Displaying data sets 125601 - 125700 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT1G79980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G79980 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79980 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79975 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79975 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '347.38'
Avg. expression score in LCM sample: '192.587'
Tissue used: 'full endosperm'
AT1G79975 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '548.835'
Avg. embryo expression (LCM): '212.541'
AT1G79975 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '672.053'
Avg. expression score in LCM sample: '192.587'
Tissue used: 'pure endosperm, no chalazal'
AT1G79975 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79975 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.45098 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.45098 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '109.638'
Avg. expression score in LCM sample: '31.042'
Tissue used: 'pure endosperm, no chalazal'
AT1G79970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 2 1 5 60.00% 83.33% 5 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '148.714'
Avg. expression score in LCM sample: '31.042'
Tissue used: 'full endosperm'
AT1G79970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '142.703'
Avg. embryo expression (LCM): '166.69'
AT1G79960 OFP14 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '30.2233'
Avg. embryo expression (LCM): '18.4737'
AT1G79960 OFP14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '19.6146'
Avg. expression score in LCM sample: '14.9625'
Tissue used: 'pure endosperm, no chalazal'
AT1G79960 OFP14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '20.5988'
Avg. expression score in LCM sample: '14.9625'
Tissue used: 'full endosperm'
AT1G79960 OFP14 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.85714 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79960 OFP14 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.45455 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79960 OFP14 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79950 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.92939 x 10-1 107 48 69.03% 155 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.133 x 10-2 670 235 380 755 74.03% 66.52% 905 1135 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.342257'
Avg. expression score for this sample: '271.849'
Avg. expression score in LCM sample: '108.03'
Tissue used: 'full endosperm'
AT1G79950 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.17413 x 10-1 646 574 259 195 52.95% 42.95% 1220 454 TAIR8 Avg. embryo expression (dissected): '507.121'
Avg. embryo expression (LCM): '311.742'
AT1G79950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.40468 x 10-1 751 278 407 546 72.98% 57.29% 1029 953 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.342257'
Avg. expression score for this sample: '337.242'
Avg. expression score in LCM sample: '108.03'
Tissue used: 'pure endosperm, no chalazal'
AT1G79950 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1079 187 85.23% 1266 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79950 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.867 x 10-3 759 285 72.70% 1044 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79940 ATERDJ2A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4468 x 10-2 1283 427 75.03% 1710 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79940 ATERDJ2A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1775 159 91.78% 1934 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79940 ATERDJ2A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.9009 x 10-1 119 41 74.38% 160 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79940 ATERDJ2A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.239 x 10-2 751 323 349 809 69.93% 69.86% 1074 1158 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.7e-08'
Avg. expression score for this sample: '3314.73'
Avg. expression score in LCM sample: '725.959'
Tissue used: 'pure endosperm, no chalazal'
AT1G79940 ATERDJ2A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.1 x 10-8 695 255 284 883 73.16% 75.66% 950 1167 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.7e-08'
Avg. expression score for this sample: '1710.68'
Avg. expression score in LCM sample: '725.959'
Tissue used: 'full endosperm'
AT1G79940 ATERDJ2A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.02627 x 10-1 355 341 148 193 51.01% 56.60% 696 341 TAIR8 Avg. embryo expression (dissected): '2278.59'
Avg. embryo expression (LCM): '845.607'
AT1G79930 HSP91 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.681 x 10-3 615 441 166 137 58.24% 45.21% 1056 303 TAIR8 Avg. embryo expression (dissected): '685.738'
Avg. embryo expression (LCM): '536.904'
AT1G79930 HSP91 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.0862 x 10-2 551 199 246 520 73.47% 67.89% 750 766 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000014'
Avg. expression score for this sample: '566.491'
Avg. expression score in LCM sample: '394.639'
Tissue used: 'pure endosperm, no chalazal'
AT1G79930 HSP91 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.06 x 10-4 645 184 329 695 77.80% 67.87% 829 1024 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000014'
Avg. expression score for this sample: '406.619'
Avg. expression score in LCM sample: '394.639'
Tissue used: 'full endosperm'
AT1G79930 HSP91 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.7 x 10-27 1760 333 84.09% 2093 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79930 HSP91 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.083 x 10-3 1711 820 67.60% 2531 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79930 HSP91 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.693 x 10-3 194 46 80.83% 240 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79920 Hsp70-15 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.83 x 10-4 237 155 60.46% 392 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79920 Hsp70-15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.5 x 10-9 1888 238 689 625 88.81% 47.56% 2126 1314 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000183'
Avg. expression score for this sample: '1498.63'
Avg. expression score in LCM sample: '432.031'
Tissue used: 'full endosperm'
AT1G79920 Hsp70-15 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.4 x 10-29 2164 773 682 279 73.68% 29.03% 2937 961 TAIR8 Avg. embryo expression (dissected): '2315.78'
Avg. embryo expression (LCM): '1070.43'
AT1G79920 Hsp70-15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.76344 x 10-1 2424 394 1416 1239 86.02% 46.67% 2818 2655 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000183'
Avg. expression score for this sample: '1887.66'
Avg. expression score in LCM sample: '432.031'
Tissue used: 'pure endosperm, no chalazal'
AT1G79920 Hsp70-15 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 519 598 46.46% 1117 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79920 Hsp70-15 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1911 136 93.36% 2047 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79915 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79915 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79915 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79915 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.77784'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT1G79915 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 2 1 0 60.00% 0.00% 5 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '17.4064'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT1G79915 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28571 x 10-1 0 2 1 0 0.00% 0.00% 2 1 TAIR8 Avg. embryo expression (dissected): '19.4824'
Avg. embryo expression (LCM): '0'
AT1G79910 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '41.8434'
Avg. embryo expression (LCM): '1.72053'
AT1G79910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '19.5838'
Avg. expression score in LCM sample: '16.0648'
Tissue used: 'pure endosperm, no chalazal'
AT1G79910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 2 0 1 50.00% 100.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '23.9231'
Avg. expression score in LCM sample: '16.0648'
Tissue used: 'full endosperm'
AT1G79910 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79910 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79910 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79900 BAC2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.67682 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79900 BAC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.6048 x 10-2 7 3 2 21 70.00% 91.30% 10 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.32996'
Avg. expression score for this sample: '32.5336'
Avg. expression score in LCM sample: '4.04193'
Tissue used: 'full endosperm'
AT1G79900 BAC2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 4 2 0 2 66.67% 100.00% 6 2 TAIR8 Avg. embryo expression (dissected): '11.4917'
Avg. embryo expression (LCM): '11.2399'
AT1G79900 BAC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 2 2 4 50.00% 66.67% 4 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.32996'
Avg. expression score for this sample: '17.2417'
Avg. expression score in LCM sample: '4.04193'
Tissue used: 'pure endosperm, no chalazal'
AT1G79900 BAC2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 29 8 78.38% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79900 BAC2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 27 7 79.41% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79890 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.00662 x 10-1 62 39 61.39% 101 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79890 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.8146 x 10-2 39 6 86.67% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79890 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.00514 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 11 3 8 8 78.57% 50.00% 14 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.763386'
Avg. expression score for this sample: '41.4022'
Avg. expression score in LCM sample: '21.7088'
Tissue used: 'pure endosperm, no chalazal'
AT1G79890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.86439 x 10-1 28 8 12 23 77.78% 65.71% 36 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.763386'
Avg. expression score for this sample: '35.1611'
Avg. expression score in LCM sample: '21.7088'
Tissue used: 'full endosperm'
AT1G79890 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.18245 x 10-1 15 7 3 3 68.18% 50.00% 22 6 TAIR8 Avg. embryo expression (dissected): '58.6036'
Avg. embryo expression (LCM): '42.8122'
AT1G79880 La2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 2 1 0 66.67% 0.00% 6 1 TAIR8 Avg. embryo expression (dissected): '57.2816'
Avg. embryo expression (LCM): '57.2797'
AT1G79880 La2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 2 1 100.00% 33.33% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.507678'
Avg. expression score for this sample: '53.6469'
Avg. expression score in LCM sample: '18.5635'
Tissue used: 'pure endosperm, no chalazal'
AT1G79880 La2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.13649 x 10-1 2 1 6 3 66.67% 33.33% 3 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.507678'
Avg. expression score for this sample: '80.6822'
Avg. expression score in LCM sample: '18.5635'
Tissue used: 'full endosperm'
AT1G79880 La2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4026 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79880 La2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.44862 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79880 La2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79870 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.8 x 10-7 208 32 86.67% 240 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.11 x 10-3 207 88 79 270 70.17% 77.36% 295 349 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001026'
Avg. expression score for this sample: '339.717'
Avg. expression score in LCM sample: '388.907'
Tissue used: 'full endosperm'
AT1G79870 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.21472 x 10-1 365 419 73 97 46.56% 57.06% 784 170 TAIR8 Avg. embryo expression (dissected): '560.164'
Avg. embryo expression (LCM): '387.332'
AT1G79870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.4201 x 10-2 410 219 172 518 65.18% 75.07% 629 690 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001026'
Avg. expression score for this sample: '538.135'
Avg. expression score in LCM sample: '388.907'
Tissue used: 'pure endosperm, no chalazal'
AT1G79870 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1 x 10-9 405 73 84.73% 478 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79870 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.3 x 10-7 326 64 83.59% 390 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79860 ROPGEF12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79860 ROPGEF12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79860 ROPGEF12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79860 ROPGEF12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.13299'
Avg. expression score in LCM sample: '5.17367'
Tissue used: 'pure endosperm, no chalazal'
AT1G79860 ROPGEF12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.26456'
Avg. expression score in LCM sample: '5.17367'
Tissue used: 'full endosperm'
AT1G79860 ROPGEF12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.74545'
Avg. embryo expression (LCM): '0'
AT1G79850 RPS17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '592.199'
Avg. embryo expression (LCM): '483.568'
AT1G79850 RPS17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '263.278'
Avg. expression score in LCM sample: '122.316'
Tissue used: 'pure endosperm, no chalazal'
AT1G79850 RPS17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '91.3659'
Avg. expression score in LCM sample: '122.316'
Tissue used: 'full endosperm'
AT1G79850 RPS17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79850 RPS17 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79850 RPS17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79840 GL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.19101 x 10-1 543 4 99.27% 547 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79840 GL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1883 7 21 1415 99.63% 98.54% 1890 1436 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '947.414'
Avg. expression score in LCM sample: '49.1204'
Tissue used: 'full endosperm'
AT1G79840 GL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.455 x 10-3 190 143 74 121 57.06% 62.05% 333 195 TAIR8 Avg. embryo expression (dissected): '506.947'
Avg. embryo expression (LCM): '199.983'
AT1G79840 GL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 1137 17 14 598 98.53% 97.71% 1154 612 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1057.29'
Avg. expression score in LCM sample: '49.1204'
Tissue used: 'pure endosperm, no chalazal'
AT1G79840 GL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.2 x 10-11 11966 34 99.72% 12000 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT1G79840 GL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.09 x 10-4 4785 23 99.52% 4808 TAIR8 Mutant effect: 'N/A (not a MEG)'