Displaying data sets 124201 - 124300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G02150 EMB2794 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 44 45 14 14 49.44% 50.00% 89 28 TAIR8 Avg. embryo expression (dissected): '87.2376'
Avg. embryo expression (LCM): '66.6609'
AT2G02150 EMB2794 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.27647 x 10-1 30 16 7 38 65.22% 84.44% 46 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.434337'
Avg. expression score for this sample: '42.7835'
Avg. expression score in LCM sample: '24.8983'
Tissue used: 'pure endosperm, no chalazal'
AT2G02150 EMB2794 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.37267 x 10-1 71 35 34 75 66.98% 68.81% 106 109 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.434337'
Avg. expression score for this sample: '60.2394'
Avg. expression score in LCM sample: '24.8983'
Tissue used: 'full endosperm'
AT2G02150 EMB2794 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.99 x 10-4 104 16 86.67% 120 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02150 EMB2794 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.311 x 10-3 174 37 82.46% 211 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02150 EMB2794 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.09986 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02147 LCR73 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02147 LCR73 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5419 x 10-2 0 4 7 2 0.00% 22.22% 4 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003275'
Avg. expression score for this sample: '48.1936'
Avg. expression score in LCM sample: '658.658'
Tissue used: 'full endosperm'
AT2G02147 LCR73 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '13.9308'
Avg. embryo expression (LCM): '5.21181'
AT2G02147 LCR73 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.1291 x 10-2 14 7 19 7 66.67% 26.92% 21 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003275'
Avg. expression score for this sample: '226.278'
Avg. expression score in LCM sample: '658.658'
Tissue used: 'pure endosperm, no chalazal'
AT2G02147 LCR73 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.2 x 10-5 587 321 64.65% 908 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02147 LCR73 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.9 x 10-6 1373 639 68.24% 2012 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02140 LCR72 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02140 LCR72 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02140 LCR72 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02140 LCR72 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.47239'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G02140 LCR72 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.97573'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G02140 LCR72 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G02130 LCR68 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.4863 x 10-1 80 117 32 46 40.61% 58.97% 197 78 TAIR8 Avg. embryo expression (dissected): '595.415'
Avg. embryo expression (LCM): '118.252'
AT2G02130 LCR68 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.8282 x 10-2 15 24 1 8 38.46% 88.89% 39 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000133'
Avg. expression score for this sample: '44.5722'
Avg. expression score in LCM sample: '2.76321'
Tissue used: 'pure endosperm, no chalazal'
AT2G02130 LCR68 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.205 x 10-3 33 57 14 28 36.67% 66.67% 90 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000133'
Avg. expression score for this sample: '89.156'
Avg. expression score in LCM sample: '2.76321'
Tissue used: 'full endosperm'
AT2G02130 LCR68 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.0 x 10-30 356 35 91.05% 391 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02130 LCR68 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1 x 10-18 88 3 96.70% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02130 LCR68 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.45588 x 10-1 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02120 PDF2.1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.22862 x 10-1 303 189 61.59% 492 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02120 PDF2.1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5 x 10-8 637 234 594 500 73.13% 45.70% 871 1094 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.4e-07'
Avg. expression score for this sample: '6117.75'
Avg. expression score in LCM sample: '1132.37'
Tissue used: 'full endosperm'
AT2G02120 PDF2.1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.21136 x 10-1 43 17 28 21 71.67% 42.86% 60 49 TAIR8 Avg. embryo expression (dissected): '326.664'
Avg. embryo expression (LCM): '12.2195'
AT2G02120 PDF2.1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.4619 x 10-2 1010 407 838 1209 71.28% 59.06% 1417 2047 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.4e-07'
Avg. expression score for this sample: '7253.19'
Avg. expression score in LCM sample: '1132.37'
Tissue used: 'pure endosperm, no chalazal'
AT2G02120 PDF2.1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.53407 x 10-1 15 12 55.56% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02120 PDF2.1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.17899 x 10-1 4 7 36.36% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02103 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02103 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02103 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02103 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.18381'
Avg. expression score in LCM sample: '1.05825'
Tissue used: 'pure endosperm, no chalazal'
AT2G02103 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.778184'
Avg. expression score in LCM sample: '1.05825'
Tissue used: 'full endosperm'
AT2G02103 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G02100 LCR69 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.23278 x 10-1 94 84 7 14 52.81% 66.67% 178 21 TAIR8 Avg. embryo expression (dissected): '18426.7'
Avg. embryo expression (LCM): '1558.57'
AT2G02100 LCR69 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.90922 x 10-1 1331 779 482 1104 63.08% 69.61% 2110 1586 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.0e-09'
Avg. expression score for this sample: '257082'
Avg. expression score in LCM sample: '71814.8'
Tissue used: 'pure endosperm, no chalazal'
AT2G02100 LCR69 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.7 x 10-10 2343 2030 1899 4205 53.58% 68.89% 4373 6104 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.0e-09'
Avg. expression score for this sample: '67074.3'
Avg. expression score in LCM sample: '71814.8'
Tissue used: 'full endosperm'
AT2G02100 LCR69 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.59685 x 10-1 21 13 61.76% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02100 LCR69 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.2 x 10-7 142 34 80.68% 176 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02100 LCR69 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 1319 378 77.73% 1697 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02090 ETL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.60745 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02090 ETL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 15 14 10 36 51.72% 78.26% 29 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.379772'
Avg. expression score for this sample: '271.583'
Avg. expression score in LCM sample: '195.218'
Tissue used: 'full endosperm'
AT2G02090 ETL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 9 2 3 43.75% 60.00% 16 5 TAIR8 Avg. embryo expression (dissected): '383.409'
Avg. embryo expression (LCM): '183.192'
AT2G02090 ETL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.57394 x 10-1 8 2 4 18 80.00% 81.82% 10 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.379772'
Avg. expression score for this sample: '380.841'
Avg. expression score in LCM sample: '195.218'
Tissue used: 'pure endosperm, no chalazal'
AT2G02090 ETL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.59009 x 10-1 40 8 83.33% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02090 ETL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.49252 x 10-1 39 13 75.00% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02080 IDD4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.9 x 10-17 147 1 99.32% 148 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02080 IDD4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 x 10-22 235 3 98.74% 238 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02080 IDD4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.3271 x 10-1 20 10 66.67% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02080 IDD4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 67 47 9 44 58.77% 83.02% 114 53 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.063822'
Avg. expression score for this sample: '220.79'
Avg. expression score in LCM sample: '80.6769'
Tissue used: 'pure endosperm, no chalazal'
AT2G02080 IDD4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.1169 x 10-2 140 35 48 110 80.00% 69.62% 175 158 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.063822'
Avg. expression score for this sample: '292.006'
Avg. expression score in LCM sample: '80.6769'
Tissue used: 'full endosperm'
AT2G02080 IDD4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.79932 x 10-1 54 79 37 38 40.60% 50.67% 133 75 TAIR8 Avg. embryo expression (dissected): '403.304'
Avg. embryo expression (LCM): '184.963'
AT2G02070 IDD5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.77985 x 10-1 14 48 5 26 22.58% 83.87% 62 31 TAIR8 Avg. embryo expression (dissected): '681.513'
Avg. embryo expression (LCM): '481.421'
AT2G02070 IDD5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 14 21 5 42 40.00% 89.36% 35 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.719031'
Avg. expression score for this sample: '566.732'
Avg. expression score in LCM sample: '294.928'
Tissue used: 'pure endosperm, no chalazal'
AT2G02070 IDD5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.30316 x 10-1 15 11 12 40 57.69% 76.92% 26 52 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.719031'
Avg. expression score for this sample: '320.812'
Avg. expression score in LCM sample: '294.928'
Tissue used: 'full endosperm'
AT2G02070 IDD5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02070 IDD5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.4987 x 10-2 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02070 IDD5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.83851 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02061 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02061 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.557901'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G02061 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.72482 x 10-1 9 8 2 4 52.94% 66.67% 17 6 TAIR8 Avg. embryo expression (dissected): '9.11202'
Avg. embryo expression (LCM): '5.13646'
AT2G02061 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 2 0.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.845329'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G02061 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.33333 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02061 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.00961'
Avg. expression score in LCM sample: '1.4404'
Tissue used: 'pure endosperm, no chalazal'
AT2G02060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.339899'
Avg. expression score in LCM sample: '1.4404'
Tissue used: 'full endosperm'
AT2G02060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.50034 x 10-1 5 7 5 14 41.67% 73.68% 12 19 TAIR8 Avg. embryo expression (dissected): '36.3055'
Avg. embryo expression (LCM): '41.6945'
AT2G02050 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 3 1 0 62.50% 0.00% 8 1 TAIR8 Avg. embryo expression (dissected): '481.381'
Avg. embryo expression (LCM): '443.933'
AT2G02050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 2 0 3 50.00% 100.00% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.033774'
Avg. expression score for this sample: '389.391'
Avg. expression score in LCM sample: '230.155'
Tissue used: 'pure endosperm, no chalazal'
AT2G02050 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.5829 x 10-2 14 3 2 24 82.35% 92.31% 17 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.033774'
Avg. expression score for this sample: '347.712'
Avg. expression score in LCM sample: '230.155'
Tissue used: 'full endosperm'
AT2G02050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.66934 x 10-1 8 3 72.73% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02050 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 16 2 88.89% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.33 x 10-4 3 7 30.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02040 PTR2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.14662 x 10-1 17 1 94.44% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02040 PTR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.42243 x 10-1 17 8 8 42 68.00% 84.00% 25 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.194462'
Avg. expression score for this sample: '104.51'
Avg. expression score in LCM sample: '48.5472'
Tissue used: 'full endosperm'
AT2G02040 PTR2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.62554 x 10-1 4 12 1 5 25.00% 83.33% 16 6 TAIR8 Avg. embryo expression (dissected): '67.4935'
Avg. embryo expression (LCM): '33.3179'
AT2G02040 PTR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 5 1 10 37.50% 90.91% 8 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.194462'
Avg. expression score for this sample: '81.0055'
Avg. expression score in LCM sample: '48.5472'
Tissue used: 'pure endosperm, no chalazal'
AT2G02040 PTR2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 31 9 77.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02040 PTR2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3183 x 10-2 36 2 94.74% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02030 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02030 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02030 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.81808'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G02030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.833144'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G02030 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.289453'
Avg. embryo expression (LCM): '0'
AT2G02026 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G02026 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G02026 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G02026 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02026 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02026 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02020 PTR4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02020 PTR4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.106241'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G02020 PTR4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G02020 PTR4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.150566'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'