Displaying data sets 123701 - 123800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G03090 EXPA15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.82856 x 10-1 57 62 105 256 47.90% 70.91% 119 361 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.639153'
Avg. expression score for this sample: '600.99'
Avg. expression score in LCM sample: '2.17529'
Tissue used: 'full endosperm'
AT2G03090 EXPA15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 4 2 5 55.56% 71.43% 9 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.639153'
Avg. expression score for this sample: '132.853'
Avg. expression score in LCM sample: '2.17529'
Tissue used: 'pure endosperm, no chalazal'
AT2G03070 MED8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.20536 x 10-1 105 29 48 42 78.36% 46.67% 134 90 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.064132'
Avg. expression score for this sample: '170.617'
Avg. expression score in LCM sample: '82.2495'
Tissue used: 'pure endosperm, no chalazal'
AT2G03070 MED8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.3099 x 10-1 78 51 25 17 60.47% 40.48% 129 42 TAIR8 Avg. embryo expression (dissected): '264.589'
Avg. embryo expression (LCM): '112.073'
AT2G03070 MED8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.41 x 10-4 96 18 13 48 84.21% 78.69% 114 61 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.064132'
Avg. expression score for this sample: '97.1513'
Avg. expression score in LCM sample: '82.2495'
Tissue used: 'full endosperm'
AT2G03070 MED8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-9 151 9 94.38% 160 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03070 MED8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.92471 x 10-1 54 24 69.23% 78 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03070 MED8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.047 x 10-2 13 11 54.17% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03060 AGL30 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.51883 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03060 AGL30 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.0057 x 10-2 24 7 6 28 77.42% 82.35% 31 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.028466'
Avg. expression score for this sample: '24.3233'
Avg. expression score in LCM sample: '2.93958'
Tissue used: 'full endosperm'
AT2G03060 AGL30 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.02126 x 10-1 12 3 1 11 80.00% 91.67% 15 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.028466'
Avg. expression score for this sample: '13.9205'
Avg. expression score in LCM sample: '2.93958'
Tissue used: 'pure endosperm, no chalazal'
AT2G03060 AGL30 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 6 4 1 1 60.00% 50.00% 10 2 TAIR8 Avg. embryo expression (dissected): '19.7952'
Avg. embryo expression (LCM): '20.8975'
AT2G03060 AGL30 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.1565 x 10-1 26 8 76.47% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03060 AGL30 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.53736 x 10-1 38 5 88.37% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03050 EMB93 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.1302 x 10-2 34 5 87.18% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03050 EMB93 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.57099 x 10-1 24 5 82.76% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03050 EMB93 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.764 x 10-2 3 6 33.33% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03050 EMB93 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 14 12 3 1 53.85% 25.00% 26 4 TAIR8 Avg. embryo expression (dissected): '74.2701'
Avg. embryo expression (LCM): '74.9873'
AT2G03050 EMB93 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.68203 x 10-1 40 12 21 42 76.92% 66.67% 52 63 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.542661'
Avg. expression score for this sample: '75.932'
Avg. expression score in LCM sample: '32.7617'
Tissue used: 'full endosperm'
AT2G03050 EMB93 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 15 6 7 14 71.43% 66.67% 21 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.542661'
Avg. expression score for this sample: '53.6907'
Avg. expression score in LCM sample: '32.7617'
Tissue used: 'pure endosperm, no chalazal'
AT2G03040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.71305'
Avg. expression score in LCM sample: '2.95428'
Tissue used: 'pure endosperm, no chalazal'
AT2G03040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G03040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 2 0 2 0.00% 100.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.07581'
Avg. expression score in LCM sample: '2.95428'
Tissue used: 'full endosperm'
AT2G03040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.33364 x 10-1 16 5 76.19% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.92075 x 10-1 3 4 42.86% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03030 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G03030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G03030 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G03030 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03030 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '26.1485'
Avg. embryo expression (LCM): '7.89934'
AT2G03020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.00558'
Avg. expression score in LCM sample: '3.96844'
Tissue used: 'full endosperm'
AT2G03020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.37107'
Avg. expression score in LCM sample: '3.96844'
Tissue used: 'pure endosperm, no chalazal'
AT2G03010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 3 3 2 70.00% 40.00% 10 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.051562'
Avg. expression score for this sample: '340.666'
Avg. expression score in LCM sample: '41.9332'
Tissue used: 'pure endosperm, no chalazal'
AT2G03010 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.49845 x 10-1 3 1 1 5 75.00% 83.33% 4 6 TAIR8 Avg. embryo expression (dissected): '325.788'
Avg. embryo expression (LCM): '237.181'
AT2G03010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.5611 x 10-2 6 21 5 17 22.22% 77.27% 27 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.051562'
Avg. expression score for this sample: '192.926'
Avg. expression score in LCM sample: '41.9332'
Tissue used: 'full endosperm'
AT2G03010 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.20345 x 10-1 14 25 35.90% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03010 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.4782 x 10-2 15 3 83.33% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03010 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.40163 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '.45063'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G03000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '.319321'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G03000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G03000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G03000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.3333 x 10-2 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02990 RNS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1901 12 99.37% 1913 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02990 RNS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.09598 x 10-1 264 21 92.63% 285 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02990 RNS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.7 x 10-4 236 41 85.20% 277 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02990 RNS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.4992 x 10-2 22 6 2 7 78.57% 77.78% 28 9 TAIR8 Avg. embryo expression (dissected): '22.8046'
Avg. embryo expression (LCM): '0'
AT2G02990 RNS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 3419 91 169 667 97.41% 79.78% 3510 836 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1514.63'
Avg. expression score in LCM sample: '203.316'
Tissue used: 'full endosperm'
AT2G02990 RNS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.7 x 10-10 492 58 81 106 89.45% 56.68% 550 187 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '344.856'
Avg. expression score in LCM sample: '203.316'
Tissue used: 'pure endosperm, no chalazal'
AT2G02980 OTP85 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.82043 x 10-1 5 1 0 4 83.33% 100.00% 6 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.778716'
Avg. expression score for this sample: '6.75018'
Avg. expression score in LCM sample: '2.17529'
Tissue used: 'pure endosperm, no chalazal'
AT2G02980 OTP85 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.82051 x 10-1 0 5 2 1 0.00% 33.33% 5 3 TAIR8 Avg. embryo expression (dissected): '12.8198'
Avg. embryo expression (LCM): '10.5366'
AT2G02980 OTP85 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 7 7 0 6 50.00% 100.00% 14 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.778716'
Avg. expression score for this sample: '14.8561'
Avg. expression score in LCM sample: '2.17529'
Tissue used: 'full endosperm'
AT2G02980 OTP85 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 2 71.43% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02980 OTP85 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.50317 x 10-1 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02980 OTP85 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '214.286'
Avg. expression score in LCM sample: '70.0209'
Tissue used: 'full endosperm'
AT2G02970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '64.903'
Avg. expression score in LCM sample: '70.0209'
Tissue used: 'pure endosperm, no chalazal'
AT2G02970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '58.0272'
Avg. embryo expression (LCM): '49.8576'
AT2G02970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02960 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1361 x 10-1 146 34 81.11% 180 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02960 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.3 x 10-7 302 37 89.09% 339 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02960 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.50396 x 10-1 30 11 73.17% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02960 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.83468 x 10-1 52 28 19 12 65.00% 38.71% 80 31 TAIR8 Avg. embryo expression (dissected): '47.4908'
Avg. embryo expression (LCM): '28.3321'
AT2G02960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.148 x 10-3 93 22 27 82 80.87% 75.23% 115 109 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009494'
Avg. expression score for this sample: '59.377'
Avg. expression score in LCM sample: '31.9827'
Tissue used: 'full endosperm'
AT2G02960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.77944 x 10-1 99 13 42 39 88.39% 48.15% 112 81 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009494'
Avg. expression score for this sample: '54.4935'
Avg. expression score in LCM sample: '31.9827'
Tissue used: 'pure endosperm, no chalazal'
AT2G02955 MEE12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.75188 x 10-1 24 4 11 14 85.71% 56.00% 28 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.830249'
Avg. expression score for this sample: '20.2926'
Avg. expression score in LCM sample: '13.2428'
Tissue used: 'pure endosperm, no chalazal'
AT2G02955 MEE12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 28 23 6 2 54.90% 25.00% 51 8 TAIR8 Avg. embryo expression (dissected): '25.9556'
Avg. embryo expression (LCM): '51.4525'
AT2G02955 MEE12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 53 17 31 44 75.71% 58.67% 70 75 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.830249'
Avg. expression score for this sample: '30.8492'
Avg. expression score in LCM sample: '13.2428'
Tissue used: 'full endosperm'
AT2G02955 MEE12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.33627 x 10-1 129 42 75.44% 171 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02955 MEE12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.82934 x 10-1 99 63 61.11% 162 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02955 MEE12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.19115 x 10-1 3 4 42.86% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02950 PKS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02950 PKS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.11372'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G02950 PKS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G02950 PKS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G02950 PKS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02950 PKS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02930 GSTF3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02930 GSTF3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02930 GSTF3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02930 GSTF3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.82835'
Avg. embryo expression (LCM): '0'
AT2G02930 GSTF3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 2 0 3 0.00% 100.00% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '101.519'
Avg. expression score in LCM sample: '26.662'
Tissue used: 'full endosperm'
AT2G02930 GSTF3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '86.5693'
Avg. expression score in LCM sample: '26.662'
Tissue used: 'pure endosperm, no chalazal'
AT2G02910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '43.6576'
Avg. expression score in LCM sample: '32.9527'
Tissue used: 'pure endosperm, no chalazal'
AT2G02910 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '74.322'
Avg. embryo expression (LCM): '38.3162'
AT2G02910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 2 0 100.00% 0.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '65.6612'
Avg. expression score in LCM sample: '32.9527'
Tissue used: 'full endosperm'
AT2G02910 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02910 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02910 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02900 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G02900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'