| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT2G02580 | CYP71B9 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.704663' Avg. embryo expression (LCM): '0' |
||||
| AT2G02580 | CYP71B9 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.43102 x 10-1 | 394 | 3 | 99.24% | 397 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G02570 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.2 x 10-9 | 189 | 21 | 90.00% | 210 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02570 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.75194 x 10-1 | 34 | 27 | 12 | 8 | 55.74% | 40.00% | 61 | 20 | TAIR8 |
Avg. embryo expression (dissected): '238.745' Avg. embryo expression (LCM): '219.511' |
||||
| AT2G02570 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.65 x 10-4 | 135 | 25 | 84.38% | 160 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02570 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.732 x 10-2 | 114 | 40 | 52 | 144 | 74.03% | 73.47% | 154 | 196 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.325757' Avg. expression score for this sample: '417.936' Avg. expression score in LCM sample: '117.084' Tissue used: 'full endosperm' |
|||||
| AT2G02570 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.83811 x 10-1 | 31 | 22 | 27 | 39 | 58.49% | 59.09% | 53 | 66 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.325757' Avg. expression score for this sample: '221.004' Avg. expression score in LCM sample: '117.084' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G02570 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 23 | 10 | 69.70% | 33 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02560 | CAND1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.3439 x 10-2 | 78 | 19 | 80.41% | 97 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G02560 | CAND1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.94871 x 10-1 | 85 | 43 | 54 | 120 | 66.41% | 68.97% | 128 | 174 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.164147' Avg. expression score for this sample: '122.617' Avg. expression score in LCM sample: '137.69' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G02560 | CAND1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.40436 x 10-1 | 189 | 88 | 77 | 213 | 68.23% | 73.45% | 277 | 290 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.164147' Avg. expression score for this sample: '170.493' Avg. expression score in LCM sample: '137.69' Tissue used: 'full endosperm' |
||||
| AT2G02560 | CAND1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.06325 x 10-1 | 502 | 243 | 67.38% | 745 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G02560 | CAND1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.8569 x 10-2 | 81 | 66 | 16 | 40 | 55.10% | 71.43% | 147 | 56 | TAIR8 |
Avg. embryo expression (dissected): '132.867' Avg. embryo expression (LCM): '167.054' |
|||
| AT2G02560 | CAND1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.1 x 10-5 | 477 | 126 | 79.10% | 603 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G02550 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G02550 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.472068' Avg. embryo expression (LCM): '0' |
|||||
| AT2G02550 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G02550 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT2G02550 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G02550 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G02540 | HB21 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02540 | HB21 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.50902' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G02540 | HB21 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '2.68549' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT2G02540 | HB21 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02540 | HB21 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '55.2101' Avg. embryo expression (LCM): '29.2364' |
|||||
| AT2G02540 | HB21 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02520 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.5641 x 10-2 | 3 | 8 | 27.27% | 11 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02520 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.457921' Avg. embryo expression (LCM): '0' |
||||||
| AT2G02520 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 13 | 2 | 86.67% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02520 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.444444' Avg. expression score for this sample: '1.05444' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT2G02520 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.444444' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G02520 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G02515 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G02515 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.77234 x 10-1 | 8 | 5 | 7 | 7 | 61.54% | 50.00% | 13 | 14 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '45.851' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G02515 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.58483 x 10-1 | 2 | 9 | 4 | 34 | 18.18% | 89.47% | 11 | 38 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '48.6321' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT2G02515 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.25342 x 10-1 | 2599 | 1080 | 70.64% | 3679 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02515 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.725803' Avg. embryo expression (LCM): '0' |
||||||
| AT2G02515 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.35793 x 10-1 | 1685 | 1125 | 59.96% | 2810 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02510 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.9 x 10-7 | 201 | 34 | 85.53% | 235 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02510 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 9.47658 x 10-1 | 182 | 160 | 70 | 52 | 53.22% | 42.62% | 342 | 122 | TAIR8 |
Avg. embryo expression (dissected): '511.732' Avg. embryo expression (LCM): '500.849' |
||||
| AT2G02510 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.76498 x 10-1 | 153 | 73 | 67.70% | 226 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02510 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0283 x 10-2 | 148 | 42 | 58 | 153 | 77.89% | 72.51% | 190 | 211 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.093543' Avg. expression score for this sample: '246.68' Avg. expression score in LCM sample: '460.765' Tissue used: 'full endosperm' |
|||||
| AT2G02510 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.23285 x 10-1 | 268 | 129 | 108 | 220 | 67.51% | 67.07% | 397 | 328 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.093543' Avg. expression score for this sample: '518.072' Avg. expression score in LCM sample: '460.765' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G02510 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 69 | 29 | 70.41% | 98 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02500 | ISPD | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.23436 x 10-1 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G02500 | ISPD | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 5 | 3 | 5 | 8 | 62.50% | 61.54% | 8 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.539468' Avg. expression score for this sample: '17.8222' Avg. expression score in LCM sample: '7.98097' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G02500 | ISPD | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.84773 x 10-1 | 5 | 4 | 3 | 24 | 55.56% | 88.89% | 9 | 27 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.539468' Avg. expression score for this sample: '32.338' Avg. expression score in LCM sample: '7.98097' Tissue used: 'full endosperm' |
||||
| AT2G02500 | ISPD | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 16 | 6 | 72.73% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G02500 | ISPD | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.43374 x 10-1 | 9 | 6 | 2 | 5 | 60.00% | 71.43% | 15 | 7 | TAIR8 |
Avg. embryo expression (dissected): '33.5191' Avg. embryo expression (LCM): '113.756' |
|||
| AT2G02500 | ISPD | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.61013 x 10-1 | 12 | 6 | 66.67% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G02490 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.195 x 10-3 | 1109 | 152 | 87.95% | 1261 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02490 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.233565' Avg. embryo expression (LCM): '2.02193' |
|||||
| AT2G02490 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.08405 x 10-1 | 2282 | 619 | 78.66% | 2901 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02490 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 8 | 8 | 4 | 12 | 50.00% | 75.00% | 16 | 16 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '5.86918' Avg. expression score in LCM sample: '1.17583' Tissue used: 'full endosperm' |
|||||
| AT2G02490 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.44444 x 10-1 | 5 | 0 | 0 | 0 | 100.00% | 5 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.03144' Avg. expression score in LCM sample: '1.17583' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT2G02490 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.42105 x 10-1 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02480 | STI | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.07635 x 10-1 | 109 | 51 | 68.12% | 160 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G02480 | STI | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.50317 x 10-1 | 295 | 178 | 182 | 361 | 62.37% | 66.48% | 473 | 543 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.05273' Avg. expression score for this sample: '98.5525' Avg. expression score in LCM sample: '66.4934' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G02480 | STI | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 9.5135 x 10-2 | 368 | 219 | 289 | 518 | 62.69% | 64.19% | 587 | 807 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.05273' Avg. expression score for this sample: '115.108' Avg. expression score in LCM sample: '66.4934' Tissue used: 'full endosperm' |
||||
| AT2G02480 | STI | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.7 x 10-19 | 192 | 17 | 91.87% | 209 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G02480 | STI | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.89153 x 10-1 | 451 | 406 | 208 | 185 | 52.63% | 47.07% | 857 | 393 | TAIR8 |
Avg. embryo expression (dissected): '210.058' Avg. embryo expression (LCM): '137.793' |
|||
| AT2G02480 | STI | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.952 x 10-3 | 172 | 135 | 56.03% | 307 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G02470 | AL6 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 9.912 x 10-3 | 38 | 5 | 88.37% | 43 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G02470 | AL6 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.35902 x 10-1 | 10 | 6 | 2 | 3 | 62.50% | 60.00% | 16 | 5 | TAIR8 |
Avg. embryo expression (dissected): '520.685' Avg. embryo expression (LCM): '441.509' |
|||
| AT2G02470 | AL6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.09687 x 10-1 | 25 | 13 | 65.79% | 38 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G02470 | AL6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.20843 x 10-1 | 67 | 32 | 40 | 96 | 67.68% | 70.59% | 99 | 136 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.582229' Avg. expression score for this sample: '468.249' Avg. expression score in LCM sample: '116.069' Tissue used: 'full endosperm' |
||||
| AT2G02470 | AL6 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 14 | 4 | 8 | 12 | 77.78% | 60.00% | 18 | 20 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.582229' Avg. expression score for this sample: '530.462' Avg. expression score in LCM sample: '116.069' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G02470 | AL6 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.90884 x 10-1 | 9 | 1 | 90.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G02450 | LOV1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02450 | LOV1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.4 | 0 | 3 | 0 | 0 | 0.00% | 3 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.010358' Avg. expression score for this sample: '1.7801' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G02450 | LOV1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.275 x 10-3 | 44 | 3 | 2 | 7 | 93.62% | 77.78% | 47 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.010358' Avg. expression score for this sample: '12.3358' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||
| AT2G02450 | LOV1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G02450 | LOV1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.9852 x 10-1 | 27 | 14 | 15 | 9 | 65.85% | 37.50% | 41 | 24 | TAIR8 |
Avg. embryo expression (dissected): '57.0938' Avg. embryo expression (LCM): '7.72353' |
|||
| AT2G02450 | LOV1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02440 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G02440 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT2G02440 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G02440 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.437024' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT2G02440 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G02440 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G02410 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT2G02410 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '12.9373' Avg. expression score in LCM sample: '2.30757' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT2G02410 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 0 | 1 | 2 | 100.00% | 66.67% | 2 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '23.0366' Avg. expression score in LCM sample: '2.30757' Tissue used: 'full endosperm' |
|||||
| AT2G02410 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02410 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '27.515' Avg. embryo expression (LCM): '14.7563' |
|||||
| AT2G02410 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 2 | 71.43% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02400 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.62389 x 10-1 | 54 | 9 | 85.71% | 63 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02400 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.28308 x 10-1 | 6 | 3 | 1 | 3 | 66.67% | 75.00% | 9 | 4 | TAIR8 |
Avg. embryo expression (dissected): '19.9539' Avg. embryo expression (LCM): '18.9635' |
||||
| AT2G02400 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.97052 x 10-1 | 140 | 43 | 76.50% | 183 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02400 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.7498 x 10-2 | 34 | 9 | 19 | 69 | 79.07% | 78.41% | 43 | 88 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.024698' Avg. expression score for this sample: '38.6942' Avg. expression score in LCM sample: '42.0654' Tissue used: 'full endosperm' |
|||||
| AT2G02400 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.66355 x 10-1 | 7 | 2 | 5 | 13 | 77.78% | 72.22% | 9 | 18 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.024698' Avg. expression score for this sample: '23.2308' Avg. expression score in LCM sample: '42.0654' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT2G02400 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.9239 x 10-2 | 27 | 1 | 96.43% | 28 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT2G02390 | GSTZ1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G02390 | GSTZ1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 0 | 1 | 3 | 100.00% | 75.00% | 1 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.202126' Avg. expression score for this sample: '55.5626' Avg. expression score in LCM sample: '4.73273' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT2G02390 | GSTZ1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.80579 x 10-1 | 7 | 2 | 1 | 12 | 77.78% | 92.31% | 9 | 13 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.202126' Avg. expression score for this sample: '181.521' Avg. expression score in LCM sample: '4.73273' Tissue used: 'full endosperm' |
||||
| AT2G02390 | GSTZ1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 12 | 1 | 92.31% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G02390 | GSTZ1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Avg. embryo expression (dissected): '38.6046' Avg. embryo expression (LCM): '12.1441' |
||||
| AT2G02390 | GSTZ1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.38327 x 10-1 | 18 | 0 | 100.00% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G02380 | GSTZ2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 8 | 1 | 88.89% | 9 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT2G02380 | GSTZ2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.360649' Avg. embryo expression (LCM): '1.55726' |