GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G162154	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.247579 x 10^-1	582	266	409	524	68.63%	56.16%	848	933	RefGen V2	χ2 p-value for B73 x Mo17: '.2247579' χ2 p-value for Mo17 x B73: '1.00e-11' Biased in favor of strain: ''
GRMZM2G162154	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.17355 x 10^-2	326	248	344	281	56.79%	44.96%	574	625	RefGen V2	χ2 p-value for B73 x Mo17: '.0011313' χ2 p-value for Mo17 x B73: '.0117355' Biased in favor of strain: 'B73'
GRMZM2G162127	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1446	207	1734	215	87.48%	11.03%	1653	1949	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G162127	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.47 x 10^-5	116	22	51	22	84.06%	30.14%	138	73	RefGen V2	χ2 p-value for B73 x Mo17: '.0000147' χ2 p-value for Mo17 x B73: '3.57e-11' Biased in favor of strain: 'B73'
GRMZM2G162109	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	0	0	100.00%		4	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G162109	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	0	0	100.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G162086	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.78251 x 10^-2	186	129	129	103	59.05%	44.40%	315	232	RefGen V2	χ2 p-value for B73 x Mo17: '.00132' χ2 p-value for Mo17 x B73: '.0878251' Biased in favor of strain: ''
GRMZM2G162086	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	4	10	3	20.00%	23.08%	5	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0268555' χ2 p-value for Mo17 x B73: '.0008561' Biased in favor of strain: ''
GRMZM2G162082	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.48 x 10^-5	246	70	151	135	77.85%	47.20%	316	286	RefGen V2	χ2 p-value for B73 x Mo17: '.0000248' χ2 p-value for Mo17 x B73: '2.90e-12' Biased in favor of strain: 'B73'
GRMZM2G162082	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.14 x 10^-5	130	66	104	52	66.33%	33.33%	196	156	RefGen V2	χ2 p-value for B73 x Mo17: '4.84e-06' χ2 p-value for Mo17 x B73: '.0000314' Biased in favor of strain: 'B73'
GRMZM2G162079	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.3 x 10^-5	396	285	360	255	58.15%	41.46%	681	615	RefGen V2	χ2 p-value for B73 x Mo17: '.000021' χ2 p-value for Mo17 x B73: '.000023' Biased in favor of strain: 'B73'
GRMZM2G162079	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.399933 x 10^-1	379	160	154	294	70.32%	65.62%	539	448	RefGen V2	χ2 p-value for B73 x Mo17: '.0723557' χ2 p-value for Mo17 x B73: '.6399933' Biased in favor of strain: ''
GRMZM2G162052	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.16 x 10^-19	378	58	231	112	86.70%	32.65%	436	343	RefGen V2	χ2 p-value for B73 x Mo17: '7.16e-19' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G162052	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.91 x 10^-8	144	39	126	52	78.69%	29.21%	183	178	RefGen V2	χ2 p-value for B73 x Mo17: '8.37e-15' χ2 p-value for Mo17 x B73: '2.91e-08' Biased in favor of strain: 'B73'
GRMZM2G162020	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.465719 x 10^-1	111	136	114	137	44.94%	54.58%	247	251	RefGen V2	χ2 p-value for B73 x Mo17: '.1116744' χ2 p-value for Mo17 x B73: '.1465719' Biased in favor of strain: ''
GRMZM2G162020	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G162007	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.5656 x 10^-3	100	25	71	78	80.00%	52.35%	125	149	RefGen V2	χ2 p-value for B73 x Mo17: '.0015656' χ2 p-value for Mo17 x B73: '.0002094' Biased in favor of strain: 'B73'
GRMZM2G162007	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.75562 x 10^-2	73	53	61	43	57.94%	41.35%	126	104	RefGen V2	χ2 p-value for B73 x Mo17: '.0747914' χ2 p-value for Mo17 x B73: '.0775562' Biased in favor of strain: ''
GRMZM2G161988	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1831 x 10^-3	195	136	156	101	58.91%	39.30%	331	257	RefGen V2	χ2 p-value for B73 x Mo17: '.0011831' χ2 p-value for Mo17 x B73: '.0006018' Biased in favor of strain: 'B73'
GRMZM2G161988	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.52057 x 10^-2	71	24	59	54	74.74%	47.79%	95	113	RefGen V2	χ2 p-value for B73 x Mo17: '.0952057' χ2 p-value for Mo17 x B73: '.0000207' Biased in favor of strain: ''
GRMZM2G161969	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.642 x 10^-4	548	207	359	422	72.58%	54.03%	755	781	RefGen V2	χ2 p-value for B73 x Mo17: '.0005642' χ2 p-value for Mo17 x B73: '6.92e-14' Biased in favor of strain: 'B73'
GRMZM2G161969	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.61455 x 10^-2	289	345	238	306	45.58%	56.25%	634	544	RefGen V2	χ2 p-value for B73 x Mo17: '.0261455' χ2 p-value for Mo17 x B73: '.0035515' Biased in favor of strain: 'Mo17'
GRMZM2G161938	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	4	10	5	42.86%	33.33%	7	15	RefGen V2	χ2 p-value for B73 x Mo17: '.705457' χ2 p-value for Mo17 x B73: '.1967056' Biased in favor of strain: ''
GRMZM2G161938	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	2	7	5	33.33%	41.67%	3	12	RefGen V2	χ2 p-value for B73 x Mo17: '.2206667' χ2 p-value for Mo17 x B73: '.0661925' Biased in favor of strain: ''
GRMZM2G161932	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.81 x 10^-8	87	6	34	6	93.55%	15.00%	93	40	RefGen V2	χ2 p-value for B73 x Mo17: '3.81e-08' χ2 p-value for Mo17 x B73: '4.15e-12' Biased in favor of strain: 'B73'
GRMZM2G161932	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.76 x 10^-9	97	30	115	29	76.38%	20.14%	127	144	RefGen V2	χ2 p-value for B73 x Mo17: '2.76e-09' χ2 p-value for Mo17 x B73: '7.68e-13' Biased in favor of strain: 'B73'
GRMZM2G161918	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	0	0	100.00%		4	0	RefGen V2	χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G161918	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	0	2	1	100.00%	33.33%	8	3	RefGen V2	χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: ''
GRMZM2G161913	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.68 x 10^-13	164	14	150	36	92.13%	19.35%	178	186	RefGen V2	χ2 p-value for B73 x Mo17: '5.68e-13' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G161913	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.39 x 10^-16	166	25	104	15	86.91%	12.61%	191	119	RefGen V2	χ2 p-value for B73 x Mo17: '1.93e-24' χ2 p-value for Mo17 x B73: '3.39e-16' Biased in favor of strain: 'B73'
GRMZM2G161905	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.287333 x 10^-1	18	27	29	34	40.00%	53.97%	45	63	RefGen V2	χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.5287333' Biased in favor of strain: ''
GRMZM2G161905	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	5	4	5	58.33%	55.56%	12	9	RefGen V2	χ2 p-value for B73 x Mo17: '.5402792' χ2 p-value for Mo17 x B73: '.4795' Biased in favor of strain: ''
GRMZM2G161868	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	11118	4147	5812	8486	72.83%	59.35%	15265	14298	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G161868	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.909908 x 10^-1	2512	1636	2667	2657	60.56%	49.91%	4148	5324	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.8909908' Biased in favor of strain: ''
GRMZM2G161846	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.37094 x 10^-1	19	23	14	19	45.24%	57.58%	42	33	RefGen V2	χ2 p-value for B73 x Mo17: '.537094' χ2 p-value for Mo17 x B73: '.3840882' Biased in favor of strain: ''
GRMZM2G161846	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.38948 x 10^-2	61	4	18	18	93.85%	50.00%	65	36	RefGen V2	χ2 p-value for B73 x Mo17: '3.35e-06' χ2 p-value for Mo17 x B73: '.0338948' Biased in favor of strain: ''
GRMZM2G161827	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G161827	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	3	7	5	5	30.00%	50.00%	10	10	RefGen V2	χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G161809	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.056789 x 10^-1	90	59	93	82	60.40%	46.86%	149	175	RefGen V2	χ2 p-value for B73 x Mo17: '.0110973' χ2 p-value for Mo17 x B73: '.4056789' Biased in favor of strain: ''
GRMZM2G161809	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.7309 x 10^-2	33	28	4	28	54.10%	87.50%	61	32	RefGen V2	χ2 p-value for B73 x Mo17: '.037309' χ2 p-value for Mo17 x B73: '.0124193' Biased in favor of strain: ''
GRMZM2G161800	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.808599 x 10^-1	29	12	20	23	70.73%	53.49%	41	43	RefGen V2	χ2 p-value for B73 x Mo17: '.5808599' χ2 p-value for Mo17 x B73: '.0667792' Biased in favor of strain: ''
GRMZM2G161800	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.92207 x 10^-1	24	29	12	17	45.28%	58.62%	53	29	RefGen V2	χ2 p-value for B73 x Mo17: '.492207' χ2 p-value for Mo17 x B73: '.3531604' Biased in favor of strain: ''
GRMZM2G161792	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	0	4	0	100.00%	0.00%	7	4	RefGen V2	χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G161792	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	4	0	100.00%	0.00%	2	4	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM2G161787	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.556684 x 10^-1	430	190	291	367	69.35%	55.78%	620	658	RefGen V2	χ2 p-value for B73 x Mo17: '.1556684' χ2 p-value for Mo17 x B73: '3.09e-09' Biased in favor of strain: ''
GRMZM2G161787	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.7451 x 10^-3	80	45	77	37	64.00%	32.46%	125	114	RefGen V2	χ2 p-value for B73 x Mo17: '.0017451' χ2 p-value for Mo17 x B73: '.0001794' Biased in favor of strain: 'B73'
GRMZM2G161728	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.94535 x 10^-2	114	54	76	57	67.86%	42.86%	168	133	RefGen V2	χ2 p-value for B73 x Mo17: '3.67e-06' χ2 p-value for Mo17 x B73: '.0994535' Biased in favor of strain: ''
GRMZM2G161728	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.298 x 10^-4	438	121	229	341	78.35%	59.82%	559	570	RefGen V2	χ2 p-value for B73 x Mo17: '4.58e-09' χ2 p-value for Mo17 x B73: '.0005298' Biased in favor of strain: 'B73'
GRMZM2G161680	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	PEG	0.0	5	137	250	8	3.52%	3.10%	142	258	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: ''
GRMZM2G161680	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.647058 x 10^-1	54	86	103	84	38.57%	44.92%	140	187	RefGen V2	χ2 p-value for B73 x Mo17: '.0068409' χ2 p-value for Mo17 x B73: '.1647058' Biased in favor of strain: ''
GRMZM2G161673	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.72903 x 10^-2	34	17	47	17	66.67%	26.56%	51	64	RefGen V2	χ2 p-value for B73 x Mo17: '.0172903' χ2 p-value for Mo17 x B73: '.0001768' Biased in favor of strain: 'B73'
GRMZM2G161673	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		11	2	3	0	84.62%	0.00%	13	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1698144' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G161668	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.13732 x 10^-2	49	14	20	22	77.78%	52.38%	63	42	RefGen V2	χ2 p-value for B73 x Mo17: '.0613732' χ2 p-value for Mo17 x B73: '.0495346' Biased in favor of strain: ''
GRMZM2G161668	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.348273 x 10^-1	25	11	12	11	69.44%	47.83%	36	23	RefGen V2	χ2 p-value for B73 x Mo17: '.0196307' χ2 p-value for Mo17 x B73: '.8348273' Biased in favor of strain: ''
GRMZM2G161666	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	3	3	6	25.00%	66.67%	4	9	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G161666	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	3.8 x 10^-8	15	35	123	28	30.00%	18.54%	50	151	RefGen V2	χ2 p-value for B73 x Mo17: '3.80e-08' χ2 p-value for Mo17 x B73: '4.26e-36' Biased in favor of strain: ''
GRMZM2G161664	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.29505 x 10^-2	68	19	51	35	78.16%	40.70%	87	86	RefGen V2	χ2 p-value for B73 x Mo17: '.0229505' χ2 p-value for Mo17 x B73: '3.24e-07' Biased in favor of strain: ''
GRMZM2G161664	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.665 x 10^-4	226	157	177	117	59.01%	39.80%	383	294	RefGen V2	χ2 p-value for B73 x Mo17: '.0004223' χ2 p-value for Mo17 x B73: '.0004665' Biased in favor of strain: 'B73'
GRMZM2G161658	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1255	576	1357	581	68.54%	29.98%	1831	1938	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G161658	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.15526 x 10^-2	83	61	73	73	57.64%	50.00%	144	146	RefGen V2	χ2 p-value for B73 x Mo17: '.0215526' χ2 p-value for Mo17 x B73: '.0000194' Biased in favor of strain: ''
GRMZM2G161643	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.71 x 10^-10	108	7	80	13	93.91%	13.98%	115	93	RefGen V2	χ2 p-value for B73 x Mo17: '5.71e-10' χ2 p-value for Mo17 x B73: '4.35e-27' Biased in favor of strain: 'B73'
GRMZM2G161643	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	731	67	784	78	91.60%	9.05%	798	862	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G161641	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.568392 x 10^-1	29	2	11	17	93.55%	60.71%	31	28	RefGen V2	χ2 p-value for B73 x Mo17: '1.24e-06' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: ''
GRMZM2G161641	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.95 x 10^-19	591	127	102	37	82.31%	26.62%	718	139	RefGen V2	χ2 p-value for B73 x Mo17: '5.95e-19' χ2 p-value for Mo17 x B73: '1.30e-23' Biased in favor of strain: 'B73'
GRMZM2G161619	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	3	2	100.00%	40.00%	3	5	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: ''
GRMZM2G161619	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	5	2	2	44.44%	50.00%	9	4	RefGen V2	χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G161611	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	2	1	100.00%	33.33%	3	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G161611	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G161610	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	1.01 x 10^-8	2	20	90	30	9.09%	25.00%	22	120	RefGen V2	χ2 p-value for B73 x Mo17: '1.01e-08' χ2 p-value for Mo17 x B73: '3.58e-22' Biased in favor of strain: ''
GRMZM2G161610	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.77 x 10^-10	8	61	35	180	11.59%	83.72%	69	215	RefGen V2	χ2 p-value for B73 x Mo17: '1.77e-10' χ2 p-value for Mo17 x B73: '4.65e-23' Biased in favor of strain: 'Mo17'
GRMZM2G161587	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.270892 x 10^-1	42	48	25	30	46.67%	54.55%	90	55	RefGen V2	χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.5001842' Biased in favor of strain: ''
GRMZM2G161587	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.959648 x 10^-1	25	9	27	16	73.53%	37.21%	34	43	RefGen V2	χ2 p-value for B73 x Mo17: '.3959648' χ2 p-value for Mo17 x B73: '.0000417' Biased in favor of strain: ''
GRMZM2G161566	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	967	422	1421	700	69.62%	33.00%	1389	2121	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G161566	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.01849 x 10^-2	49	10	27	34	83.05%	55.74%	59	61	RefGen V2	χ2 p-value for B73 x Mo17: '.0075933' χ2 p-value for Mo17 x B73: '.0701849' Biased in favor of strain: ''
GRMZM2G161560	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	8.882 x 10^-4	982	584	860	1335	62.71%	60.82%	1566	2195	RefGen V2	χ2 p-value for B73 x Mo17: '.0008882' χ2 p-value for Mo17 x B73: '6.22e-09' Biased in favor of strain: ''
GRMZM2G161560	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.42 x 10^-17	2933	2330	4287	3055	55.73%	41.61%	5263	7342	RefGen V2	χ2 p-value for B73 x Mo17: '9.42e-17' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G161553	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	0	100.00%		3	0	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G161553	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	2	0		0.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G161544	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.77829 x 10^-2	36	9	22	19	80.00%	46.34%	45	41	RefGen V2	χ2 p-value for B73 x Mo17: '.0577829' χ2 p-value for Mo17 x B73: '.0057662' Biased in favor of strain: ''
GRMZM2G161544	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.9876 x 10^-3	68	32	55	27	68.00%	32.93%	100	82	RefGen V2	χ2 p-value for B73 x Mo17: '.0003182' χ2 p-value for Mo17 x B73: '.0019876' Biased in favor of strain: 'B73'
GRMZM2G161540	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	2		66.67%	0	3	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G161540	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	0	0.00%		2	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G161534	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.94 x 10^-5	60	6	24	11	90.91%	31.43%	66	35	RefGen V2	χ2 p-value for B73 x Mo17: '.0000294' χ2 p-value for Mo17 x B73: '9.76e-06' Biased in favor of strain: 'B73'
GRMZM2G161534	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.270892 x 10^-1	6	4	12	8	60.00%	40.00%	10	20	RefGen V2	χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.3710934' Biased in favor of strain: ''
GRMZM2G161507	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		12	0	8	0	100.00%	0.00%	12	8	RefGen V2	χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: ''
GRMZM2G161507	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.1701 x 10^-3	15	0	11	0	100.00%	0.00%	15	11	RefGen V2	χ2 p-value for B73 x Mo17: '.0061701' χ2 p-value for Mo17 x B73: '2.73e-06' Biased in favor of strain: 'B73'
GRMZM2G161506	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.788456 x 10^-1	127	59	33	72	68.28%	68.57%	186	105	RefGen V2	χ2 p-value for B73 x Mo17: '.640811' χ2 p-value for Mo17 x B73: '.6788456' Biased in favor of strain: ''
GRMZM2G161506	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.014 x 10^-4	104	58	135	76	64.20%	36.02%	162	211	RefGen V2	χ2 p-value for B73 x Mo17: '.0003014' χ2 p-value for Mo17 x B73: '.0000487' Biased in favor of strain: 'B73'
GRMZM2G161493	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.39 x 10^-6	515	216	325	218	70.45%	40.15%	731	543	RefGen V2	χ2 p-value for B73 x Mo17: '1.98e-28' χ2 p-value for Mo17 x B73: '4.39e-06' Biased in favor of strain: 'B73'
GRMZM2G161493	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.05 x 10^-6	846	296	480	733	74.08%	60.43%	1142	1213	RefGen V2	χ2 p-value for B73 x Mo17: '1.07e-07' χ2 p-value for Mo17 x B73: '4.05e-06' Biased in favor of strain: 'B73'
GRMZM2G161491	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	0	8	1	100.00%	11.11%	9	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0338955' χ2 p-value for Mo17 x B73: '.000407' Biased in favor of strain: ''
GRMZM2G161491	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.18 x 10^-23	106	1	98	0	99.07%	0.00%	107	98	RefGen V2	χ2 p-value for B73 x Mo17: '3.29e-24' χ2 p-value for Mo17 x B73: '4.18e-23' Biased in favor of strain: 'B73'
GRMZM2G161472	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	1	0	1	66.67%	100.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G161472	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	1	0.00%	100.00%	2	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G161459	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G161459	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	3		100.00%	0	3	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM2G161450	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.69698 x 10^-1	54	51	29	41	51.43%	58.57%	105	70	RefGen V2	χ2 p-value for B73 x Mo17: '.769698' χ2 p-value for Mo17 x B73: '.151494' Biased in favor of strain: ''
GRMZM2G161450	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999996 x 10^-1	52	21	17	34	71.23%	66.67%	73	51	RefGen V2	χ2 p-value for B73 x Mo17: '.4079151' χ2 p-value for Mo17 x B73: '.9999996' Biased in favor of strain: ''
GRMZM2G161435	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	3	0	100.00%	0.00%	4	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1573006' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: ''
GRMZM2G161435	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.33422 x 10^-2	20	8	21	8	71.43%	27.59%	28	29	RefGen V2	χ2 p-value for B73 x Mo17: '.0233422' χ2 p-value for Mo17 x B73: '.0157768' Biased in favor of strain: 'B73'

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