Displaying data sets 12401 - 12500 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G49138 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49138 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.166611'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G49130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.235124'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G49130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G49130 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49130 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49130 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.746995'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G49120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.2534'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G49120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.99064'
Avg. embryo expression (LCM): '3.62943'
AT5G49120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '13.2232'
Avg. expression score in LCM sample: '9.02452'
Tissue used: 'pure endosperm, no chalazal'
AT5G49110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.9005'
Avg. expression score in LCM sample: '9.02452'
Tissue used: 'full endosperm'
AT5G49110 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '25.7418'
Avg. embryo expression (LCM): '23.4092'
AT5G49110 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49110 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0989 x 10-2 1 10 9.09% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49110 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '178.55'
Avg. expression score in LCM sample: '44.667'
Tissue used: 'pure endosperm, no chalazal'
AT5G49100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '166.483'
Avg. expression score in LCM sample: '44.667'
Tissue used: 'full endosperm'
AT5G49100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '973.966'
Avg. embryo expression (LCM): '717.936'
AT5G49100 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49100 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49100 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49070 KCS21 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.23371'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G49070 KCS21 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.77365'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G49070 KCS21 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.61668'
Avg. embryo expression (LCM): '.904218'
AT5G49070 KCS21 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49070 KCS21 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49070 KCS21 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.34478 x 10-1 5 7 7 12 41.67% 63.16% 12 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.148893'
Avg. expression score for this sample: '68.8401'
Avg. expression score in LCM sample: '47.195'
Tissue used: 'pure endosperm, no chalazal'
AT5G49060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.9898 x 10-2 27 2 12 43 93.10% 78.18% 29 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.148893'
Avg. expression score for this sample: '198.096'
Avg. expression score in LCM sample: '47.195'
Tissue used: 'full endosperm'
AT5G49060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 9 11 1 5 45.00% 83.33% 20 6 TAIR8 Avg. embryo expression (dissected): '104.448'
Avg. embryo expression (LCM): '99.1248'
AT5G49060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.0678 x 10-1 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.3 x 10-5 83 4 95.40% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.7 x 10-6 128 6 95.52% 134 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.28725'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G49050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.369754'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G49050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G49050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49050 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.758 x 10-3 6 0 0 17 100.00% 100.00% 6 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.7e-13'
Avg. expression score for this sample: '99.0525'
Avg. expression score in LCM sample: '12.7872'
Tissue used: 'pure endosperm, no chalazal'
AT5G49040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.2 x 10-10 14 0 0 71 100.00% 100.00% 14 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.7e-13'
Avg. expression score for this sample: '199.746'
Avg. expression score in LCM sample: '12.7872'
Tissue used: 'full endosperm'
AT5G49040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '12.3122'
Avg. embryo expression (LCM): '0'
AT5G49040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.136 16 1 94.12% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 100 0 100.00% 100 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 151 0 100.00% 151 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49030 OVA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 2 1 0 66.67% 0.00% 6 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '164.988'
Avg. expression score in LCM sample: '34.5107'
Tissue used: 'pure endosperm, no chalazal'
AT5G49030 OVA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 0 5 4 100.00% 44.44% 5 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '104.759'
Avg. expression score in LCM sample: '34.5107'
Tissue used: 'full endosperm'
AT5G49030 OVA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.37986 x 10-1 10 6 1 1 62.50% 50.00% 16 2 TAIR8 Avg. embryo expression (dissected): '531.892'
Avg. embryo expression (LCM): '369.951'
AT5G49030 OVA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49030 OVA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.0961 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49030 OVA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.3978 x 10-2 16 2 88.89% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49020 PRMT4A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.73609 x 10-1 19 10 9 11 65.52% 55.00% 29 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.601586'
Avg. expression score for this sample: '55.5128'
Avg. expression score in LCM sample: '26.3093'
Tissue used: 'pure endosperm, no chalazal'
AT5G49020 PRMT4A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.38548 x 10-1 30 6 23 20 83.33% 46.51% 36 43 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.601586'
Avg. expression score for this sample: '53.5359'
Avg. expression score in LCM sample: '26.3093'
Tissue used: 'full endosperm'
AT5G49020 PRMT4A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.69982 x 10-1 31 16 7 5 65.96% 41.67% 47 12 TAIR8 Avg. embryo expression (dissected): '91.5535'
Avg. embryo expression (LCM): '86.6291'
AT5G49020 PRMT4A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.79151 x 10-1 11 3 78.57% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49020 PRMT4A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.12162 x 10-1 10 2 83.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49020 PRMT4A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.3 x 10-7 46 1 97.87% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49015 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '43.4138'
Avg. expression score in LCM sample: '14.8008'
Tissue used: 'pure endosperm, no chalazal'
AT5G49015 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '84.5881'
Avg. expression score in LCM sample: '14.8008'
Tissue used: 'full endosperm'
AT5G49015 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '11.3287'
Avg. embryo expression (LCM): '16.8536'
AT5G49015 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49015 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49015 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49010 SLD5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '20.7888'
Avg. expression score in LCM sample: '14.9331'
Tissue used: 'pure endosperm, no chalazal'
AT5G49010 SLD5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '16.1274'
Avg. expression score in LCM sample: '14.9331'
Tissue used: 'full endosperm'
AT5G49010 SLD5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 1 1 0 50.00% 0.00% 2 1 TAIR8 Avg. embryo expression (dissected): '30.4767'
Avg. embryo expression (LCM): '55.2954'
AT5G49010 SLD5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49010 SLD5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49010 SLD5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 1 0 75.00% 0.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.394389'
Avg. expression score for this sample: '231.523'
Avg. expression score in LCM sample: '204.095'
Tissue used: 'pure endosperm, no chalazal'
AT5G49000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.0226 x 10-2 4 0 0 7 100.00% 100.00% 4 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.394389'
Avg. expression score for this sample: '339.288'
Avg. expression score in LCM sample: '204.095'
Tissue used: 'full endosperm'
AT5G49000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.82051 x 10-1 3 1 0 3 75.00% 100.00% 4 3 TAIR8 Avg. embryo expression (dissected): '225.004'
Avg. embryo expression (LCM): '235.549'
AT5G49000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.32683 x 10-1 12 6 66.67% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.98321 x 10-1 12 5 70.59% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G48990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.58349 x 10-1 119 73 60 167 61.98% 73.57% 192 227 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.163304'
Avg. expression score for this sample: '150.732'
Avg. expression score in LCM sample: '69.3154'
Tissue used: 'pure endosperm, no chalazal'
AT5G48990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.64147 x 10-1 221 137 125 386 61.73% 75.54% 358 511 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.163304'
Avg. expression score for this sample: '202.016'
Avg. expression score in LCM sample: '69.3154'
Tissue used: 'full endosperm'
AT5G48990 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 0.0936 115 177 19 35 39.38% 64.81% 292 54 TAIR8 Avg. embryo expression (dissected): '161.956'
Avg. embryo expression (LCM): '155.098'
AT5G48990 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.32804 x 10-1 111 55 66.87% 166 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G48990 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.41 x 10-4 306 80 79.27% 386 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G48990 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0 x 10-6 293 65 81.84% 358 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G48980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 10 4 3 4 71.43% 57.14% 14 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.3614'
Avg. expression score for this sample: '89.8427'
Avg. expression score in LCM sample: '305.173'
Tissue used: 'pure endosperm, no chalazal'
AT5G48980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.70062 x 10-1 7 1 19 16 87.50% 45.71% 8 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.3614'
Avg. expression score for this sample: '55.6315'
Avg. expression score in LCM sample: '305.173'
Tissue used: 'full endosperm'
AT5G48980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '8.95012'
Avg. embryo expression (LCM): '10.5492'
AT5G48980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.30769 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G48980 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.6 x 10-6 489 1201 28.93% 1690 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G48980 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4 x 10-12 296 18 94.27% 314 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G48970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 5 1 10 37.50% 90.91% 8 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.836749'
Avg. expression score for this sample: '46.1236'
Avg. expression score in LCM sample: '56.8809'
Tissue used: 'pure endosperm, no chalazal'
AT5G48970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.98482 x 10-1 11 3 7 15 78.57% 68.18% 14 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.836749'
Avg. expression score for this sample: '40.0779'
Avg. expression score in LCM sample: '56.8809'
Tissue used: 'full endosperm'
AT5G48970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.31857 x 10-1 6 6 1 4 50.00% 80.00% 12 5 TAIR8 Avg. embryo expression (dissected): '62.9246'
Avg. embryo expression (LCM): '57.129'
AT5G48970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.25938 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G48970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 242 101 70.55% 343 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G48970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.42613 x 10-1 65 14 82.28% 79 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G48960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 0 3 66.67% 100.00% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '30.1264'
Avg. expression score in LCM sample: '16.7262'
Tissue used: 'pure endosperm, no chalazal'
AT5G48960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 9 2 6 5 81.82% 45.45% 11 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '63.8298'
Avg. expression score in LCM sample: '16.7262'
Tissue used: 'full endosperm'