg. embryo expression (dissected): '44.9861' Avg. embryo expression (LCM): '29.9648' |
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| AT1G75090 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.60646 x 10-1 | 21 | 7 | 19 | 24 | 75.00% | 55.81% | 28 | 43 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '35.5112' Avg. expression score in LCM sample: '54.3088' Tissue used: 'full endosperm' |
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| AT1G75090 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.05079 x 10-1 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |