| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G48680 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.7 x 10-15 | 54 | 115 | 31.95% | 169 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48680 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.1 x 10-15 | 259 | 17 | 93.84% | 276 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48675 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT5G48675 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT5G48675 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT5G48675 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G48675 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G48675 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G48670 | AGL80 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '35.1559' Avg. expression score in LCM sample: '23.5167' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT5G48670 | AGL80 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 1 | 1 | 0 | 66.67% | 0.00% | 3 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '53.0668' Avg. expression score in LCM sample: '23.5167' Tissue used: 'full endosperm' |
||||
| AT5G48670 | AGL80 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '36.6057' Avg. embryo expression (LCM): '23.4469' |
|||||
| AT5G48670 | AGL80 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48670 | AGL80 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.66667 x 10-1 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G48670 | AGL80 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.66667 x 10-1 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G48660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.33222 x 10-1 | 4 | 2 | 6 | 6 | 66.67% | 50.00% | 6 | 12 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.116221' Avg. expression score for this sample: '7.51049' Avg. expression score in LCM sample: '3.64508' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G48660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.57251 x 10-1 | 16 | 12 | 19 | 20 | 57.14% | 51.28% | 28 | 39 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.116221' Avg. expression score for this sample: '20.5153' Avg. expression score in LCM sample: '3.64508' Tissue used: 'full endosperm' |
|||||
| AT5G48660 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 9 | 8 | 3 | 2 | 52.94% | 40.00% | 17 | 5 | TAIR8 |
Avg. embryo expression (dissected): '15.4308' Avg. embryo expression (LCM): '16.6401' |
||||
| AT5G48660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 2 | 50.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 1 | 66.67% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48660 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.016 x 10-3 | 16 | 1 | 94.12% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48657 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT5G48657 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 4 | 1 | 2 | 0 | 80.00% | 0.00% | 5 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.948736' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT5G48657 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Avg. embryo expression (dissected): '.502319' Avg. embryo expression (LCM): '0' |
|||||
| AT5G48657 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G48657 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.43665 x 10-1 | 7 | 3 | 70.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48657 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.681 x 10-3 | 44 | 0 | 100.00% | 44 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48655 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.33752 x 10-1 | 65 | 54 | 46 | 94 | 54.62% | 67.14% | 119 | 140 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.083379' Avg. expression score for this sample: '80.1433' Avg. expression score in LCM sample: '44.3877' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G48655 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.76 x 10-4 | 142 | 30 | 45 | 136 | 82.56% | 75.14% | 172 | 181 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.083379' Avg. expression score for this sample: '89.2917' Avg. expression score in LCM sample: '44.3877' Tissue used: 'full endosperm' |
|||||
| AT5G48655 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.09848 x 10-1 | 52 | 61 | 29 | 24 | 46.02% | 45.28% | 113 | 53 | TAIR8 |
Avg. embryo expression (dissected): '85.9528' Avg. embryo expression (LCM): '61.3486' |
||||
| AT5G48655 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.04249 x 10-1 | 56 | 26 | 68.29% | 82 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48655 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.29214 x 10-1 | 330 | 123 | 72.85% | 453 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48655 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.6 x 10-8 | 266 | 40 | 86.93% | 306 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.8 x 10-5 | 109 | 3 | 14 | 13 | 97.32% | 48.15% | 112 | 27 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '5.8e-09' Avg. expression score for this sample: '1121.59' Avg. expression score in LCM sample: '294.855' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G48650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.2 x 10-5 | 279 | 13 | 75 | 70 | 95.55% | 48.28% | 292 | 145 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '5.8e-09' Avg. expression score for this sample: '819.502' Avg. expression score in LCM sample: '294.855' Tissue used: 'full endosperm' |
|||||
| AT5G48650 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.107 x 10-3 | 32 | 1 | 6 | 0 | 96.97% | 0.00% | 33 | 6 | TAIR8 |
Avg. embryo expression (dissected): '621.722' Avg. embryo expression (LCM): '245.043' |
||||
| AT5G48650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.07 x 10-4 | 10 | 12 | 45.45% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.63 x 10-3 | 45 | 22 | 67.16% | 67 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48650 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 741 | 1 | 99.87% | 742 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48640 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.25596 x 10-1 | 19 | 4 | 5 | 13 | 82.61% | 72.22% | 23 | 18 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.35372' Avg. expression score for this sample: '28.3547' Avg. expression score in LCM sample: '17.5493' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G48640 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.73374 x 10-1 | 18 | 7 | 21 | 44 | 72.00% | 67.69% | 25 | 65 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.35372' Avg. expression score for this sample: '62.9648' Avg. expression score in LCM sample: '17.5493' Tissue used: 'full endosperm' |
|||||
| AT5G48640 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 18 | 20 | 3 | 3 | 47.37% | 50.00% | 38 | 6 | TAIR8 |
Avg. embryo expression (dissected): '41.4647' Avg. embryo expression (LCM): '32.7276' |
||||
| AT5G48640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.12604 x 10-1 | 10 | 2 | 83.33% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.17048 x 10-1 | 33 | 7 | 82.50% | 40 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48640 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.784 x 10-3 | 69 | 8 | 89.61% | 77 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.77617 x 10-1 | 7 | 1 | 2 | 4 | 87.50% | 66.67% | 8 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.595538' Avg. expression score for this sample: '9.99089' Avg. expression score in LCM sample: '6.49648' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G48630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.45179 x 10-1 | 14 | 6 | 12 | 29 | 70.00% | 70.73% | 20 | 41 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.595538' Avg. expression score for this sample: '19.3137' Avg. expression score in LCM sample: '6.49648' Tissue used: 'full endosperm' |
|||||
| AT5G48630 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 6 | 9 | 1 | 4 | 40.00% | 80.00% | 15 | 5 | TAIR8 |
Avg. embryo expression (dissected): '14.8554' Avg. embryo expression (LCM): '30.5676' |
||||
| AT5G48630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.82109 x 10-1 | 7 | 0 | 100.00% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.8 x 10-6 | 94 | 3 | 96.91% | 97 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48630 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.73 x 10-3 | 85 | 10 | 89.47% | 95 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.97961 x 10-1 | 226 | 25 | 95 | 32 | 90.04% | 25.20% | 251 | 127 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.160024' Avg. expression score for this sample: '61.1235' Avg. expression score in LCM sample: '41.9332' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G48620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.434 x 10-2 | 467 | 50 | 323 | 152 | 90.33% | 32.00% | 517 | 475 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.160024' Avg. expression score for this sample: '111.025' Avg. expression score in LCM sample: '41.9332' Tissue used: 'full endosperm' |
|||||
| AT5G48620 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.2 x 10-15 | 504 | 52 | 176 | 23 | 90.65% | 11.56% | 556 | 199 | TAIR8 |
Avg. embryo expression (dissected): '206.237' Avg. embryo expression (LCM): '128.035' |
||||
| AT5G48620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.6 x 10-6 | 28 | 50 | 35.90% | 78 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.04 x 10-4 | 74 | 79 | 48.37% | 153 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48620 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 502 | 29 | 94.54% | 531 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48610 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.99188 x 10-1 | 1024 | 193 | 515 | 457 | 84.14% | 47.02% | 1217 | 972 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.5e-11' Avg. expression score for this sample: '432.898' Avg. expression score in LCM sample: '43.5205' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G48610 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.6 x 10-15 | 1919 | 489 | 667 | 1396 | 79.69% | 67.67% | 2408 | 2063 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.5e-11' Avg. expression score for this sample: '575.448' Avg. expression score in LCM sample: '43.5205' Tissue used: 'full endosperm' |
|||||
| AT5G48610 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.4 x 10-6 | 661 | 286 | 242 | 101 | 69.80% | 29.45% | 947 | 343 | TAIR8 |
Avg. embryo expression (dissected): '368.518' Avg. embryo expression (LCM): '143.783' |
||||
| AT5G48610 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.9079 x 10-1 | 163 | 56 | 74.43% | 219 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48610 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.531 x 10-3 | 1050 | 332 | 75.98% | 1382 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48610 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 2743 | 347 | 88.77% | 3090 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48605 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT5G48605 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT5G48605 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT5G48605 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G48605 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G48605 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G48600 | SMC3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.3907 x 10-2 | 285 | 255 | 152 | 397 | 52.78% | 72.31% | 540 | 549 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.070904' Avg. expression score for this sample: '155.35' Avg. expression score in LCM sample: '67.875' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT5G48600 | SMC3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.60271 x 10-1 | 167 | 127 | 257 | 560 | 56.80% | 68.54% | 294 | 817 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.070904' Avg. expression score for this sample: '123.026' Avg. expression score in LCM sample: '67.875' Tissue used: 'full endosperm' |
||||
| AT5G48600 | SMC3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.04059 x 10-1 | 481 | 578 | 206 | 255 | 45.42% | 55.31% | 1059 | 461 | TAIR8 |
Avg. embryo expression (dissected): '338.573' Avg. embryo expression (LCM): '244.968' |
|||
| AT5G48600 | SMC3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.74661 x 10-1 | 70 | 47 | 59.83% | 117 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G48600 | SMC3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.86601 x 10-1 | 463 | 230 | 66.81% | 693 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G48600 | SMC3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.70864 x 10-1 | 390 | 231 | 62.80% | 621 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G48595 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT5G48595 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT5G48595 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT5G48595 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G48595 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G48595 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G48590 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 2 | 1 | 2 | 60.00% | 66.67% | 5 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.104227' Avg. expression score for this sample: '36.1893' Avg. expression score in LCM sample: '29.8956' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G48590 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.0411 x 10-2 | 14 | 4 | 5 | 32 | 77.78% | 86.49% | 18 | 37 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.104227' Avg. expression score for this sample: '50.6165' Avg. expression score in LCM sample: '29.8956' Tissue used: 'full endosperm' |
|||||
| AT5G48590 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 4 | 0 | 2 | 20.00% | 100.00% | 5 | 2 | TAIR8 |
Avg. embryo expression (dissected): '45.8595' Avg. embryo expression (LCM): '48.1496' |
||||
| AT5G48590 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.3625 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48590 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.70506 x 10-1 | 22 | 4 | 84.62% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48590 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.12145 x 10-1 | 12 | 6 | 66.67% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48580 | FKBP15-2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '544.047' Avg. expression score in LCM sample: '376.223' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT5G48580 | FKBP15-2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '713.194' Avg. expression score in LCM sample: '376.223' Tissue used: 'full endosperm' |
||||||
| AT5G48580 | FKBP15-2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '675.236' Avg. embryo expression (LCM): '550.781' |
|||||
| AT5G48580 | FKBP15-2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48580 | FKBP15-2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48580 | FKBP15-2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G48575 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT5G48575 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.675945' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT5G48575 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.723092' Avg. embryo expression (LCM): '0' |
||||||
| AT5G48575 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G48575 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G48575 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G48570 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.56 x 10-4 | 305 | 139 | 195 | 627 | 68.69% | 76.28% | 444 | 822 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.8e-12' Avg. expression score for this sample: '1642.57' Avg. expression score in LCM sample: '13.8895' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G48570 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.4 x 10-10 | 393 | 112 | 106 | 429 | 77.82% | 80.19% | 505 | 535 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1.8e-12' Avg. expression score for this sample: '1534.68' Avg. expression score in LCM sample: '13.8895' Tissue used: 'full endosperm' |