| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G160687 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | MEG | 2.73 x 10-6 | 22 | 0 | 2 | 29 | 100.00% | 93.55% | 22 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.73e-06' χ2 p-value for Mo17 x B73: '1.24e-06' Biased in favor of strain: '' |
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| GRMZM2G160687 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | MEG | 1.94 x 10-6 | 107 | 0 | 3 | 59 | 100.00% | 95.16% | 107 | 62 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.59e-13' χ2 p-value for Mo17 x B73: '1.94e-06' Biased in favor of strain: '' |
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| GRMZM2G160685 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 52 | 0 | 0 | 1 | 100.00% | 100.00% | 52 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.41e-07' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G160685 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 0 | 0 | 100.00% | 9 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G160683 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 5 | 1 | 100.00% | 16.67% | 5 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: '' |
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| GRMZM2G160683 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.14468 x 10-2 | 47 | 10 | 43 | 15 | 82.46% | 25.86% | 57 | 58 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0114468' χ2 p-value for Mo17 x B73: '4.33e-11' Biased in favor of strain: '' |
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| GRMZM2G160611 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.0548 x 10-3 | 19 | 0 | 10 | 3 | 100.00% | 23.08% | 19 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0020548' χ2 p-value for Mo17 x B73: '.0008561' Biased in favor of strain: 'B73' |
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| GRMZM2G160611 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 0 | 5 | 3 | 100.00% | 37.50% | 9 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G160585 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.46539 x 10-2 | 134 | 87 | 134 | 108 | 60.63% | 44.63% | 221 | 242 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015693' χ2 p-value for Mo17 x B73: '.0946539' Biased in favor of strain: '' |
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| GRMZM2G160585 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.197947 x 10-1 | 132 | 65 | 82 | 156 | 67.01% | 65.55% | 197 | 238 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9197947' χ2 p-value for Mo17 x B73: '.7138576' Biased in favor of strain: '' |
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| GRMZM2G160563 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 0 | 3 | 83.33% | 100.00% | 6 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| GRMZM2G160563 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 4 | 1 | 1 | 42.86% | 50.00% | 7 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.705457' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G160560 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.789924 x 10-1 | 28 | 39 | 49 | 36 | 41.79% | 42.35% | 67 | 85 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1789924' χ2 p-value for Mo17 x B73: '.1585255' Biased in favor of strain: '' |
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| GRMZM2G160560 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 29 | 1 | 5 | 3 | 96.67% | 37.50% | 30 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004909' χ2 p-value for Mo17 x B73: '.0801183' Biased in favor of strain: '' |
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| GRMZM2G160556 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.88323 x 10-1 | 14 | 2 | 17 | 26 | 87.50% | 60.47% | 16 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0771021' χ2 p-value for Mo17 x B73: '.388323' Biased in favor of strain: '' |
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| GRMZM2G160556 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 4 | 14 | 11 | 11 | 22.22% | 50.00% | 18 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0184221' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G160541 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.2576 x 10-3 | 19 | 40 | 20 | 63 | 32.20% | 75.90% | 59 | 83 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0062576' χ2 p-value for Mo17 x B73: '2.36e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G160541 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.32 x 10-7 | 10 | 28 | 13 | 242 | 26.32% | 94.90% | 38 | 255 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.32e-07' χ2 p-value for Mo17 x B73: '1.13e-21' Biased in favor of strain: 'Mo17' |
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| GRMZM2G160527 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 2.28 x 10-5 | 45 | 52 | 103 | 101 | 46.39% | 49.51% | 97 | 204 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000228' χ2 p-value for Mo17 x B73: '2.01e-07' Biased in favor of strain: '' |
||||
| GRMZM2G160527 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.138077 x 10-1 | 102 | 85 | 124 | 99 | 54.55% | 44.39% | 187 | 223 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2138077' χ2 p-value for Mo17 x B73: '.0941063' Biased in favor of strain: '' |
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| GRMZM2G160517 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 6 | 100.00% | 75.00% | 1 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G160517 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 2 | 50.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G160506 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 7432 | 2524 | 4123 | 5325 | 74.65% | 56.36% | 9956 | 9448 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G160506 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.97 x 10-19 | 2473 | 1025 | 1754 | 1267 | 70.70% | 41.94% | 3498 | 3021 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '7.97e-19' Biased in favor of strain: 'B73' |
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| GRMZM2G160504 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.572992 x 10-1 | 10 | 20 | 30 | 20 | 33.33% | 40.00% | 30 | 50 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0678892' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G160504 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.638321 x 10-1 | 12 | 20 | 22 | 46 | 37.50% | 67.65% | 32 | 68 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004652' χ2 p-value for Mo17 x B73: '.8638321' Biased in favor of strain: '' |
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| GRMZM2G160463 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 805 | 98 | 494 | 221 | 89.15% | 30.91% | 903 | 715 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G160463 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 365 | 65 | 334 | 48 | 84.88% | 12.57% | 430 | 382 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G160460 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.93464 x 10-2 | 18 | 5 | 13 | 5 | 78.26% | 27.78% | 23 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0067144' χ2 p-value for Mo17 x B73: '.0593464' Biased in favor of strain: '' |
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| GRMZM2G160460 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.574913 x 10-1 | 42 | 20 | 13 | 53 | 67.74% | 80.30% | 62 | 66 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8574913' χ2 p-value for Mo17 x B73: '.018771' Biased in favor of strain: '' |
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| GRMZM2G160452 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.829517 x 10-1 | 685 | 531 | 394 | 815 | 56.33% | 67.41% | 1216 | 1209 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.09e-14' χ2 p-value for Mo17 x B73: '.5829517' Biased in favor of strain: '' |
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| GRMZM2G160452 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.13 x 10-6 | 338 | 473 | 282 | 511 | 41.68% | 64.44% | 811 | 793 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.13e-06' χ2 p-value for Mo17 x B73: '4.22e-16' Biased in favor of strain: 'Mo17' |
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| GRMZM2G160444 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2953 | 1367 | 2619 | 1387 | 68.36% | 34.62% | 4320 | 4006 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G160444 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 3815 | 1083 | 2310 | 2756 | 77.89% | 54.40% | 4898 | 5066 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G160430 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.396408 x 10-1 | 18 | 15 | 19 | 58 | 54.55% | 75.32% | 33 | 77 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1396408' χ2 p-value for Mo17 x B73: '.1070391' Biased in favor of strain: '' |
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| GRMZM2G160430 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.44127 x 10-1 | 17 | 5 | 19 | 11 | 77.27% | 36.67% | 22 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0105152' χ2 p-value for Mo17 x B73: '.144127' Biased in favor of strain: '' |
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| GRMZM2G160428 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.68812 x 10-2 | 184 | 113 | 121 | 95 | 61.95% | 43.98% | 297 | 216 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000379' χ2 p-value for Mo17 x B73: '.0768812' Biased in favor of strain: '' |
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| GRMZM2G160428 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.45261 x 10-2 | 111 | 72 | 107 | 150 | 60.66% | 58.37% | 183 | 257 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0845261' χ2 p-value for Mo17 x B73: '.0047588' Biased in favor of strain: '' |
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| GRMZM2G160417 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.433094 x 10-1 | 170 | 69 | 87 | 100 | 71.13% | 53.48% | 239 | 187 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1433094' χ2 p-value for Mo17 x B73: '.00013' Biased in favor of strain: '' |
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| GRMZM2G160417 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 x 10-30 | 563 | 198 | 590 | 254 | 73.98% | 30.09% | 761 | 844 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '6.16e-31' Biased in favor of strain: 'B73' |
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| GRMZM2G160370 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.735811 x 10-1 | 112 | 96 | 80 | 78 | 53.85% | 49.37% | 208 | 158 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2672575' χ2 p-value for Mo17 x B73: '.8735811' Biased in favor of strain: '' |
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| GRMZM2G160370 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.723374 x 10-1 | 89 | 48 | 52 | 115 | 64.96% | 68.86% | 137 | 167 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6723374' χ2 p-value for Mo17 x B73: '.5472456' Biased in favor of strain: '' |
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| GRMZM2G160364 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 12 | 2 | 3 | 25.00% | 60.00% | 16 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004069' χ2 p-value for Mo17 x B73: '.7518296' Biased in favor of strain: '' |
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| GRMZM2G160364 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.802 x 10-4 | 241 | 133 | 238 | 163 | 64.44% | 40.65% | 374 | 401 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.34e-08' χ2 p-value for Mo17 x B73: '.0001802' Biased in favor of strain: 'B73' |
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| GRMZM2G160351 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.912971 x 10-1 | 8 | 11 | 9 | 18 | 42.11% | 66.67% | 19 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4912971' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G160351 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.447117 x 10-1 | 11 | 3 | 10 | 11 | 78.57% | 52.38% | 14 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3447117' χ2 p-value for Mo17 x B73: '.1649147' Biased in favor of strain: '' |
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| GRMZM2G160327 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G160327 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.2979 x 10-2 | 140 | 92 | 174 | 141 | 60.34% | 44.76% | 232 | 315 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0016252' χ2 p-value for Mo17 x B73: '.062979' Biased in favor of strain: '' |
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| GRMZM2G160325 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 9 | 9 | 10 | 5 | 50.00% | 33.33% | 18 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1967056' Biased in favor of strain: '' |
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| GRMZM2G160325 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 1 | 0 | 0.00% | 0.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G160324 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 765 | 134 | 469 | 201 | 85.09% | 30.00% | 899 | 670 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.97e-32' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G160324 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 560 | 130 | 441 | 138 | 81.16% | 23.83% | 690 | 579 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.33e-36' Biased in favor of strain: 'B73' |
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| GRMZM2G160316 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.457786 x 10-1 | 7 | 11 | 6 | 12 | 38.89% | 66.67% | 18 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3457786' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G160316 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 4 | 6 | 8 | 33.33% | 57.14% | 6 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832614' χ2 p-value for Mo17 x B73: '.4496917' Biased in favor of strain: '' |
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| GRMZM2G160304 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.059031 x 10-1 | 31 | 6 | 19 | 26 | 83.78% | 57.78% | 37 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0271967' χ2 p-value for Mo17 x B73: '.2059031' Biased in favor of strain: '' |
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| GRMZM2G160304 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.1 x 10-6 | 54 | 15 | 64 | 21 | 78.26% | 24.71% | 69 | 85 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.67e-06' χ2 p-value for Mo17 x B73: '3.10e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G160279 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5047 x 10-3 | 95 | 56 | 172 | 83 | 62.91% | 32.55% | 151 | 255 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015047' χ2 p-value for Mo17 x B73: '2.50e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G160279 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.155116 x 10-1 | 241 | 153 | 192 | 333 | 61.17% | 63.43% | 394 | 525 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0205784' χ2 p-value for Mo17 x B73: '.1155116' Biased in favor of strain: '' |
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| GRMZM2G160273 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.347953 x 10-1 | 210 | 217 | 166 | 192 | 49.18% | 53.63% | 427 | 358 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7347953' χ2 p-value for Mo17 x B73: '.1693974' Biased in favor of strain: '' |
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| GRMZM2G160273 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.708322 x 10-1 | 162 | 123 | 125 | 249 | 56.84% | 66.58% | 285 | 374 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004341' χ2 p-value for Mo17 x B73: '.9708322' Biased in favor of strain: '' |
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| GRMZM2G160237 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.91 x 10-22 | 5554 | 2177 | 2933 | 4224 | 71.84% | 59.02% | 7731 | 7157 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.91e-22' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G160237 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.249743 x 10-1 | 949 | 445 | 578 | 527 | 68.08% | 47.69% | 1394 | 1105 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.1249743' Biased in favor of strain: '' |
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| GRMZM2G160211 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G160211 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 3 | 0 | 100.00% | 0.00% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G160198 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 0 | 0 | 0 | 100.00% | 10 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G160198 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.32 x 10-4 | 12 | 0 | 20 | 0 | 100.00% | 0.00% | 12 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '7.74e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G160174 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 3 | 0 | 5 | 57.14% | 100.00% | 7 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.705457' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM2G160174 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.767473 x 10-1 | 9 | 7 | 0 | 10 | 56.25% | 100.00% | 16 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3767473' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM2G160149 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.20908 x 10-2 | 39 | 9 | 30 | 31 | 81.25% | 50.82% | 48 | 61 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0320908' χ2 p-value for Mo17 x B73: '.0086512' Biased in favor of strain: '' |
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| GRMZM2G160149 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.967175 x 10-1 | 26 | 19 | 15 | 24 | 57.78% | 61.54% | 45 | 39 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2967175' χ2 p-value for Mo17 x B73: '.1495413' Biased in favor of strain: '' |
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| GRMZM2G160069 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.14 x 10-5 | 20 | 59 | 12 | 73 | 25.32% | 85.88% | 79 | 85 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000114' χ2 p-value for Mo17 x B73: '3.68e-11' Biased in favor of strain: 'Mo17' |
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| GRMZM2G160069 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.316724 x 10-1 | 18 | 4 | 24 | 20 | 81.82% | 45.45% | 22 | 44 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1316724' χ2 p-value for Mo17 x B73: '.0028375' Biased in favor of strain: '' |
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| GRMZM2G160064 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.929803 x 10-1 | 2 | 10 | 8 | 20 | 16.67% | 71.43% | 12 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002385' χ2 p-value for Mo17 x B73: '.5929803' Biased in favor of strain: '' |
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| GRMZM2G160064 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 108 | 108 | 152 | 228 | 50.00% | 60.00% | 216 | 380 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0000967' Biased in favor of strain: '' |
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| GRMZM2G160041 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.716076 x 10-1 | 27 | 23 | 28 | 18 | 54.00% | 39.13% | 50 | 46 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5716076' χ2 p-value for Mo17 x B73: '.1403687' Biased in favor of strain: '' |
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| GRMZM2G160041 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.151714 x 10-1 | 41 | 14 | 18 | 16 | 74.55% | 47.06% | 55 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2151714' χ2 p-value for Mo17 x B73: '.0152934' Biased in favor of strain: '' |
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| GRMZM2G160032 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1368 | 303 | 673 | 539 | 81.87% | 44.47% | 1671 | 1212 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G160032 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.4 x 10-29 | 1305 | 642 | 1248 | 747 | 67.03% | 37.44% | 1947 | 1995 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '3.38e-29' Biased in favor of strain: 'B73' |
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| GRMZM2G160027 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.2635 x 10-3 | 7 | 24 | 3 | 26 | 22.58% | 89.66% | 31 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0022635' χ2 p-value for Mo17 x B73: '.0000195' Biased in favor of strain: 'Mo17' |
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| GRMZM2G160027 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.4 x 10-8 | 1 | 71 | 1 | 64 | 1.39% | 98.46% | 72 | 65 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.06e-32' χ2 p-value for Mo17 x B73: '5.40e-08' Biased in favor of strain: 'Mo17' |
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| GRMZM2G160013 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 3 | 8 | 2 | 50.00% | 20.00% | 6 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3864683' χ2 p-value for Mo17 x B73: '.0017451' Biased in favor of strain: '' |
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| GRMZM2G160013 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.457 x 10-4 | 259 | 182 | 284 | 169 | 58.73% | 37.31% | 441 | 453 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002457' χ2 p-value for Mo17 x B73: '6.55e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G159996 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.386848 x 10-1 | 84 | 85 | 153 | 93 | 49.70% | 37.80% | 169 | 246 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9386848' χ2 p-value for Mo17 x B73: '.0001305' Biased in favor of strain: '' |
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| GRMZM2G159996 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.711473 x 10-1 | 13 | 6 | 18 | 20 | 68.42% | 52.63% | 19 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8711473' χ2 p-value for Mo17 x B73: '.0664574' Biased in favor of strain: '' |
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| GRMZM2G159992 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.656578 x 10-1 | 177 | 73 | 152 | 149 | 70.80% | 49.50% | 250 | 301 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1656578' χ2 p-value for Mo17 x B73: '2.66e-10' Biased in favor of strain: '' |
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| GRMZM2G159992 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.679376 x 10-1 | 224 | 212 | 191 | 180 | 51.38% | 48.52% | 436 | 371 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.565497' χ2 p-value for Mo17 x B73: '.5679376' Biased in favor of strain: '' |
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| GRMZM2G159977 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.57 x 10-6 | 3 | 31 | 3 | 92 | 8.82% | 96.84% | 34 | 95 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.57e-06' χ2 p-value for Mo17 x B73: '6.77e-20' Biased in favor of strain: 'Mo17' |
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| GRMZM2G159977 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G159956 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2047 | 469 | 1666 | 856 | 81.36% | 33.94% | 2516 | 2522 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G159956 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1810 | 671 | 1325 | 614 | 72.95% | 31.67% | 2481 | 1939 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G159953 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.993686 x 10-1 | 196 | 191 | 181 | 230 | 50.65% | 55.96% | 387 | 411 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7993686' χ2 p-value for Mo17 x B73: '.0156494' Biased in favor of strain: '' |
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| GRMZM2G159953 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 1 | 16 | 83.33% | 94.12% | 6 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.0163512' Biased in favor of strain: '' |
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| GRMZM2G159948 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.32 x 10-10 | 392 | 100 | 362 | 217 | 79.67% | 37.48% | 492 | 579 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.32e-10' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G159948 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 524 | 162 | 633 | 123 | 76.38% | 16.27% | 686 | 756 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G159937 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.43059 x 10-2 | 77 | 48 | 36 | 18 | 61.60% | 33.33% | 125 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0094911' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: 'B73' |
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| GRMZM2G159937 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.994744 x 10-1 | 20 | 11 | 23 | 28 | 64.52% | 54.90% | 31 | 51 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7994744' χ2 p-value for Mo17 x B73: '.0747059' Biased in favor of strain: '' |
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| GRMZM2G159926 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.68576 x 10-2 | 18 | 2 | 21 | 1 | 90.00% | 4.55% | 20 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0268576' χ2 p-value for Mo17 x B73: '6.37e-10' Biased in favor of strain: '' |
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| GRMZM2G159926 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.363894 x 10-1 | 79 | 78 | 76 | 89 | 50.32% | 53.94% | 157 | 165 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9363894' χ2 p-value for Mo17 x B73: '.3115148' Biased in favor of strain: '' |
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| GRMZM2G159924 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.967175 x 10-1 | 53 | 22 | 26 | 19 | 70.67% | 42.22% | 75 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003442' χ2 p-value for Mo17 x B73: '.2967175' Biased in favor of strain: '' |
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| GRMZM2G159924 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.609673 x 10-1 | 20 | 16 | 10 | 33 | 55.56% | 76.74% | 36 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572895' χ2 p-value for Mo17 x B73: '.1609673' Biased in favor of strain: '' |