GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G161418	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.08556 x 10^-2	72	39	50	34	64.86%	40.48%	111	84	RefGen V2	χ2 p-value for B73 x Mo17: '.0017349' χ2 p-value for Mo17 x B73: '.0808556' Biased in favor of strain: ''
GRMZM2G161418	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.436203 x 10^-1	49	20	49	42	71.01%	46.15%	69	91	RefGen V2	χ2 p-value for B73 x Mo17: '.4436203' χ2 p-value for Mo17 x B73: '.0000331' Biased in favor of strain: ''
GRMZM2G161382	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G161382	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	3	6	3	72.73%	33.33%	11	9	RefGen V2	χ2 p-value for B73 x Mo17: '.131668' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G161377	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.888444 x 10^-1	19	13	12	5	59.38%	29.41%	32	17	RefGen V2	χ2 p-value for B73 x Mo17: '.2888444' χ2 p-value for Mo17 x B73: '.0895551' Biased in favor of strain: ''
GRMZM2G161377	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.939373 x 10^-1	19	5	11	2	79.17%	15.38%	24	13	RefGen V2	χ2 p-value for B73 x Mo17: '.1939373' χ2 p-value for Mo17 x B73: '.0000877' Biased in favor of strain: ''
GRMZM2G161368	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.250468 x 10^-1	89	30	35	50	74.79%	58.82%	119	85	RefGen V2	χ2 p-value for B73 x Mo17: '.0601428' χ2 p-value for Mo17 x B73: '.1250468' Biased in favor of strain: ''
GRMZM2G161368	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.828997 x 10^-1	61	112	61	69	35.26%	53.08%	173	130	RefGen V2	χ2 p-value for B73 x Mo17: '.0001056' χ2 p-value for Mo17 x B73: '.4828997' Biased in favor of strain: ''
GRMZM2G161335	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.55522 x 10^-2	741	820	845	1214	47.47%	58.96%	1561	2059	RefGen V2	χ2 p-value for B73 x Mo17: '.0455522' χ2 p-value for Mo17 x B73: '4.22e-16' Biased in favor of strain: 'Mo17'
GRMZM2G161335	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.74 x 10^-27	1524	339	753	891	81.80%	54.20%	1863	1644	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '7.74e-27' Biased in favor of strain: 'B73'
GRMZM2G161315	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.47 x 10^-6	128	24	98	56	84.21%	36.36%	152	154	RefGen V2	χ2 p-value for B73 x Mo17: '4.47e-06' χ2 p-value for Mo17 x B73: '1.50e-15' Biased in favor of strain: 'B73'
GRMZM2G161315	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.32 x 10^-8	677	413	554	383	62.11%	40.88%	1090	937	RefGen V2	χ2 p-value for B73 x Mo17: '1.28e-15' χ2 p-value for Mo17 x B73: '2.32e-08' Biased in favor of strain: 'B73'
GRMZM2G161306	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G161306	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	0	0	0	100.00%		8	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G161302	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.89418 x 10^-2	195	64	89	129	75.29%	59.17%	259	218	RefGen V2	χ2 p-value for B73 x Mo17: '.0032427' χ2 p-value for Mo17 x B73: '.0189418' Biased in favor of strain: ''
GRMZM2G161302	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.314059 x 10^-1	123	71	58	48	63.40%	45.28%	194	106	RefGen V2	χ2 p-value for B73 x Mo17: '.0001889' χ2 p-value for Mo17 x B73: '.3314059' Biased in favor of strain: ''
GRMZM2G161299	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.32167 x 10^-2	378	196	223	184	65.85%	45.21%	574	407	RefGen V2	χ2 p-value for B73 x Mo17: '3.04e-14' χ2 p-value for Mo17 x B73: '.0532167' Biased in favor of strain: ''
GRMZM2G161299	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.151 x 10^-4	858	345	545	721	71.32%	56.95%	1203	1266	RefGen V2	χ2 p-value for B73 x Mo17: '.0006151' χ2 p-value for Mo17 x B73: '2.25e-13' Biased in favor of strain: 'B73'
GRMZM2G161293	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.200549 x 10^-1	57	30	53	47	65.52%	47.00%	87	100	RefGen V2	χ2 p-value for B73 x Mo17: '.8200549' χ2 p-value for Mo17 x B73: '.0000302' Biased in favor of strain: ''
GRMZM2G161293	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.653131 x 10^-1	67	39	49	52	63.21%	51.49%	106	101	RefGen V2	χ2 p-value for B73 x Mo17: '.0065361' χ2 p-value for Mo17 x B73: '.7653131' Biased in favor of strain: ''
GRMZM2G161285	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.78 x 10^-8	739	464	573	405	61.43%	41.41%	1203	978	RefGen V2	χ2 p-value for B73 x Mo17: '2.22e-15' χ2 p-value for Mo17 x B73: '7.78e-08' Biased in favor of strain: 'B73'
GRMZM2G161285	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.32 x 10^-5	681	254	382	531	72.83%	58.16%	935	913	RefGen V2	χ2 p-value for B73 x Mo17: '.0000632' χ2 p-value for Mo17 x B73: '4.96e-08' Biased in favor of strain: 'B73'
GRMZM2G161274	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	988	125	505	223	88.77%	30.63%	1113	728	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G161274	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.513491 x 10^-1	60	15	12	7	80.00%	36.84%	75	19	RefGen V2	χ2 p-value for B73 x Mo17: '2.03e-07' χ2 p-value for Mo17 x B73: '.2513491' Biased in favor of strain: ''
GRMZM2G161263	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.03 x 10^-6	51	13	47	7	79.69%	12.96%	64	54	RefGen V2	χ2 p-value for B73 x Mo17: '2.03e-06' χ2 p-value for Mo17 x B73: '5.23e-08' Biased in favor of strain: 'B73'
GRMZM2G161263	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.61925 x 10^-2	14	0	7	5	100.00%	41.67%	14	12	RefGen V2	χ2 p-value for B73 x Mo17: '.0081512' χ2 p-value for Mo17 x B73: '.0661925' Biased in favor of strain: ''
GRMZM2G161245	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.45 x 10^-17	308	362	154	645	45.97%	80.73%	670	799	RefGen V2	χ2 p-value for B73 x Mo17: '6.29e-30' χ2 p-value for Mo17 x B73: '3.45e-17' Biased in favor of strain: 'Mo17'
GRMZM2G161245	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2387	1304	2634	1281	64.67%	32.72%	3691	3915	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G161242	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	5174	3004	5066	3263	63.27%	39.18%	8178	8329	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G161242	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	5151	1714	3114	3587	75.03%	53.53%	6865	6701	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G161233	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.95307 x 10^-2	26	5	10	37	83.87%	78.72%	31	47	RefGen V2	χ2 p-value for B73 x Mo17: '.0421554' χ2 p-value for Mo17 x B73: '.0795307' Biased in favor of strain: ''
GRMZM2G161233	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	29	22	8	8	56.86%	50.00%	51	16	RefGen V2	χ2 p-value for B73 x Mo17: '.3269894' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G161222	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.27 x 10^-6	256	111	209	121	69.75%	36.67%	367	330	RefGen V2	χ2 p-value for B73 x Mo17: '3.76e-14' χ2 p-value for Mo17 x B73: '1.27e-06' Biased in favor of strain: 'B73'
GRMZM2G161222	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.985301 x 10^-1	143	61	84	91	70.10%	52.00%	204	175	RefGen V2	χ2 p-value for B73 x Mo17: '.2985301' χ2 p-value for Mo17 x B73: '.0000386' Biased in favor of strain: ''
GRMZM2G161212	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.680992 x 10^-1	16	7	9	12	69.57%	57.14%	23	21	RefGen V2	χ2 p-value for B73 x Mo17: '.7680992' χ2 p-value for Mo17 x B73: '.3545393' Biased in favor of strain: ''
GRMZM2G161212	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.70999 x 10^-2	74	54	102	46	57.81%	31.08%	128	148	RefGen V2	χ2 p-value for B73 x Mo17: '.0770999' χ2 p-value for Mo17 x B73: '4.16e-06' Biased in favor of strain: ''
GRMZM2G161154	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	16168	2283	14321	2781	87.63%	16.26%	18451	17102	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G161154	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3026	230	812	282	92.94%	25.78%	3256	1094	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G161102	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.47 x 10^-6	567	194	305	355	74.51%	53.79%	761	660	RefGen V2	χ2 p-value for B73 x Mo17: '4.47e-06' χ2 p-value for Mo17 x B73: '2.24e-12' Biased in favor of strain: 'B73'
GRMZM2G161102	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.379726 x 10^-1	227	181	154	165	55.64%	51.72%	408	319	RefGen V2	χ2 p-value for B73 x Mo17: '.022766' χ2 p-value for Mo17 x B73: '.5379726' Biased in favor of strain: ''
GRMZM2G161097	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.06 x 10^-22	122	5	102	2	96.06%	1.92%	127	104	RefGen V2	χ2 p-value for B73 x Mo17: '2.99e-25' χ2 p-value for Mo17 x B73: '1.06e-22' Biased in favor of strain: 'B73'
GRMZM2G161097	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	6	1	50.00%	14.29%	4	7	RefGen V2	χ2 p-value for B73 x Mo17: '.4794928' χ2 p-value for Mo17 x B73: '.0032835' Biased in favor of strain: ''
GRMZM2G161087	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.613095 x 10^-1	83	37	55	67	69.17%	54.92%	120	122	RefGen V2	χ2 p-value for B73 x Mo17: '.5613095' χ2 p-value for Mo17 x B73: '.0059089' Biased in favor of strain: ''
GRMZM2G161087	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.834106 x 10^-1	118	95	94	92	55.40%	49.46%	213	186	RefGen V2	χ2 p-value for B73 x Mo17: '.115041' χ2 p-value for Mo17 x B73: '.8834106' Biased in favor of strain: ''
GRMZM2G161040	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.222 x 10^-4	564	224	335	246	71.57%	42.34%	788	581	RefGen V2	χ2 p-value for B73 x Mo17: '9.12e-34' χ2 p-value for Mo17 x B73: '.0002222' Biased in favor of strain: 'B73'
GRMZM2G161040	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.50094 x 10^-2	740	268	306	526	73.41%	63.22%	1008	832	RefGen V2	χ2 p-value for B73 x Mo17: '5.54e-06' χ2 p-value for Mo17 x B73: '.0350094' Biased in favor of strain: ''
GRMZM2G161035	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	0	10	0	100.00%	0.00%	6	10	RefGen V2	χ2 p-value for B73 x Mo17: '.0832656' χ2 p-value for Mo17 x B73: '7.74e-06' Biased in favor of strain: ''
GRMZM2G161035	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	2	0	100.00%	0.00%	4	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G161019	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	275	30	305	24	90.16%	7.29%	305	329	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G161019	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.175 x 10^-4	39	3	32	7	92.86%	17.95%	42	39	RefGen V2	χ2 p-value for B73 x Mo17: '.0003175' χ2 p-value for Mo17 x B73: '1.09e-10' Biased in favor of strain: 'B73'
GRMZM2G161012	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	4	1	5	0.00%	83.33%	4	6	RefGen V2	χ2 p-value for B73 x Mo17: '.0046775' χ2 p-value for Mo17 x B73: '.3864763' Biased in favor of strain: ''
GRMZM2G161012	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		6	1	3	7	85.71%	70.00%	7	10	RefGen V2	χ2 p-value for B73 x Mo17: '.0587817' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: ''
GRMZM2G160996	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.815113 x 10^-1	4	6	6	7	40.00%	53.85%	10	13	RefGen V2	χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.7815113' Biased in favor of strain: ''
GRMZM2G160996	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	0	1	100.00%	100.00%	5	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G160994	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.218754 x 10^-1	356	170	229	298	67.68%	56.55%	526	527	RefGen V2	χ2 p-value for B73 x Mo17: '.6218754' χ2 p-value for Mo17 x B73: '8.29e-07' Biased in favor of strain: ''
GRMZM2G160994	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.693144 x 10^-1	822	786	698	630	51.12%	47.44%	1608	1328	RefGen V2	χ2 p-value for B73 x Mo17: '.3693144' χ2 p-value for Mo17 x B73: '.0620424' Biased in favor of strain: ''
GRMZM2G160983	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.53777 x 10^-2	315	247	273	226	56.05%	45.29%	562	499	RefGen V2	χ2 p-value for B73 x Mo17: '.0041254' χ2 p-value for Mo17 x B73: '.0353777' Biased in favor of strain: 'B73'
GRMZM2G160983	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.64 x 10^-9	548	152	270	336	78.29%	55.45%	700	606	RefGen V2	χ2 p-value for B73 x Mo17: '6.98e-11' χ2 p-value for Mo17 x B73: '4.64e-09' Biased in favor of strain: 'B73'
GRMZM2G160971	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G160971	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.3158 x 10^-3	56	25	40	17	69.14%	29.82%	81	57	RefGen V2	χ2 p-value for B73 x Mo17: '.0005722' χ2 p-value for Mo17 x B73: '.0023158' Biased in favor of strain: 'B73'
GRMZM2G160966	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.75 x 10^-14	25	117	17	97	17.61%	85.09%	142	114	RefGen V2	χ2 p-value for B73 x Mo17: '1.16e-14' χ2 p-value for Mo17 x B73: '6.75e-14' Biased in favor of strain: 'Mo17'
GRMZM2G160966	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.994266 x 10^-1	86	27	36	80	76.11%	68.97%	113	116	RefGen V2	χ2 p-value for B73 x Mo17: '.0332903' χ2 p-value for Mo17 x B73: '.5994266' Biased in favor of strain: ''
GRMZM2G160964	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.143409 x 10^-1	485	213	256	345	69.48%	57.40%	698	601	RefGen V2	χ2 p-value for B73 x Mo17: '.1143409' χ2 p-value for Mo17 x B73: '1.46e-06' Biased in favor of strain: ''
GRMZM2G160964	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.432 x 10^-4	338	206	286	202	62.13%	41.39%	544	488	RefGen V2	χ2 p-value for B73 x Mo17: '1.52e-08' χ2 p-value for Mo17 x B73: '.0001432' Biased in favor of strain: 'B73'
GRMZM2G160958	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.84401 x 10^-2	42	23	27	10	64.62%	27.03%	65	37	RefGen V2	χ2 p-value for B73 x Mo17: '.0184401' χ2 p-value for Mo17 x B73: '.0051935' Biased in favor of strain: 'B73'
GRMZM2G160958	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	2	17	6	60.00%	26.09%	5	23	RefGen V2	χ2 p-value for B73 x Mo17: '.7518208' χ2 p-value for Mo17 x B73: '.0000365' Biased in favor of strain: ''
GRMZM2G160927	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	1	5	2	87.50%	28.57%	8	7	RefGen V2	χ2 p-value for B73 x Mo17: '.2113029' χ2 p-value for Mo17 x B73: '.0325094' Biased in favor of strain: ''
GRMZM2G160927	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.7617 x 10^-3	23	3	19	4	88.46%	17.39%	26	23	RefGen V2	χ2 p-value for B73 x Mo17: '.0000877' χ2 p-value for Mo17 x B73: '.0017617' Biased in favor of strain: 'B73'
GRMZM2G160917	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	1	1	1	87.50%	50.00%	8	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0338949' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G160917	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G160906	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.110686 x 10^-1	306	133	150	285	69.70%	65.52%	439	435	RefGen V2	χ2 p-value for B73 x Mo17: '.1770674' χ2 p-value for Mo17 x B73: '.6110686' Biased in favor of strain: ''
GRMZM2G160906	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.19 x 10^-9	927	683	799	567	57.58%	41.51%	1610	1366	RefGen V2	χ2 p-value for B73 x Mo17: '1.19e-09' χ2 p-value for Mo17 x B73: '3.45e-10' Biased in favor of strain: 'B73'
GRMZM2G160902	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.04 x 10^-8	328	118	232	124	73.54%	34.83%	446	356	RefGen V2	χ2 p-value for B73 x Mo17: '2.68e-23' χ2 p-value for Mo17 x B73: '1.04e-08' Biased in favor of strain: 'B73'
GRMZM2G160902	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.016433 x 10^-1	346	139	192	429	71.34%	69.08%	485	621	RefGen V2	χ2 p-value for B73 x Mo17: '.0290173' χ2 p-value for Mo17 x B73: '.2016433' Biased in favor of strain: ''
GRMZM2G160889	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.96 x 10^-6	0	48	0	41	0.00%	100.00%	48	41	RefGen V2	χ2 p-value for B73 x Mo17: '1.15e-22' χ2 p-value for Mo17 x B73: '5.96e-06' Biased in favor of strain: 'Mo17'
GRMZM2G160889	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.55 x 10^-13	1	58	0	52	1.69%	100.00%	59	52	RefGen V2	χ2 p-value for B73 x Mo17: '1.16e-13' χ2 p-value for Mo17 x B73: '5.55e-13' Biased in favor of strain: 'Mo17'
GRMZM2G160887	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.8514 x 10^-3	402	269	336	260	59.91%	43.62%	671	596	RefGen V2	χ2 p-value for B73 x Mo17: '2.83e-07' χ2 p-value for Mo17 x B73: '.0018514' Biased in favor of strain: 'B73'
GRMZM2G160887	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.776 x 10^-3	314	113	194	304	73.54%	61.04%	427	498	RefGen V2	χ2 p-value for B73 x Mo17: '.0026021' χ2 p-value for Mo17 x B73: '.007776' Biased in favor of strain: 'B73'
GRMZM2G160842	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.815577 x 10^-1	19	13	6	23	59.38%	79.31%	32	29	RefGen V2	χ2 p-value for B73 x Mo17: '.3815577' χ2 p-value for Mo17 x B73: '.1486348' Biased in favor of strain: ''
GRMZM2G160842	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.485063 x 10^-1	33	20	14	11	62.26%	44.00%	53	25	RefGen V2	χ2 p-value for B73 x Mo17: '.0741499' χ2 p-value for Mo17 x B73: '.5485063' Biased in favor of strain: ''
GRMZM2G160834	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		11	0	0	0	100.00%		11	0	RefGen V2	χ2 p-value for B73 x Mo17: '.0009111' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G160834	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		152	0	0	5	100.00%	100.00%	152	5	RefGen V2	χ2 p-value for B73 x Mo17: '2.84e-18' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: ''
GRMZM2G160816	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	3	0.00%	100.00%	1	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G160816	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	6	0	9	0.00%	100.00%	6	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: ''
GRMZM2G160812	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	4	0	11	0.00%	100.00%	4	11	RefGen V2	χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0009111' Biased in favor of strain: ''
GRMZM2G160812	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	3		100.00%	0	3	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G160801	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G160801	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	1	1	0	80.00%	0.00%	5	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G160770	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2076	635	1866	742	76.58%	28.45%	2711	2608	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G160770	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2921	433	1712	795	87.09%	31.71%	3354	2507	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G160752	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.80814 x 10^-2	42	11	20	24	79.25%	54.55%	53	44	RefGen V2	χ2 p-value for B73 x Mo17: '.0520713' χ2 p-value for Mo17 x B73: '.0880814' Biased in favor of strain: ''
GRMZM2G160752	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.795001 x 10^-1	55	37	39	33	59.78%	45.83%	92	72	RefGen V2	χ2 p-value for B73 x Mo17: '.0605689' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G160739	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.11 x 10^-17	677	251	236	456	72.95%	65.90%	928	692	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '6.11e-17' Biased in favor of strain: ''
GRMZM2G160739	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	maternally biased	1.36 x 10^-8	5339	2159	1817	4260	71.21%	70.10%	7498	6077	RefGen V2	χ2 p-value for B73 x Mo17: '7.61e-17' χ2 p-value for Mo17 x B73: '1.36e-08' Biased in favor of strain: ''
GRMZM2G160719	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.0 x 10^-13	32	87	10	148	26.89%	93.67%	119	158	RefGen V2	χ2 p-value for B73 x Mo17: '3.43e-20' χ2 p-value for Mo17 x B73: '6.00e-13' Biased in favor of strain: 'Mo17'
GRMZM2G160719	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	5	4	17	44.44%	80.95%	9	21	RefGen V2	χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.0045563' Biased in favor of strain: ''
GRMZM2G160702	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.46 x 10^-5	850	646	603	472	56.82%	43.91%	1496	1075	RefGen V2	χ2 p-value for B73 x Mo17: '1.33e-07' χ2 p-value for Mo17 x B73: '.0000646' Biased in favor of strain: 'B73'
GRMZM2G160702	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	1.05 x 10^-14	164	184	256	222	47.13%	46.44%	348	478	RefGen V2	χ2 p-value for B73 x Mo17: '1.05e-14' χ2 p-value for Mo17 x B73: '6.64e-21' Biased in favor of strain: ''
GRMZM2G160697	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.6 x 10^-18	679	149	306	305	82.00%	49.92%	828	611	RefGen V2	χ2 p-value for B73 x Mo17: '7.79e-21' χ2 p-value for Mo17 x B73: '1.60e-18' Biased in favor of strain: 'B73'
GRMZM2G160697	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.09 x 10^-6	260	122	167	89	68.06%	34.77%	382	256	RefGen V2	χ2 p-value for B73 x Mo17: '1.66e-12' χ2 p-value for Mo17 x B73: '1.09e-06' Biased in favor of strain: 'B73'

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