Displaying data sets 125801 - 125900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G79670 RFO1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '16.7066'
Avg. embryo expression (LCM): '16.5522'
AT1G79670 RFO1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '72.2355'
Avg. expression score in LCM sample: '9.78881'
Tissue used: 'full endosperm'
AT1G79660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '35.0041'
Avg. embryo expression (LCM): '14.6307'
AT1G79660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '40.9193'
Avg. expression score in LCM sample: '9.78881'
Tissue used: 'pure endosperm, no chalazal'
AT1G79650 RAD23B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '120.314'
Avg. expression score in LCM sample: '69.624'
Tissue used: 'pure endosperm, no chalazal'
AT1G79650 RAD23B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79650 RAD23B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79650 RAD23B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '88.4273'
Avg. embryo expression (LCM): '150.766'
AT1G79650 RAD23B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79650 RAD23B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '103.946'
Avg. expression score in LCM sample: '69.624'
Tissue used: 'full endosperm'
AT1G79640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '16.9679'
Avg. expression score in LCM sample: '24.5602'
Tissue used: 'full endosperm'
AT1G79640 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.1117'
Avg. embryo expression (LCM): '2.47404'
AT1G79640 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79640 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79640 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '18.9452'
Avg. expression score in LCM sample: '24.5602'
Tissue used: 'pure endosperm, no chalazal'
AT1G79630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '178.295'
Avg. expression score in LCM sample: '63.1422'
Tissue used: 'pure endosperm, no chalazal'
AT1G79630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '148.639'
Avg. expression score in LCM sample: '63.1422'
Tissue used: 'full endosperm'
AT1G79630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '70.0546'
Avg. embryo expression (LCM): '60.2184'
AT1G79620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.468411'
Avg. embryo expression (LCM): '1.21818'
AT1G79620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '1.54516'
Avg. expression score in LCM sample: '.470333'
Tissue used: 'full endosperm'
AT1G79620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '.749949'
Avg. expression score in LCM sample: '.470333'
Tissue used: 'pure endosperm, no chalazal'
AT1G79610 NHX6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.87086 x 10-1 28 22 17 55 56.00% 76.39% 50 72 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.7e-07'
Avg. expression score for this sample: '236.799'
Avg. expression score in LCM sample: '80.3388'
Tissue used: 'pure endosperm, no chalazal'
AT1G79610 NHX6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.7 x 10-23 540 25 95.58% 565 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79610 NHX6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.33063 x 10-1 25 9 73.53% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79610 NHX6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.5 x 10-8 236 67 93 379 77.89% 80.30% 303 472 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.7e-07'
Avg. expression score for this sample: '349.821'
Avg. expression score in LCM sample: '80.3388'
Tissue used: 'full endosperm'
AT1G79610 NHX6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 15 16 3 5 48.39% 62.50% 31 8 TAIR8 Avg. embryo expression (dissected): '107.381'
Avg. embryo expression (LCM): '88.9147'
AT1G79610 NHX6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.8 x 10-12 322 23 93.33% 345 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '106.846'
Avg. expression score in LCM sample: '95.1837'
Tissue used: 'full endosperm'
AT1G79600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '73.6009'
Avg. embryo expression (LCM): '50.0083'
AT1G79600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '91.0644'
Avg. expression score in LCM sample: '95.1837'
Tissue used: 'pure endosperm, no chalazal'
AT1G79590 SYP52 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '173.141'
Avg. expression score in LCM sample: '128.43'
Tissue used: 'pure endosperm, no chalazal'
AT1G79590 SYP52 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.64286 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79590 SYP52 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79590 SYP52 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '86.8406'
Avg. embryo expression (LCM): '80.9149'
AT1G79590 SYP52 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79590 SYP52 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 1 100.00% 50.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '144.961'
Avg. expression score in LCM sample: '128.43'
Tissue used: 'full endosperm'
AT1G79580 SMB endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.9533 x 10-2 0 9 0 3 0.00% 100.00% 9 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.03365'
Avg. expression score for this sample: '4.68605'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G79580 SMB embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.63858 x 10-1 14 20 16 18 41.18% 52.94% 34 34 TAIR8 Avg. embryo expression (dissected): '60.7124'
Avg. embryo expression (LCM): '19.7044'
AT1G79580 SMB endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79580 SMB endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.48 x 10-4 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79580 SMB endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.34348 x 10-1 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79580 SMB endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.6985 x 10-1 4 4 2 0 50.00% 0.00% 8 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.03365'
Avg. expression score for this sample: '4.71661'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G79570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '68.5382'
Avg. expression score in LCM sample: '61.158'
Tissue used: 'pure endosperm, no chalazal'
AT1G79570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '101.194'
Avg. expression score in LCM sample: '61.158'
Tissue used: 'full endosperm'
AT1G79570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '94.5068'
Avg. embryo expression (LCM): '53.713'
AT1G79560 FTSH12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '314.796'
Avg. embryo expression (LCM): '298.844'
AT1G79560 FTSH12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79560 FTSH12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '59.8571'
Avg. expression score in LCM sample: '33.4965'
Tissue used: 'full endosperm'
AT1G79560 FTSH12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79560 FTSH12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79560 FTSH12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '67.0464'
Avg. expression score in LCM sample: '33.4965'
Tissue used: 'pure endosperm, no chalazal'
AT1G79550 PGK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '618.97'
Avg. expression score in LCM sample: '542.706'
Tissue used: 'pure endosperm, no chalazal'
AT1G79550 PGK endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79550 PGK endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79550 PGK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '460.296'
Avg. expression score in LCM sample: '542.706'
Tissue used: 'full endosperm'
AT1G79550 PGK embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '782.086'
Avg. embryo expression (LCM): '789.143'
AT1G79550 PGK endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.49651 x 10-1 65 18 78.31% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.40952 x 10-1 18 8 7 25 69.23% 78.12% 26 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.213375'
Avg. expression score for this sample: '79.922'
Avg. expression score in LCM sample: '41.9478'
Tissue used: 'full endosperm'
AT1G79540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 11 4 8 38.89% 66.67% 18 12 TAIR8 Avg. embryo expression (dissected): '102.948'
Avg. embryo expression (LCM): '96.3871'
AT1G79540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.2829 x 10-2 37 4 90.24% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.38433 x 10-1 9 2 1 5 81.82% 83.33% 11 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.213375'
Avg. expression score for this sample: '53.2911'
Avg. expression score in LCM sample: '41.9478'
Tissue used: 'pure endosperm, no chalazal'
AT1G79530 GAPCP-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.3292 x 10-2 58 14 15 37 80.56% 71.15% 72 52 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.007722'
Avg. expression score for this sample: '66.3169'
Avg. expression score in LCM sample: '50.1934'
Tissue used: 'pure endosperm, no chalazal'
AT1G79530 GAPCP-1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1 x 10-9 137 2 98.56% 139 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79530 GAPCP-1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.289 x 10-2 17 13 56.67% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79530 GAPCP-1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.9077 x 10-2 105 72 26 32 59.32% 55.17% 177 58 TAIR8 Avg. embryo expression (dissected): '221.399'
Avg. embryo expression (LCM): '364.538'
AT1G79530 GAPCP-1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.1805 x 10-2 40 4 90.91% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79530 GAPCP-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.4873 x 10-2 47 9 10 32 83.93% 76.19% 56 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.007722'
Avg. expression score for this sample: '60.7362'
Avg. expression score in LCM sample: '50.1934'
Tissue used: 'full endosperm'
AT1G79529 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.38433 x 10-1 3 2 1 11 60.00% 91.67% 5 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '27.6403'
Avg. expression score in LCM sample: '8.74526'
Tissue used: 'full endosperm'
AT1G79529 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.77512 x 10-1 1 13 1 10 7.14% 90.91% 14 11 TAIR8 Avg. embryo expression (dissected): '93.8283'
Avg. embryo expression (LCM): '130.823'
AT1G79529 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.3796 x 10-2 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79529 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79529 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.415 x 10-3 7 16 30.43% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79529 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 6 0 6 25.00% 100.00% 8 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '35.36'
Avg. expression score in LCM sample: '8.74526'
Tissue used: 'pure endosperm, no chalazal'
AT1G79520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 2.29888 x 10-1 9 5 0 15 64.29% 100.00% 14 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.5e-07'
Avg. expression score for this sample: '22.5799'
Avg. expression score in LCM sample: '23.8253'
Tissue used: 'pure endosperm, no chalazal'
AT1G79520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.17566 x 10-1 38 0 100.00% 38 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT1G79520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.03215 x 10-1 18 0 100.00% 18 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT1G79520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.0919 x 10-2 25 6 80.65% 31 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT1G79520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 1.6 x 10-7 49 4 0 42 92.45% 100.00% 53 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.5e-07'
Avg. expression score for this sample: '47.6249'
Avg. expression score in LCM sample: '23.8253'
Tissue used: 'full endosperm'
AT1G79520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Avg. embryo expression (dissected): '6.15374'
Avg. embryo expression (LCM): '1.77076'
AT1G79510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 6 1 0 57.14% 0.00% 14 1 TAIR8 Avg. embryo expression (dissected): '23.6587'
Avg. embryo expression (LCM): '35.591'
AT1G79510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.29365 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'