| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT1G79190 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.06749 x 10-1 | 35 | 8 | 81.40% | 43 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79190 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.17799 x 10-1 | 37 | 9 | 80.43% | 46 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79180 | MYB63 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 8 | 0 | 100.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G79180 | MYB63 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G79180 | MYB63 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 11 | 1 | 91.67% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G79180 | MYB63 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '5.56385' Avg. expression score in LCM sample: '2.64562' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G79180 | MYB63 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '20.7803' Avg. expression score in LCM sample: '2.64562' Tissue used: 'full endosperm' |
|||||
| AT1G79180 | MYB63 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.261787' Avg. embryo expression (LCM): '0' |
|||||
| AT1G79170 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.09 x 10-4 | 274 | 290 | 308 | 148 | 48.58% | 32.46% | 564 | 456 | TAIR8 |
Avg. embryo expression (dissected): '1659.34' Avg. embryo expression (LCM): '124.091' |
||||
| AT1G79170 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.5 x 10-9 | 85 | 37 | 23 | 242 | 69.67% | 91.32% | 122 | 265 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.002966' Avg. expression score for this sample: '246.419' Avg. expression score in LCM sample: '29.0431' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G79170 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.4306 x 10-2 | 88 | 14 | 86.27% | 102 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79170 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.895 x 10-3 | 37 | 40 | 26 | 19 | 48.05% | 42.22% | 77 | 45 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.002966' Avg. expression score for this sample: '73.2948' Avg. expression score in LCM sample: '29.0431' Tissue used: 'full endosperm' |
|||||
| AT1G79170 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79170 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.47613 x 10-1 | 37 | 19 | 66.07% | 56 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79160 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.97229 x 10-1 | 19 | 7 | 73.08% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79160 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 0.0381 | 26 | 3 | 10 | 36 | 89.66% | 78.26% | 29 | 46 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.123612' Avg. expression score for this sample: '39.9482' Avg. expression score in LCM sample: '18.2989' Tissue used: 'full endosperm' |
|||||
| AT1G79160 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 10 | 7 | 4 | 8 | 58.82% | 66.67% | 17 | 12 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.123612' Avg. expression score for this sample: '23.0491' Avg. expression score in LCM sample: '18.2989' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G79160 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 32 | 27 | 15 | 12 | 54.24% | 44.44% | 59 | 27 | TAIR8 |
Avg. embryo expression (dissected): '135.479' Avg. embryo expression (LCM): '70.3531' |
||||
| AT1G79160 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.4 x 10-9 | 193 | 3 | 98.47% | 196 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79160 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.5996 x 10-2 | 49 | 4 | 92.45% | 53 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79150 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.7442 x 10-2 | 115 | 45 | 71.88% | 160 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79150 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.4667 x 10-1 | 4 | 1 | 80.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79150 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.23 x 10-4 | 119 | 29 | 80.41% | 148 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79150 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 4 | 8 | 1 | 14 | 33.33% | 93.33% | 12 | 15 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.325302' Avg. expression score for this sample: '63.0551' Avg. expression score in LCM sample: '29.6898' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT1G79150 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.59564 x 10-1 | 21 | 15 | 20 | 26 | 58.33% | 56.52% | 36 | 46 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.325302' Avg. expression score for this sample: '79.2423' Avg. expression score in LCM sample: '29.6898' Tissue used: 'full endosperm' |
|||||
| AT1G79150 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.1821 x 10-2 | 36 | 16 | 7 | 8 | 69.23% | 53.33% | 52 | 15 | TAIR8 |
Avg. embryo expression (dissected): '215.631' Avg. embryo expression (LCM): '356.978' |
||||
| AT1G79130 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT1G79130 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G79130 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G79130 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.48545' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT1G79130 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G79130 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G79120 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G79120 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '4.24777' Avg. expression score in LCM sample: '1.60207' Tissue used: 'full endosperm' |
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| AT1G79120 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.6868' Avg. expression score in LCM sample: '1.60207' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT1G79120 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 2 | 0 | 2 | 33.33% | 100.00% | 3 | 2 | TAIR8 |
Avg. embryo expression (dissected): '6.56915' Avg. embryo expression (LCM): '18.5365' |
||||
| AT1G79120 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 1 | 80.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79120 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79110 | BRG2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.63748 x 10-1 | 77 | 54 | 58.78% | 131 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G79110 | BRG2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.10385 x 10-1 | 9 | 8 | 52.94% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G79110 | BRG2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.4 x 10-5 | 53 | 5 | 91.38% | 58 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G79110 | BRG2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.26951 x 10-1 | 135 | 76 | 105 | 170 | 63.98% | 61.82% | 211 | 275 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.644214' Avg. expression score for this sample: '682.493' Avg. expression score in LCM sample: '44.1084' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G79110 | BRG2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.59117 x 10-1 | 70 | 21 | 30 | 61 | 76.92% | 67.03% | 91 | 91 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.644214' Avg. expression score for this sample: '167.83' Avg. expression score in LCM sample: '44.1084' Tissue used: 'full endosperm' |
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| AT1G79110 | BRG2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.02202 x 10-1 | 121 | 80 | 50 | 50 | 60.20% | 50.00% | 201 | 100 | TAIR8 |
Avg. embryo expression (dissected): '841.475' Avg. embryo expression (LCM): '318.096' |
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| AT1G79100 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT1G79100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G79100 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G79100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.799659' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT1G79100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G79100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G79090 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 6 | 1 | 85.71% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79090 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.1904 x 10-2 | 41 | 12 | 17 | 78 | 77.36% | 82.11% | 53 | 95 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.013605' Avg. expression score for this sample: '212.324' Avg. expression score in LCM sample: '191.514' Tissue used: 'full endosperm' |
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| AT1G79090 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 14 | 4 | 6 | 8 | 77.78% | 57.14% | 18 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.013605' Avg. expression score for this sample: '204.769' Avg. expression score in LCM sample: '191.514' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G79090 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.13605 x 10-1 | 13 | 15 | 5 | 3 | 46.43% | 37.50% | 28 | 8 | TAIR8 |
Avg. embryo expression (dissected): '265.55' Avg. embryo expression (LCM): '215.668' |
||||
| AT1G79090 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.39 x 10-4 | 60 | 2 | 96.77% | 62 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79090 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.33102 x 10-1 | 66 | 26 | 71.74% | 92 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.41 x 10-4 | 228 | 56 | 80.28% | 284 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79080 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.61021 x 10-1 | 56 | 34 | 62.22% | 90 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79080 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.5 x 10-28 | 510 | 51 | 90.91% | 561 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.64811 x 10-1 | 285 | 118 | 112 | 186 | 70.72% | 62.42% | 403 | 298 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.080861' Avg. expression score for this sample: '243.215' Avg. expression score in LCM sample: '134.163' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G79080 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.937 x 10-2 | 382 | 116 | 208 | 405 | 76.71% | 66.07% | 498 | 613 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.080861' Avg. expression score for this sample: '280.951' Avg. expression score in LCM sample: '134.163' Tissue used: 'full endosperm' |
|||||
| AT1G79080 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.923 x 10-3 | 641 | 453 | 134 | 108 | 58.59% | 44.63% | 1094 | 242 | TAIR8 |
Avg. embryo expression (dissected): '684.321' Avg. embryo expression (LCM): '473.81' |
||||
| AT1G79075 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1299.06' Avg. embryo expression (LCM): '2154.15' |
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| AT1G79075 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '497.091' Avg. expression score in LCM sample: '229.655' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT1G79075 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G79075 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '750.018' Avg. expression score in LCM sample: '229.655' Tissue used: 'full endosperm' |
|||||||
| AT1G79075 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G79075 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT1G79070 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79070 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 2 | 0 | 100.00% | 0.00% | 1 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '16.9777' Avg. expression score in LCM sample: '1.91073' Tissue used: 'full endosperm' |
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| AT1G79070 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 1 | 1 | 1 | 75.00% | 50.00% | 4 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '11.3966' Avg. expression score in LCM sample: '1.91073' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G79070 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 1 | 1 | 1 | 50.00% | 50.00% | 2 | 2 | TAIR8 |
Avg. embryo expression (dissected): '18.4558' Avg. embryo expression (LCM): '35.8799' |
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| AT1G79070 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.6006 x 10-2 | 11 | 0 | 100.00% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79070 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 1 | 75.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79060 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.71387 x 10-1 | 29 | 17 | 63.04% | 46 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79060 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.6953 x 10-2 | 24 | 5 | 82.76% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79060 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.155 x 10-2 | 17 | 20 | 45.95% | 37 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79060 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.96904 x 10-1 | 66 | 62 | 40 | 116 | 51.56% | 74.36% | 128 | 156 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.67399' Avg. expression score for this sample: '145.269' Avg. expression score in LCM sample: '149.992' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G79060 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 37 | 35 | 21 | 75 | 51.39% | 78.12% | 72 | 96 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.67399' Avg. expression score for this sample: '76.3043' Avg. expression score in LCM sample: '149.992' Tissue used: 'full endosperm' |
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| AT1G79060 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.67033 x 10-1 | 90 | 157 | 42 | 77 | 36.44% | 64.71% | 247 | 119 | TAIR8 |
Avg. embryo expression (dissected): '312.157' Avg. embryo expression (LCM): '337.022' |
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| AT1G79050 | RECA1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '228.45' Avg. embryo expression (LCM): '277.846' |
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| AT1G79050 | RECA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '74.2998' Avg. expression score in LCM sample: '42.0213' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G79050 | RECA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G79050 | RECA1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.44444 x 10-1 | 5 | 0 | 0 | 0 | 100.00% | 5 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '105.976' Avg. expression score in LCM sample: '42.0213' Tissue used: 'full endosperm' |
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| AT1G79050 | RECA1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT1G79050 | RECA1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79040 | PSBR | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79040 | PSBR | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '2636.09' Avg. expression score in LCM sample: '1106.44' Tissue used: 'full endosperm' |
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| AT1G79040 | PSBR | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '3365.54' Avg. expression score in LCM sample: '1106.44' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G79040 | PSBR | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '4469.62' Avg. embryo expression (LCM): '1685.59' |
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| AT1G79040 | PSBR | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79040 | PSBR | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79030 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79030 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79030 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.60895 x 10-1 | 9 | 2 | 81.82% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT1G79030 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.92075 x 10-1 | 2 | 3 | 1 | 1 | 40.00% | 50.00% | 5 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '47.6304' Avg. expression score in LCM sample: '10.9499' Tissue used: 'pure endosperm, no chalazal' |
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| AT1G79030 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.33718 x 10-1 | 5 | 3 | 2 | 11 | 62.50% | 84.62% | 8 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '62.5794' Avg. expression score in LCM sample: '10.9499' Tissue used: 'full endosperm' |
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| AT1G79030 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 2 | 0 | 0 | 66.67% | 6 | 0 | TAIR8 |
Avg. embryo expression (dissected): '128.558' Avg. embryo expression (LCM): '75.678' |
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| AT1G79020 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '28.0911' Avg. embryo expression (LCM): '32.7151' |
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| AT1G79020 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '10.9816' Avg. expression score in LCM sample: '10.1563' Tissue used: 'pure endosperm, no chalazal' |