Displaying data sets 128101 - 128200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G76180 ERD14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1264.27'
Avg. expression score in LCM sample: '271.97'
Tissue used: 'pure endosperm, no chalazal'
AT1G76180 ERD14 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76180 ERD14 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '75.9522'
Avg. embryo expression (LCM): '19.7798'
AT1G76180 ERD14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2305.11'
Avg. expression score in LCM sample: '271.97'
Tissue used: 'full endosperm'
AT1G76180 ERD14 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76180 ERD14 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.35385 x 10-1 14 8 63.64% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.53614 x 10-1 15 1 5 4 93.75% 44.44% 16 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.407547'
Avg. expression score for this sample: '23.7015'
Avg. expression score in LCM sample: '6.51118'
Tissue used: 'full endosperm'
AT1G76170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.23077 x 10-1 6 0 1 1 100.00% 50.00% 6 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.407547'
Avg. expression score for this sample: '16.4575'
Avg. expression score in LCM sample: '6.51118'
Tissue used: 'pure endosperm, no chalazal'
AT1G76170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 5 0 2 28.57% 100.00% 7 2 TAIR8 Avg. embryo expression (dissected): '30.7857'
Avg. embryo expression (LCM): '27.8047'
AT1G76170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.0051 x 10-2 7 7 50.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76160 sks5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.08598 x 10-1 18 10 64.29% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76160 sks5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 15 7 6 15 68.18% 71.43% 22 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '187.787'
Avg. expression score in LCM sample: '2.93958'
Tissue used: 'full endosperm'
AT1G76160 sks5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '33.1044'
Avg. embryo expression (LCM): '11.3027'
AT1G76160 sks5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 5 1 2 64.29% 66.67% 14 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '46.2616'
Avg. expression score in LCM sample: '2.93958'
Tissue used: 'pure endosperm, no chalazal'
AT1G76160 sks5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 50 23 68.49% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76160 sks5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.92114 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76150 ECH2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76150 ECH2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4047 x 10-2 16 0 100.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76150 ECH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 0 1 33.33% 100.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '206.612'
Avg. expression score in LCM sample: '52.545'
Tissue used: 'pure endosperm, no chalazal'
AT1G76150 ECH2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.38235 x 10-1 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76150 ECH2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '113.31'
Avg. embryo expression (LCM): '94.0135'
AT1G76150 ECH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 2 3 100.00% 60.00% 1 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '247.053'
Avg. expression score in LCM sample: '52.545'
Tissue used: 'full endosperm'
AT1G76140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.6772 x 10-2 86 22 52 133 79.63% 71.89% 108 185 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.048405'
Avg. expression score for this sample: '1329.76'
Avg. expression score in LCM sample: '838.193'
Tissue used: 'full endosperm'
AT1G76140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.2271 x 10-1 46 23 23 60 66.67% 72.29% 69 83 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.048405'
Avg. expression score for this sample: '875.313'
Avg. expression score in LCM sample: '838.193'
Tissue used: 'pure endosperm, no chalazal'
AT1G76140 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.85867 x 10-1 33 42 8 14 44.00% 63.64% 75 22 TAIR8 Avg. embryo expression (dissected): '1147.55'
Avg. embryo expression (LCM): '1281.08'
AT1G76140 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.4 x 10-5 181 127 58.77% 308 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76140 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.028 x 10-3 254 51 83.28% 305 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76140 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.554 x 10-3 16 17 48.48% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76135 MIR394B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76135 MIR394B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76135 MIR394B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76135 MIR394B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G76135 MIR394B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G76135 MIR394B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G76130 AMY2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.92075 x 10-1 2 1 3 1 66.67% 25.00% 3 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.10991'
Avg. expression score in LCM sample: '2.98368'
Tissue used: 'pure endosperm, no chalazal'
AT1G76130 AMY2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.84251 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76130 AMY2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '4.67911'
Avg. embryo expression (LCM): '1.69541'
AT1G76130 AMY2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.84541 x 10-1 8 0 2 4 100.00% 66.67% 8 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.87093'
Avg. expression score in LCM sample: '2.98368'
Tissue used: 'full endosperm'
AT1G76130 AMY2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.02675 x 10-1 13 1 92.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76130 AMY2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.18182 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.16261 x 10-1 9 6 60.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3 x 10-5 80 2 97.56% 82 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.8033 x 10-2 24 2 13 35 92.31% 72.92% 26 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.209041'
Avg. expression score for this sample: '35.4251'
Avg. expression score in LCM sample: '10.3032'
Tissue used: 'full endosperm'
AT1G76120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 11 6 3 5 64.71% 62.50% 17 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.209041'
Avg. expression score for this sample: '15.0802'
Avg. expression score in LCM sample: '10.3032'
Tissue used: 'pure endosperm, no chalazal'
AT1G76120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 6 8 3 3 42.86% 50.00% 14 6 TAIR8 Avg. embryo expression (dissected): '30.0248'
Avg. embryo expression (LCM): '54.2782'
AT1G76120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.6681 x 10-1 39 16 70.91% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76110 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.42986 x 10-1 29 18 61.70% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.02789 x 10-1 298 175 153 293 63.00% 65.70% 473 446 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.41106'
Avg. expression score for this sample: '260.266'
Avg. expression score in LCM sample: '85.3949'
Tissue used: 'full endosperm'
AT1G76110 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.79065 x 10-1 176 137 24 22 56.23% 47.83% 313 46 TAIR8 Avg. embryo expression (dissected): '165.676'
Avg. embryo expression (LCM): '279.077'
AT1G76110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 160 50 82 105 76.19% 56.15% 210 187 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.41106'
Avg. expression score for this sample: '155.64'
Avg. expression score in LCM sample: '85.3949'
Tissue used: 'pure endosperm, no chalazal'
AT1G76110 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.16 x 10-4 52 7 88.14% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76110 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.7702 x 10-1 30 17 63.83% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76100 PETE1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.32431 x 10-1 31 12 72.09% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76100 PETE1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.79 x 10-4 74 17 81.32% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76100 PETE1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.98153 x 10-1 294 88 93 76 76.96% 44.97% 382 169 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.152494'
Avg. expression score for this sample: '388.058'
Avg. expression score in LCM sample: '60.2174'
Tissue used: 'pure endosperm, no chalazal'
AT1G76100 PETE1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.39 x 10-4 11 24 31.43% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76100 PETE1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.4 x 10-8 854 402 243 112 67.99% 31.55% 1256 355 TAIR8 Avg. embryo expression (dissected): '1839.88'
Avg. embryo expression (LCM): '707.525'
AT1G76100 PETE1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.426 x 10-2 291 138 131 135 67.83% 50.75% 429 266 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.152494'
Avg. expression score for this sample: '293.814'
Avg. expression score in LCM sample: '60.2174'
Tissue used: 'full endosperm'
AT1G76090 SMT3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '38.302'
Avg. expression score in LCM sample: '71.7699'
Tissue used: 'full endosperm'
AT1G76090 SMT3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11.0951'
Avg. expression score in LCM sample: '71.7699'
Tissue used: 'pure endosperm, no chalazal'
AT1G76090 SMT3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '102.141'
Avg. embryo expression (LCM): '46.6802'
AT1G76090 SMT3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76090 SMT3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76090 SMT3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76080 CDSP32 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76080 CDSP32 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76080 CDSP32 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76080 CDSP32 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.4722'
Avg. expression score in LCM sample: '2.33697'
Tissue used: 'full endosperm'
AT1G76080 CDSP32 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '15.5469'
Avg. embryo expression (LCM): '1.99681'
AT1G76080 CDSP32 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '21.1161'
Avg. expression score in LCM sample: '2.33697'
Tissue used: 'pure endosperm, no chalazal'
AT1G76070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.61996'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G76070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.605726'
Avg. embryo expression (LCM): '0'
AT1G76070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11.4417'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G76070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76065 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76065 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76065 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.31094 x 10-1 5 3 2 10 62.50% 83.33% 8 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.520195'
Avg. expression score for this sample: '53.264'
Avg. expression score in LCM sample: '17.0937'
Tissue used: 'full endosperm'
AT1G76065 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.44444 x 10-1 0 0 0 5 100.00% 0 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.520195'
Avg. expression score for this sample: '10.5782'
Avg. expression score in LCM sample: '17.0937'
Tissue used: 'pure endosperm, no chalazal'
AT1G76065 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '9.39186'
Avg. embryo expression (LCM): '58.4099'
AT1G76065 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.73897 x 10-1 16 1 94.12% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76062 MIR835A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76062 MIR835A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G76062 MIR835A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G76062 MIR835A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G76062 MIR835A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76062 MIR835A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76060 EMB1793 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.10228 x 10-1 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76060 EMB1793 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.9878 x 10-2 30 3 90.91% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76060 EMB1793 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.78551 x 10-1 12 7 4 4 63.16% 50.00% 19 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.655576'
Avg. expression score for this sample: '101.516'
Avg. expression score in LCM sample: '78.384'
Tissue used: 'pure endosperm, no chalazal'
AT1G76060 EMB1793 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 28 11 71.79% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G76060 EMB1793 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.93027 x 10-1 8 2 0 2 80.00% 100.00% 10 2 TAIR8 Avg. embryo expression (dissected): '81.2611'
Avg. embryo expression (LCM): '120.562'
AT1G76060 EMB1793 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.27386 x 10-1 8 1 1 10 88.89% 90.91% 9 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.655576'
Avg. expression score for this sample: '79.3999'
Avg. expression score in LCM sample: '78.384'
Tissue used: 'full endosperm'
AT1G76050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.84541 x 10-1 7 1 1 5 87.50% 83.33% 8 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.749447'
Avg. expression score for this sample: '29.8192'
Avg. expression score in LCM sample: '24.0017'
Tissue used: 'full endosperm'
AT1G76050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 3 1 0 62.50% 0.00% 8 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.749447'
Avg. expression score for this sample: '17.1859'
Avg. expression score in LCM sample: '24.0017'
Tissue used: 'pure endosperm, no chalazal'
AT1G76050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.93027 x 10-1 9 2 0 1 81.82% 100.00% 11 1 TAIR8 Avg. embryo expression (dissected): '35.6032'
Avg. embryo expression (LCM): '37.0729'
AT1G76050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.58486 x 10-1 17 2 89.47% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'