| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G77660 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G77660 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '29.0715' Avg. embryo expression (LCM): '29.9396' |
||||||
| AT1G77660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '86.8562' Avg. expression score in LCM sample: '2.49865' Tissue used: 'full endosperm' |
|||||||
| AT1G77660 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '11.4183' Avg. expression score in LCM sample: '2.49865' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G77655 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 1 | 0 | 1 | 50.00% | 100.00% | 2 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '4.13523' Avg. expression score in LCM sample: '10.4208' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G77655 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT1G77655 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 0 | 3 | 0 | 100.00% | 0.00% | 2 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '2.74035' Avg. expression score in LCM sample: '10.4208' Tissue used: 'full endosperm' |
|||||
| AT1G77655 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.36364 x 10-1 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77655 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G77655 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 3 | 40.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 222 | 383 | 36.69% | 605 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.157192' Avg. expression score in LCM sample: '3.83616' Tissue used: 'full endosperm' |
|||||||
| AT1G77650 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.222776' Avg. expression score in LCM sample: '3.83616' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G77650 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT1G77650 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G77650 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 322 | 32 | 90.96% | 354 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77640 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.2 | 16 | 0 | 100.00% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G77640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.07692 x 10-1 | 9 | 0 | 100.00% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77640 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1.54756' Avg. embryo expression (LCM): '0' |
|||||
| AT1G77640 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 1 | 0 | 3 | 0.00% | 100.00% | 1 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '8.25493' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT1G77640 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.277724' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G77630 | LYM3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 7 | 2 | 4 | 6 | 77.78% | 60.00% | 9 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.323757' Avg. expression score for this sample: '11.7065' Avg. expression score in LCM sample: '7.87808' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G77630 | LYM3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.74862 x 10-1 | 15 | 17 | 8 | 1 | 46.88% | 11.11% | 32 | 9 | TAIR8 |
Avg. embryo expression (dissected): '43.73' Avg. embryo expression (LCM): '51.6158' |
|||
| AT1G77630 | LYM3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.61741 x 10-1 | 12 | 10 | 17 | 21 | 54.55% | 55.26% | 22 | 38 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.323757' Avg. expression score for this sample: '17.9283' Avg. expression score in LCM sample: '7.87808' Tissue used: 'full endosperm' |
||||
| AT1G77630 | LYM3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.51229 x 10-1 | 9 | 3 | 75.00% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G77630 | LYM3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.57207 x 10-1 | 18 | 6 | 75.00% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G77630 | LYM3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.20706 x 10-1 | 11 | 2 | 84.62% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G77620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.57969 x 10-1 | 107 | 60 | 64.07% | 167 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.22975 x 10-1 | 105 | 50 | 82 | 170 | 67.74% | 67.46% | 155 | 252 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.900036' Avg. expression score for this sample: '143.115' Avg. expression score in LCM sample: '31.7622' Tissue used: 'full endosperm' |
|||||
| AT1G77620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 40 | 20 | 36 | 69 | 66.67% | 65.71% | 60 | 105 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.900036' Avg. expression score for this sample: '74.1596' Avg. expression score in LCM sample: '31.7622' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G77620 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 9 | 13 | 4 | 6 | 40.91% | 60.00% | 22 | 10 | TAIR8 |
Avg. embryo expression (dissected): '39.902' Avg. embryo expression (LCM): '35.1389' |
||||
| AT1G77620 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.6 x 10-6 | 98 | 14 | 87.50% | 112 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 12 | 5 | 70.59% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77610 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.41383 x 10-1 | 12 | 2 | 85.71% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77610 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.3 x 10-9 | 176 | 6 | 96.70% | 182 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77610 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.5229 x 10-2 | 87 | 12 | 87.88% | 99 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77610 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.28581 x 10-1 | 21 | 10 | 4 | 9 | 67.74% | 69.23% | 31 | 13 | TAIR8 |
Avg. embryo expression (dissected): '241.65' Avg. embryo expression (LCM): '245.256' |
||||
| AT1G77610 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.00017 x 10-1 | 53 | 7 | 18 | 34 | 88.33% | 65.38% | 60 | 52 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.009204' Avg. expression score for this sample: '421.099' Avg. expression score in LCM sample: '767.613' Tissue used: 'full endosperm' |
|||||
| AT1G77610 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.8598 x 10-2 | 54 | 16 | 15 | 51 | 77.14% | 77.27% | 70 | 66 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.009204' Avg. expression score for this sample: '457.347' Avg. expression score in LCM sample: '767.613' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G77600 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.50839 x 10-1 | 15 | 7 | 2 | 15 | 68.18% | 88.24% | 22 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.081871' Avg. expression score for this sample: '8.13329' Avg. expression score in LCM sample: '4.80622' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G77600 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.16301 x 10-1 | 14 | 11 | 9 | 3 | 56.00% | 25.00% | 25 | 12 | TAIR8 |
Avg. embryo expression (dissected): '20.2206' Avg. embryo expression (LCM): '25.293' |
||||
| AT1G77600 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.94059 x 10-1 | 39 | 12 | 17 | 48 | 76.47% | 73.85% | 51 | 65 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.081871' Avg. expression score for this sample: '19.4128' Avg. expression score in LCM sample: '4.80622' Tissue used: 'full endosperm' |
|||||
| AT1G77600 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.7 x 10-5 | 91 | 4 | 95.79% | 95 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77600 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.81228 x 10-1 | 7 | 1 | 87.50% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77600 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 52 | 16 | 76.47% | 68 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77590 | LACS9 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.5 x 10-10 | 348 | 66 | 84.06% | 414 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G77590 | LACS9 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.931 x 10-3 | 214 | 171 | 272 | 875 | 55.58% | 76.29% | 385 | 1147 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.03142' Avg. expression score for this sample: '745.813' Avg. expression score in LCM sample: '556.096' Tissue used: 'full endosperm' |
||||
| AT1G77590 | LACS9 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 9.50105 x 10-1 | 165 | 119 | 74 | 215 | 58.10% | 74.39% | 284 | 289 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.03142' Avg. expression score for this sample: '717.054' Avg. expression score in LCM sample: '556.096' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT1G77590 | LACS9 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.84413 x 10-1 | 347 | 378 | 96 | 141 | 47.86% | 59.49% | 725 | 237 | TAIR8 |
Avg. embryo expression (dissected): '1829.11' Avg. embryo expression (LCM): '1198.78' |
|||
| AT1G77590 | LACS9 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.73894 x 10-1 | 57 | 19 | 75.00% | 76 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G77590 | LACS9 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.02246 x 10-1 | 260 | 110 | 70.27% | 370 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G77580 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.81849 x 10-1 | 39 | 19 | 67.24% | 58 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.8927 x 10-1 | 39 | 24 | 61.90% | 63 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.92771 x 10-1 | 8 | 8 | 50.00% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77580 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.72243 x 10-1 | 253 | 210 | 134 | 99 | 54.64% | 42.49% | 463 | 233 | TAIR8 |
Avg. embryo expression (dissected): '681.711' Avg. embryo expression (LCM): '405.29' |
||||
| AT1G77580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.86524 x 10-1 | 447 | 186 | 330 | 529 | 70.62% | 61.58% | 633 | 859 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.165418' Avg. expression score for this sample: '899.176' Avg. expression score in LCM sample: '411.953' Tissue used: 'full endosperm' |
|||||
| AT1G77580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.97431 x 10-1 | 463 | 185 | 273 | 358 | 71.45% | 56.74% | 648 | 631 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.165418' Avg. expression score for this sample: '845.129' Avg. expression score in LCM sample: '411.953' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G77570 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 2 | 1 | 0 | 0 | 66.67% | 3 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3.14137' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT1G77570 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '2.02921' Avg. embryo expression (LCM): '7.69841' |
||||||
| AT1G77570 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 13 | 1 | 6 | 5 | 92.86% | 45.45% | 14 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '15.8189' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT1G77570 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.10345 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77570 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.8818 x 10-2 | 24 | 2 | 92.31% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77570 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 13 | 4 | 76.47% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77560 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G77560 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT1G77560 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G77560 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT1G77560 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G77560 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G77550 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.52454 x 10-1 | 10 | 3 | 76.92% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77550 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.39554 x 10-1 | 91 | 45 | 66.91% | 136 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77550 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.158 x 10-3 | 122 | 30 | 80.26% | 152 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77550 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.36586 x 10-1 | 65 | 91 | 7 | 13 | 41.67% | 65.00% | 156 | 20 | TAIR8 |
Avg. embryo expression (dissected): '123.761' Avg. embryo expression (LCM): '189.509' |
||||
| AT1G77550 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.15942 x 10-1 | 28 | 13 | 28 | 84 | 68.29% | 75.00% | 41 | 112 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.714127' Avg. expression score for this sample: '66.3656' Avg. expression score in LCM sample: '43.7263' Tissue used: 'full endosperm' |
|||||
| AT1G77550 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.2149 x 10-2 | 25 | 35 | 17 | 35 | 41.67% | 67.31% | 60 | 52 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.714127' Avg. expression score for this sample: '47.8593' Avg. expression score in LCM sample: '43.7263' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G77540 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 22 | 2 | 13 | 12 | 91.67% | 48.00% | 24 | 25 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.140293' Avg. expression score for this sample: '147.328' Avg. expression score in LCM sample: '106.839' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G77540 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.05707 x 10-1 | 10 | 12 | 6 | 5 | 45.45% | 45.45% | 22 | 11 | TAIR8 |
Avg. embryo expression (dissected): '145.272' Avg. embryo expression (LCM): '192.448' |
||||
| AT1G77540 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.7634 x 10-2 | 24 | 8 | 10 | 42 | 75.00% | 80.77% | 32 | 52 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.140293' Avg. expression score for this sample: '158.567' Avg. expression score in LCM sample: '106.839' Tissue used: 'full endosperm' |
|||||
| AT1G77540 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.4 x 10-7 | 73 | 0 | 100.00% | 73 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77540 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.79697 x 10-1 | 7 | 1 | 87.50% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77540 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.50562 x 10-1 | 36 | 9 | 80.00% | 45 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77530 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 10 | 5 | 66.67% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77530 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.68706 x 10-1 | 101 | 78 | 57 | 184 | 56.42% | 76.35% | 179 | 241 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.892233' Avg. expression score for this sample: '88.9356' Avg. expression score in LCM sample: '38.0676' Tissue used: 'full endosperm' |
|||||
| AT1G77530 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.61663 x 10-1 | 20 | 11 | 15 | 27 | 64.52% | 64.29% | 31 | 42 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.892233' Avg. expression score for this sample: '31.0122' Avg. expression score in LCM sample: '38.0676' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G77530 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.41979 x 10-1 | 11 | 31 | 3 | 11 | 26.19% | 78.57% | 42 | 14 | TAIR8 |
Avg. embryo expression (dissected): '34.919' Avg. embryo expression (LCM): '5.91509' |
||||
| AT1G77530 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.4798 x 10-1 | 18 | 11 | 62.07% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77530 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.542 x 10-3 | 8 | 15 | 34.78% | 23 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77525 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 2238 | 255 | 89.77% | 2493 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77525 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.54 x 10-4 | 2 | 16 | 11.11% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77525 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 1216 | 3228 | 27.36% | 4444 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G77525 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 9.311 x 10-3 | 32 | 1 | 7 | 0 | 96.97% | 0.00% | 33 | 7 | TAIR8 |
Avg. embryo expression (dissected): '396.787' Avg. embryo expression (LCM): '46.1653' |
||||
| AT1G77525 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 0.0 | 420 | 25 | 762 | 219 | 94.38% | 22.32% | 445 | 981 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.5e-15' Avg. expression score for this sample: '3461.94' Avg. expression score in LCM sample: '2748.66' Tissue used: 'full endosperm' |
|||||
| AT1G77525 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.7382 x 10-2 | 623 | 26 | 232 | 37 | 95.99% | 13.75% | 649 | 269 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '2.5e-15' Avg. expression score for this sample: '7798.63' Avg. expression score in LCM sample: '2748.66' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G77520 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '121.058' Avg. expression score in LCM sample: '13.0077' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G77520 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '54.0302' Avg. embryo expression (LCM): '32.489' |
||||||
| AT1G77520 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '499.091' Avg. expression score in LCM sample: '13.0077' Tissue used: 'full endosperm' |
|||||||
| AT1G77520 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G77520 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G77520 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |