Displaying data sets 125901 - 126000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G79510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.29365 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 6 1 0 57.14% 0.00% 14 1 TAIR8 Avg. embryo expression (dissected): '23.6587'
Avg. embryo expression (LCM): '35.591'
AT1G79510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.66355 x 10-1 14 6 1 6 70.00% 85.71% 20 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.476715'
Avg. expression score for this sample: '28.7138'
Avg. expression score in LCM sample: '8.92163'
Tissue used: 'pure endosperm, no chalazal'
AT1G79510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.55735 x 10-1 10 5 66.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79505 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 11 5 68.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79505 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 2 1 0 71.43% 0.00% 7 1 TAIR8 Avg. embryo expression (dissected): '8.41481'
Avg. embryo expression (LCM): '11.0767'
AT1G79505 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 2 2 3 66.67% 60.00% 6 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.35992'
Avg. expression score in LCM sample: '2.88079'
Tissue used: 'pure endosperm, no chalazal'
AT1G79505 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.43541 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79505 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 18 6 7 9 75.00% 56.25% 24 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '16.9113'
Avg. expression score in LCM sample: '2.88079'
Tissue used: 'full endosperm'
AT1G79505 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0934 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79500 AtkdsA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3519 x 10-1 17 4 80.95% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79500 AtkdsA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.47527 x 10-1 4 4 5 7 50.00% 58.33% 8 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.576062'
Avg. expression score for this sample: '36.9571'
Avg. expression score in LCM sample: '20.6947'
Tissue used: 'pure endosperm, no chalazal'
AT1G79500 AtkdsA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.346 x 10-3 24 2 92.31% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79500 AtkdsA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.1591 x 10-1 3 16 1 2 15.79% 66.67% 19 3 TAIR8 Avg. embryo expression (dissected): '44.1511'
Avg. embryo expression (LCM): '57.2797'
AT1G79500 AtkdsA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.7707 x 10-1 21 21 12 38 50.00% 76.00% 42 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.576062'
Avg. expression score for this sample: '45.54'
Avg. expression score in LCM sample: '20.6947'
Tissue used: 'full endosperm'
AT1G79500 AtkdsA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.33511 x 10-1 9 3 75.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79490 EMB2217 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.89063 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79490 EMB2217 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 1 7 8 90.91% 53.33% 11 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '21.7527'
Avg. expression score in LCM sample: '9.68593'
Tissue used: 'full endosperm'
AT1G79490 EMB2217 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.9012 x 10-2 18 1 94.74% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79490 EMB2217 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.22393 x 10-1 6 3 3 3 66.67% 50.00% 9 6 TAIR8 Avg. embryo expression (dissected): '32.2283'
Avg. embryo expression (LCM): '39.5218'
AT1G79490 EMB2217 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 2 4 66.67% 66.67% 3 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '14.9421'
Avg. expression score in LCM sample: '9.68593'
Tissue used: 'pure endosperm, no chalazal'
AT1G79490 EMB2217 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6539 x 10-2 27 2 93.10% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.6068 x 10-2 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.340353'
Avg. embryo expression (LCM): '0'
AT1G79480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.85714 x 10-1 1 3 0 0 25.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.751508'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G79480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.07985 x 10-1 0 4 0 13 0.00% 100.00% 4 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.43989'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G79480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.24056 x 10-1 8 6 57.14% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.1 x 10-20 2859 1649 63.42% 4508 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.2392 x 10-2 697 268 277 576 72.23% 67.53% 965 853 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.8e-09'
Avg. expression score for this sample: '381.797'
Avg. expression score in LCM sample: '435.896'
Tissue used: 'pure endosperm, no chalazal'
AT1G79470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1 x 10-18 2527 560 81.86% 3087 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.6 x 10-4 820 593 203 187 58.03% 47.95% 1413 390 TAIR8 Avg. embryo expression (dissected): '577.299'
Avg. embryo expression (LCM): '683.413'
AT1G79470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.4708 x 10-2 83 45 64.84% 128 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.3 x 10-9 574 151 298 829 79.17% 73.56% 725 1127 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.8e-09'
Avg. expression score for this sample: '273.061'
Avg. expression score in LCM sample: '435.896'
Tissue used: 'full endosperm'
AT1G79460 GA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.94451 x 10-1 23 6 16 33 79.31% 67.35% 29 49 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.425376'
Avg. expression score for this sample: '144.459'
Avg. expression score in LCM sample: '32.7176'
Tissue used: 'full endosperm'
AT1G79460 GA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.59706 x 10-1 6 4 60.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79460 GA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.174 x 10-3 46 2 95.83% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79460 GA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 9 8 1 0 52.94% 0.00% 17 1 TAIR8 Avg. embryo expression (dissected): '94.2084'
Avg. embryo expression (LCM): '60.8086'
AT1G79460 GA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.85082 x 10-1 6 2 1 7 75.00% 87.50% 8 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.425376'
Avg. expression score for this sample: '95.2618'
Avg. expression score in LCM sample: '32.7176'
Tissue used: 'pure endosperm, no chalazal'
AT1G79460 GA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.3473 x 10-2 71 12 85.54% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79450 ALIS5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79450 ALIS5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.203734'
Avg. embryo expression (LCM): '0'
AT1G79450 ALIS5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9.41429'
Avg. expression score in LCM sample: '5.15897'
Tissue used: 'pure endosperm, no chalazal'
AT1G79450 ALIS5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79450 ALIS5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.0394'
Avg. expression score in LCM sample: '5.15897'
Tissue used: 'full endosperm'
AT1G79450 ALIS5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79440 ALDH5F1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79440 ALDH5F1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.11232 x 10-1 35 8 22 46 81.40% 67.65% 43 68 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.234638'
Avg. expression score for this sample: '34.3137'
Avg. expression score in LCM sample: '26.9413'
Tissue used: 'pure endosperm, no chalazal'
AT1G79440 ALDH5F1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.65631 x 10-1 17 2 89.47% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79440 ALDH5F1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 27 21 19 12 56.25% 38.71% 48 31 TAIR8 Avg. embryo expression (dissected): '34.9906'
Avg. embryo expression (LCM): '11.2023'
AT1G79440 ALDH5F1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.40952 x 10-1 28 11 4 15 71.79% 78.95% 39 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.234638'
Avg. expression score for this sample: '34.9642'
Avg. expression score in LCM sample: '26.9413'
Tissue used: 'full endosperm'
AT1G79440 ALDH5F1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.7883 x 10-2 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79430 APL endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79430 APL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.04131'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G79430 APL endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79430 APL embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G79430 APL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.85345'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G79430 APL endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Avg. embryo expression (dissected): '90.5645'
Avg. embryo expression (LCM): '38.2157'
AT1G79420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.24536'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G79420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.09'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G79420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79410 OCT5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79410 OCT5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G79410 OCT5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79410 OCT5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G79410 OCT5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79410 OCT5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.40497'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G79400 CHX2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.521762'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G79400 CHX2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79400 CHX2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79400 CHX2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.440697'
Avg. embryo expression (LCM): '0'
AT1G79400 CHX2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.220153'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G79400 CHX2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-18 425 35 92.39% 460 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.56899 x 10-1 66 53 14 12 55.46% 46.15% 119 26 TAIR8 Avg. embryo expression (dissected): '726.564'
Avg. embryo expression (LCM): '556.056'
AT1G79390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.21116 x 10-1 100 34 66 140 74.63% 67.96% 134 206 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.345345'
Avg. expression score for this sample: '345.644'
Avg. expression score in LCM sample: '141.673'
Tissue used: 'full endosperm'
AT1G79390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 27 17 15 39 61.36% 72.22% 44 54 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.345345'
Avg. expression score for this sample: '334.586'
Avg. expression score in LCM sample: '141.673'
Tissue used: 'pure endosperm, no chalazal'
AT1G79390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.33538 x 10-1 17 5 77.27% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.845 x 10-2 239 75 76.11% 314 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79380 RGLG4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.17 x 10-4 41 2 95.35% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79380 RGLG4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.58271 x 10-1 109 22 41 62 83.21% 60.19% 131 103 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.157865'
Avg. expression score for this sample: '93.1721'
Avg. expression score in LCM sample: '13.816'
Tissue used: 'pure endosperm, no chalazal'
AT1G79380 RGLG4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.14215 x 10-1 78 92 67 64 45.88% 48.85% 170 131 TAIR8 Avg. embryo expression (dissected): '169.831'
Avg. embryo expression (LCM): '65.9576'
AT1G79380 RGLG4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.77 x 10-4 88 11 88.89% 99 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79380 RGLG4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.59695 x 10-1 59 37 21 73 61.46% 77.66% 96 94 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.157865'
Avg. expression score for this sample: '87.9433'
Avg. expression score in LCM sample: '13.816'
Tissue used: 'full endosperm'
AT1G79380 RGLG4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.5997 x 10-2 35 6 85.37% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79370 CYP79C1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79370 CYP79C1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 16 49 24.62% 65 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79370 CYP79C1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.204189'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G79370 CYP79C1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT1G79370 CYP79C1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.477407'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G79370 CYP79C1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 39 6 86.67% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79360 OCT2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0275 x 10-2 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79360 OCT2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 6 9 1 3 40.00% 75.00% 15 4 TAIR8 Avg. embryo expression (dissected): '99.6101'
Avg. embryo expression (LCM): '57.0536'
AT1G79360 OCT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.52383 x 10-1 7 6 16 26 53.85% 61.90% 13 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.303432'
Avg. expression score for this sample: '35.5469'
Avg. expression score in LCM sample: '24.7366'
Tissue used: 'full endosperm'
AT1G79360 OCT2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.28424 x 10-1 0 7 2 8 0.00% 80.00% 7 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.303432'
Avg. expression score for this sample: '56.4539'
Avg. expression score in LCM sample: '24.7366'
Tissue used: 'pure endosperm, no chalazal'
AT1G79360 OCT2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.62703 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79360 OCT2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.11255 x 10-1 7 3 70.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'