Displaying data sets 124701 - 124800 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G01420 PIN4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.16433'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G01420 PIN4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '49.7762'
Avg. embryo expression (LCM): '47.3333'
AT2G01420 PIN4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01420 PIN4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1189 x 10-2 87 6 93.55% 93 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.72548 x 10-1 7 3 2 3 70.00% 60.00% 10 5 TAIR8 Avg. embryo expression (dissected): '203.456'
Avg. embryo expression (LCM): '146.069'
AT2G01410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.9516 x 10-2 10 3 8 49 76.92% 85.96% 13 57 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.053284'
Avg. expression score for this sample: '245.658'
Avg. expression score in LCM sample: '122.566'
Tissue used: 'full endosperm'
AT2G01410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.6958 x 10-2 92 8 92.00% 100 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 3 2 3 50.00% 60.00% 6 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.053284'
Avg. expression score for this sample: '257.298'
Avg. expression score in LCM sample: '122.566'
Tissue used: 'pure endosperm, no chalazal'
AT2G01400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.65814 x 10-1 13 8 6 23 61.90% 79.31% 21 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.071866'
Avg. expression score for this sample: '273.596'
Avg. expression score in LCM sample: '168.6'
Tissue used: 'pure endosperm, no chalazal'
AT2G01400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.59 x 10-4 112 10 91.80% 122 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.74862 x 10-1 16 14 2 9 53.33% 81.82% 30 11 TAIR8 Avg. embryo expression (dissected): '229.057'
Avg. embryo expression (LCM): '157.598'
AT2G01400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.5136 x 10-2 25 24 9 82 51.02% 90.11% 49 91 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.071866'
Avg. expression score for this sample: '316.456'
Avg. expression score in LCM sample: '168.6'
Tissue used: 'full endosperm'
AT2G01400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.29023 x 10-1 16 1 94.12% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0 x 10-7 104 3 97.20% 107 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01390 EMB3111 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.405 11 1 91.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01390 EMB3111 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 2 4 0 83.33% 0.00% 12 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.7802'
Avg. expression score for this sample: '8.70486'
Avg. expression score in LCM sample: '.852479'
Tissue used: 'full endosperm'
AT2G01390 EMB3111 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.84367 x 10-1 15 9 6 7 62.50% 53.85% 24 13 TAIR8 Avg. embryo expression (dissected): '28.8615'
Avg. embryo expression (LCM): '25.3809'
AT2G01390 EMB3111 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.89847 x 10-1 11 1 1 2 91.67% 66.67% 12 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.7802'
Avg. expression score for this sample: '8.17083'
Avg. expression score in LCM sample: '.852479'
Tissue used: 'pure endosperm, no chalazal'
AT2G01390 EMB3111 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.2791 x 10-2 2 4 33.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01390 EMB3111 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G01370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.178959'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G01370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G01370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 84 20 80.77% 104 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 13 0.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G01360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G01360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G01350 QPT embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1283.26'
Avg. embryo expression (LCM): '491.932'
AT2G01350 QPT endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01350 QPT endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01350 QPT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1143.05'
Avg. expression score in LCM sample: '274.645'
Tissue used: 'full endosperm'
AT2G01350 QPT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1669.55'
Avg. expression score in LCM sample: '274.645'
Tissue used: 'pure endosperm, no chalazal'
AT2G01350 QPT endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01340 At17.1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01340 At17.1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11.126'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G01340 At17.1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01340 At17.1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '9.74889'
Avg. embryo expression (LCM): '37.9269'
AT2G01340 At17.1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01340 At17.1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '39.0666'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G01330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11.5045'
Avg. expression score in LCM sample: '16.447'
Tissue used: 'full endosperm'
AT2G01330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '23.749'
Avg. embryo expression (LCM): '15.1833'
AT2G01330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '18.0336'
Avg. expression score in LCM sample: '16.447'
Tissue used: 'pure endosperm, no chalazal'
AT2G01330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01320 ABCG7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.7 x 10-4 44 6 88.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01320 ABCG7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.23399 x 10-1 5 7 41.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01320 ABCG7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.4156 x 10-1 21 8 13 10 72.41% 43.48% 29 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.490308'
Avg. expression score for this sample: '49.8365'
Avg. expression score in LCM sample: '37.3621'
Tissue used: 'pure endosperm, no chalazal'
AT2G01320 ABCG7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.51259 x 10-1 18 3 20 21 85.71% 51.22% 21 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.490308'
Avg. expression score for this sample: '55.912'
Avg. expression score in LCM sample: '37.3621'
Tissue used: 'full endosperm'
AT2G01320 ABCG7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.77864 x 10-1 43 13 21 7 76.79% 25.00% 56 28 TAIR8 Avg. embryo expression (dissected): '110.932'
Avg. embryo expression (LCM): '95.2317'
AT2G01320 ABCG7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.1332 x 10-2 22 29 43.14% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G01310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G01310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G01310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.32432 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G01300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.4178 x 10-1 15 1 93.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.58524 x 10-1 9 1 90.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.84085 x 10-1 3 6 0 18 33.33% 100.00% 9 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.427865'
Avg. expression score for this sample: '8.10225'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G01300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 0 5 33.33% 100.00% 3 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.427865'
Avg. expression score for this sample: '3.8583'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G01290 RPI2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.09615 x 10-1 59 25 25 25 70.24% 50.00% 84 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.791774'
Avg. expression score for this sample: '146.839'
Avg. expression score in LCM sample: '50.2375'
Tissue used: 'pure endosperm, no chalazal'
AT2G01290 RPI2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.7 x 10-16 35 109 24.31% 144 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01290 RPI2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.83 x 10-4 241 108 57 28 69.05% 32.94% 349 85 TAIR8 Avg. embryo expression (dissected): '495.933'
Avg. embryo expression (LCM): '485'
AT2G01290 RPI2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.30429 x 10-1 17 8 68.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01290 RPI2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 50 14 36 53 78.12% 59.55% 64 89 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.791774'
Avg. expression score for this sample: '107.898'
Avg. expression score in LCM sample: '50.2375'
Tissue used: 'full endosperm'
AT2G01290 RPI2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1 x 10-7 152 24 86.36% 176 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01280 MEE65 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.79704 x 10-1 106 67 61.27% 173 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01280 MEE65 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.28202 x 10-1 46 63 28 141 42.20% 83.43% 109 169 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.857388'
Avg. expression score for this sample: '73.2978'
Avg. expression score in LCM sample: '34.1874'
Tissue used: 'full endosperm'
AT2G01280 MEE65 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.291 x 10-3 193 341 42 79 36.14% 65.29% 534 121 TAIR8 Avg. embryo expression (dissected): '299.601'
Avg. embryo expression (LCM): '287.102'
AT2G01280 MEE65 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.88505 x 10-1 72 83 38 153 46.45% 80.10% 155 191 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.857388'
Avg. expression score for this sample: '103.597'
Avg. expression score in LCM sample: '34.1874'
Tissue used: 'pure endosperm, no chalazal'
AT2G01280 MEE65 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.37524 x 10-1 107 50 68.15% 157 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01280 MEE65 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.1 x 10-5 49 4 92.45% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01275 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01275 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.31338'
Avg. expression score in LCM sample: '2.73381'
Tissue used: 'pure endosperm, no chalazal'
AT2G01275 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.62699'
Avg. expression score in LCM sample: '2.73381'
Tissue used: 'full endosperm'
AT2G01275 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Avg. embryo expression (dissected): '4.78261'
Avg. embryo expression (LCM): '5.8523'
AT2G01275 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01275 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01270 QSOX2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.7 x 10-5 128 17 88.28% 145 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01270 QSOX2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3576 x 10-2 133 32 80.61% 165 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01270 QSOX2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.21939 x 10-1 48 30 22 93 61.54% 80.87% 78 115 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.25435'
Avg. expression score for this sample: '142.8'
Avg. expression score in LCM sample: '410.895'
Tissue used: 'full endosperm'
AT2G01270 QSOX2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.5065 x 10-2 18 2 90.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01270 QSOX2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.10663 x 10-1 46 25 25 63 64.79% 71.59% 71 88 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.25435'
Avg. expression score for this sample: '166.379'
Avg. expression score in LCM sample: '410.895'
Tissue used: 'pure endosperm, no chalazal'
AT2G01270 QSOX2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.86499 x 10-1 22 32 20 35 40.74% 63.64% 54 55 TAIR8 Avg. embryo expression (dissected): '156.602'
Avg. embryo expression (LCM): '201.954'
AT2G01260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.30801 x 10-1 27 19 2 3 58.70% 60.00% 46 5 TAIR8 Avg. embryo expression (dissected): '27.2549'
Avg. embryo expression (LCM): '25.7828'
AT2G01260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.74676 x 10-1 22 4 84.62% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.89 x 10-4 59 3 95.16% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G01260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.07 x 10-4 90 28 44 179 76.27% 80.27% 118 223 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000287'
Avg. expression score for this sample: '79.4468'
Avg. expression score in LCM sample: '41.7127'
Tissue used: 'full endosperm'
AT2G01260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.57009 x 10-1 56 20 20 51 73.68% 71.83% 76 71 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000287'
Avg. expression score for this sample: '59.1757'
Avg. expression score in LCM sample: '41.7127'
Tissue used: 'pure endosperm, no chalazal'
AT2G01260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0999 x 10-2 65 8 89.04% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'