Displaying data sets 124801 - 124900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G01250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1243.91'
Avg. expression score in LCM sample: '1072.92'
Tissue used: 'pure endosperm, no chalazal'
AT2G01250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '3120.91'
Avg. embryo expression (LCM): '7344.54'
AT2G01250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 4 6 100.00% 60.00% 2 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1313.83'
Avg. expression score in LCM sample: '1072.92'
Tissue used: 'full endosperm'
AT2G01250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1677 x 10-1 10 1 90.91% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.02683 x 10-1 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.04396 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.755439'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G01240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G01240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G01220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '109.121'
Avg. expression score in LCM sample: '42.8885'
Tissue used: 'pure endosperm, no chalazal'
AT2G01220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '126.878'
Avg. embryo expression (LCM): '130.069'
AT2G01220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '90.7135'
Avg. expression score in LCM sample: '42.8885'
Tissue used: 'full endosperm'
AT2G01220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.329 x 10-2 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.11765 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.97043 x 10-1 27 11 71.05% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 26 16 20 44 61.90% 68.75% 42 64 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.194745'
Avg. expression score for this sample: '255.949'
Avg. expression score in LCM sample: '90.8772'
Tissue used: 'full endosperm'
AT2G01210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.82771 x 10-1 38 59 21 23 39.18% 52.27% 97 44 TAIR8 Avg. embryo expression (dissected): '1766.37'
Avg. embryo expression (LCM): '683.739'
AT2G01210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.5351 x 10-2 8 23 3 12 25.81% 80.00% 31 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.194745'
Avg. expression score for this sample: '330.402'
Avg. expression score in LCM sample: '90.8772'
Tissue used: 'pure endosperm, no chalazal'
AT2G01200 IAA32 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.43256'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G01200 IAA32 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.60824'
Avg. embryo expression (LCM): '2.95127'
AT2G01200 IAA32 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 4 1 0 0 80.00% 5 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.48556'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G01200 IAA32 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.33333 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01200 IAA32 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01200 IAA32 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01190 PDE331 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.364 x 10-3 175 41 81.02% 216 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01190 PDE331 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.2 x 10-7 376 80 82.46% 456 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01190 PDE331 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1170 84 93.30% 1254 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01190 PDE331 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.1 x 10-22 711 153 120 540 82.29% 81.82% 864 660 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.0e-07'
Avg. expression score for this sample: '731.673'
Avg. expression score in LCM sample: '725.974'
Tissue used: 'full endosperm'
AT2G01190 PDE331 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.3128 x 10-2 113 94 51 93 54.59% 64.58% 207 144 TAIR8 Avg. embryo expression (dissected): '356.687'
Avg. embryo expression (LCM): '98.3839'
AT2G01190 PDE331 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.27135 x 10-1 816 487 438 965 62.62% 68.78% 1303 1403 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.0e-07'
Avg. expression score for this sample: '1516.22'
Avg. expression score in LCM sample: '725.974'
Tissue used: 'pure endosperm, no chalazal'
AT2G01180 PAP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.14098 x 10-1 9 0 4 10 100.00% 71.43% 9 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.857818'
Avg. expression score for this sample: '47.0096'
Avg. expression score in LCM sample: '21.3855'
Tissue used: 'pure endosperm, no chalazal'
AT2G01180 PAP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 6.08392 x 10-1 6 2 0 0 75.00% 8 0 TAIR8 Avg. embryo expression (dissected): '54.8127'
Avg. embryo expression (LCM): '7.47235'
AT2G01180 PAP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.31218 x 10-1 15 9 9 15 62.50% 62.50% 24 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.857818'
Avg. expression score for this sample: '71.6438'
Avg. expression score in LCM sample: '21.3855'
Tissue used: 'full endosperm'
AT2G01180 PAP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.6587 x 10-2 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01180 PAP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01180 PAP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01175 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01175 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01175 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01175 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.23077 x 10-1 3 1 0 4 75.00% 100.00% 4 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.389847'
Avg. expression score for this sample: '12.4263'
Avg. expression score in LCM sample: '1.10234'
Tissue used: 'full endosperm'
AT2G01175 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 0 6 0 2 0.00% 100.00% 6 2 TAIR8 Avg. embryo expression (dissected): '18.0294'
Avg. embryo expression (LCM): '2.82568'
AT2G01175 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 1 2 100.00% 66.67% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.389847'
Avg. expression score for this sample: '5.02965'
Avg. expression score in LCM sample: '1.10234'
Tissue used: 'pure endosperm, no chalazal'
AT2G01170 BAT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 1 0 100.00% 0.00% 4 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '36.1525'
Avg. expression score in LCM sample: '10.6119'
Tissue used: 'pure endosperm, no chalazal'
AT2G01170 BAT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.77512 x 10-1 8 8 3 6 50.00% 66.67% 16 9 TAIR8 Avg. embryo expression (dissected): '234.313'
Avg. embryo expression (LCM): '57.9076'
AT2G01170 BAT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 15 6 5 5 71.43% 50.00% 21 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '63.1987'
Avg. expression score in LCM sample: '10.6119'
Tissue used: 'full endosperm'
AT2G01170 BAT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.80802 x 10-1 19 7 73.08% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01170 BAT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01170 BAT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G01160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G01160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G01150 RHA2B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 2 4 4 80.00% 50.00% 10 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '76.901'
Avg. expression score in LCM sample: '6.95211'
Tissue used: 'pure endosperm, no chalazal'
AT2G01150 RHA2B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.89073 x 10-1 12 8 4 4 60.00% 50.00% 20 8 TAIR8 Avg. embryo expression (dissected): '209.9'
Avg. embryo expression (LCM): '28.2066'
AT2G01150 RHA2B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 15 5 8 8 75.00% 50.00% 20 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '52.7245'
Avg. expression score in LCM sample: '6.95211'
Tissue used: 'full endosperm'
AT2G01150 RHA2B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.64725 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01150 RHA2B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.36364 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01150 RHA2B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01140 PDE345 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01140 PDE345 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.4125 x 10-2 22 2 91.67% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01140 PDE345 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.90226 x 10-1 11 1 91.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01140 PDE345 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.15093 x 10-1 24 14 10 41 63.16% 80.39% 38 51 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.305279'
Avg. expression score for this sample: '658.819'
Avg. expression score in LCM sample: '702.737'
Tissue used: 'full endosperm'
AT2G01140 PDE345 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 4 0 1 50.00% 100.00% 8 1 TAIR8 Avg. embryo expression (dissected): '1097.24'
Avg. embryo expression (LCM): '843.258'
AT2G01140 PDE345 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.31094 x 10-1 10 3 2 5 76.92% 71.43% 13 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.305279'
Avg. expression score for this sample: '1025.91'
Avg. expression score in LCM sample: '702.737'
Tissue used: 'pure endosperm, no chalazal'
AT2G01130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.5148 x 10-1 10 7 10 15 58.82% 60.00% 17 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.817142'
Avg. expression score for this sample: '19.071'
Avg. expression score in LCM sample: '10.0975'
Tissue used: 'pure endosperm, no chalazal'
AT2G01130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.06458 x 10-1 33 26 4 4 55.93% 50.00% 59 8 TAIR8 Avg. embryo expression (dissected): '41.6237'
Avg. embryo expression (LCM): '45.7635'
AT2G01130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.00317 x 10-1 39 11 26 52 78.00% 66.67% 50 78 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.817142'
Avg. expression score for this sample: '36.722'
Avg. expression score in LCM sample: '10.0975'
Tissue used: 'full endosperm'
AT2G01130 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.7 x 10-5 66 5 92.96% 71 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01130 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.2018 x 10-2 44 8 84.62% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01130 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01120 ORC4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01120 ORC4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01120 ORC4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01120 ORC4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '37.0713'
Avg. expression score in LCM sample: '26.3975'
Tissue used: 'full endosperm'
AT2G01120 ORC4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '50.5345'
Avg. embryo expression (LCM): '45.123'
AT2G01120 ORC4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '36.575'
Avg. expression score in LCM sample: '26.3975'
Tissue used: 'pure endosperm, no chalazal'
AT2G01111 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '8.96573'
Tissue used: 'pure endosperm, no chalazal'
AT2G01111 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.77025'
Avg. embryo expression (LCM): '0'
AT2G01111 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.45102'
Avg. expression score in LCM sample: '8.96573'
Tissue used: 'full endosperm'
AT2G01111 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01111 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01111 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01110 APG2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 15 6 71.43% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01110 APG2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.96 x 10-4 48 47 50.53% 95 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01110 APG2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.9 x 10-10 177 15 92.19% 192 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01110 APG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.23685 x 10-1 85 15 43 41 85.00% 48.81% 100 84 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.340214'
Avg. expression score for this sample: '70.6686'
Avg. expression score in LCM sample: '69.7416'
Tissue used: 'full endosperm'
AT2G01110 APG2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.10996 x 10-1 72 56 22 9 56.25% 29.03% 128 31 TAIR8 Avg. embryo expression (dissected): '225.116'
Avg. embryo expression (LCM): '99.8156'
AT2G01110 APG2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.07327 x 10-1 106 15 36 26 87.60% 41.94% 121 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.340214'
Avg. expression score for this sample: '144.384'
Avg. expression score in LCM sample: '69.7416'
Tissue used: 'pure endosperm, no chalazal'
AT2G01100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 801 256 432 572 75.78% 56.97% 1057 1004 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000523'
Avg. expression score for this sample: '3226.28'
Avg. expression score in LCM sample: '346.768'
Tissue used: 'pure endosperm, no chalazal'
AT2G01100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.16 x 10-4 628 369 173 100 62.99% 36.63% 997 273 TAIR8 Avg. embryo expression (dissected): '2811.4'
Avg. embryo expression (LCM): '1195.56'
AT2G01100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.8 x 10-7 999 210 412 703 82.63% 63.05% 1209 1115 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000523'
Avg. expression score for this sample: '2075.06'
Avg. expression score in LCM sample: '346.768'
Tissue used: 'full endosperm'
AT2G01100 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1154 97 92.25% 1251 TAIR8 Mutant effect: 'N/A (not a MEG)'