GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G162737	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	12	6	50.00%	33.33%	4	18	RefGen V2	χ2 p-value for B73 x Mo17: '.4794928' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: ''
GRMZM2G162737	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.174941 x 10^-1	89	103	83	86	46.35%	50.89%	192	169	RefGen V2	χ2 p-value for B73 x Mo17: '.3123214' χ2 p-value for Mo17 x B73: '.8174941' Biased in favor of strain: ''
GRMZM2G162725	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.22 x 10^-10	715	435	646	442	62.17%	40.62%	1150	1088	RefGen V2	χ2 p-value for B73 x Mo17: '1.50e-16' χ2 p-value for Mo17 x B73: '6.22e-10' Biased in favor of strain: 'B73'
GRMZM2G162725	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.13 x 10^-10	423	108	258	214	79.66%	45.34%	531	472	RefGen V2	χ2 p-value for B73 x Mo17: '2.13e-10' χ2 p-value for Mo17 x B73: '8.42e-23' Biased in favor of strain: 'B73'
GRMZM2G162702	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.841114 x 10^-1	2786	1498	1494	2864	65.03%	65.72%	4284	4358	RefGen V2	χ2 p-value for B73 x Mo17: '.0232665' χ2 p-value for Mo17 x B73: '.1841114' Biased in favor of strain: ''
GRMZM2G162702	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.57126 x 10^-2	872	697	872	774	55.58%	47.02%	1569	1646	RefGen V2	χ2 p-value for B73 x Mo17: '9.96e-06' χ2 p-value for Mo17 x B73: '.0157126' Biased in favor of strain: 'B73'
GRMZM2G162699	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.75317 x 10^-2	41	58	49	33	41.41%	40.24%	99	82	RefGen V2	χ2 p-value for B73 x Mo17: '.0875317' χ2 p-value for Mo17 x B73: '.0772442' Biased in favor of strain: ''
GRMZM2G162699	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	paternally biased	9.37 x 10^-8	19	38	42	12	33.33%	22.22%	57	54	RefGen V2	χ2 p-value for B73 x Mo17: '9.37e-08' χ2 p-value for Mo17 x B73: '4.26e-12' Biased in favor of strain: ''
GRMZM2G162697	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.2 x 10^-18	1240	337	594	740	78.63%	55.47%	1577	1334	RefGen V2	χ2 p-value for B73 x Mo17: '6.90e-24' χ2 p-value for Mo17 x B73: '4.20e-18' Biased in favor of strain: 'B73'
GRMZM2G162697	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1731	696	2022	841	71.32%	29.37%	2427	2863	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G162672	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.75896 x 10^-1	21	20	21	9	51.22%	30.00%	41	30	RefGen V2	χ2 p-value for B73 x Mo17: '.875896' χ2 p-value for Mo17 x B73: '.0284597' Biased in favor of strain: ''
GRMZM2G162672	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.311703 x 10^-1	3	8	4	7	27.27%	63.64%	11	11	RefGen V2	χ2 p-value for B73 x Mo17: '.0055776' χ2 p-value for Mo17 x B73: '.8311703' Biased in favor of strain: ''
GRMZM2G162670	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.230634 x 10^-1	10	1	3	7	90.91%	70.00%	11	10	RefGen V2	χ2 p-value for B73 x Mo17: '.0880834' χ2 p-value for Mo17 x B73: '.8230634' Biased in favor of strain: ''
GRMZM2G162670	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	5	1	50.00%	16.67%	4	6	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: ''
GRMZM2G162668	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.47 x 10^-9	165	73	184	77	69.33%	29.50%	238	261	RefGen V2	χ2 p-value for B73 x Mo17: '2.47e-09' χ2 p-value for Mo17 x B73: '3.52e-11' Biased in favor of strain: 'B73'
GRMZM2G162668	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.589 x 10^-4	164	48	115	124	77.36%	51.88%	212	239	RefGen V2	χ2 p-value for B73 x Mo17: '.0009589' χ2 p-value for Mo17 x B73: '1.25e-06' Biased in favor of strain: 'B73'
GRMZM2G162640	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.05182 x 10^-1	49	35	45	122	58.33%	73.05%	84	167	RefGen V2	χ2 p-value for B73 x Mo17: '.105182' χ2 p-value for Mo17 x B73: '.0799525' Biased in favor of strain: ''
GRMZM2G162640	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.324054 x 10^-1	266	253	279	277	51.25%	49.82%	519	556	RefGen V2	χ2 p-value for B73 x Mo17: '.5682459' χ2 p-value for Mo17 x B73: '.9324054' Biased in favor of strain: ''
GRMZM2G162637	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.51964 x 10^-2	84	49	51	34	63.16%	40.00%	133	85	RefGen V2	χ2 p-value for B73 x Mo17: '.0024063' χ2 p-value for Mo17 x B73: '.0651964' Biased in favor of strain: ''
GRMZM2G162637	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.09 x 10^-8	133	17	87	59	88.67%	40.41%	150	146	RefGen V2	χ2 p-value for B73 x Mo17: '1.09e-08' χ2 p-value for Mo17 x B73: '1.70e-11' Biased in favor of strain: 'B73'
GRMZM2G162605	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.27 x 10^-15	504	496	316	1050	50.40%	76.87%	1000	1366	RefGen V2	χ2 p-value for B73 x Mo17: '1.01e-27' χ2 p-value for Mo17 x B73: '1.27e-15' Biased in favor of strain: 'Mo17'
GRMZM2G162605	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.759642 x 10^-1	677	490	504	470	58.01%	48.25%	1167	974	RefGen V2	χ2 p-value for B73 x Mo17: '4.40e-08' χ2 p-value for Mo17 x B73: '.2759642' Biased in favor of strain: ''
GRMZM2G162544	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.839855 x 10^-1	209	281	193	220	42.65%	53.27%	490	413	RefGen V2	χ2 p-value for B73 x Mo17: '.0011434' χ2 p-value for Mo17 x B73: '.1839855' Biased in favor of strain: ''
GRMZM2G162544	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.088092 x 10^-1	175	55	96	156	76.09%	61.90%	230	252	RefGen V2	χ2 p-value for B73 x Mo17: '.0024409' χ2 p-value for Mo17 x B73: '.1088092' Biased in favor of strain: ''
GRMZM2G162535	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.50918 x 10^-2	274	281	164	395	49.37%	70.66%	555	559	RefGen V2	χ2 p-value for B73 x Mo17: '5.41e-18' χ2 p-value for Mo17 x B73: '.0450918' Biased in favor of strain: ''
GRMZM2G162535	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	42	47	42	42	47.19%	50.00%	89	84	RefGen V2	χ2 p-value for B73 x Mo17: '.5961127' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G162531	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.14 x 10^-16	365	154	349	164	70.33%	31.97%	519	513	RefGen V2	χ2 p-value for B73 x Mo17: '2.01e-20' χ2 p-value for Mo17 x B73: '3.14e-16' Biased in favor of strain: 'B73'
GRMZM2G162531	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.8135 x 10^-3	826	546	670	1532	60.20%	69.57%	1372	2202	RefGen V2	χ2 p-value for B73 x Mo17: '3.81e-07' χ2 p-value for Mo17 x B73: '.0038135' Biased in favor of strain: 'Mo17'
GRMZM2G162527	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.683815 x 10^-1	140	2	9	11	98.59%	55.00%	142	20	RefGen V2	χ2 p-value for B73 x Mo17: '7.02e-16' χ2 p-value for Mo17 x B73: '.2683815' Biased in favor of strain: ''
GRMZM2G162527	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.94 x 10^-25	227	34	207	44	86.97%	17.53%	261	251	RefGen V2	χ2 p-value for B73 x Mo17: '6.78e-33' χ2 p-value for Mo17 x B73: '7.94e-25' Biased in favor of strain: 'B73'
GRMZM2G162525	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	4	1	5	33.33%	83.33%	6	6	RefGen V2	χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: ''
GRMZM2G162525	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.054693 x 10^-1	10	4	30	6	71.43%	16.67%	14	36	RefGen V2	χ2 p-value for B73 x Mo17: '.7054693' χ2 p-value for Mo17 x B73: '1.97e-10' Biased in favor of strain: ''
GRMZM2G162508	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		9	0	1	0	100.00%	0.00%	9	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0338955' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G162508	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.6 x 10^-29	621	286	548	204	68.47%	27.13%	907	752	RefGen V2	χ2 p-value for B73 x Mo17: '9.64e-29' χ2 p-value for Mo17 x B73: '4.27e-36' Biased in favor of strain: 'B73'
GRMZM2G162486	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.454 x 10^-4	97	150	54	248	39.27%	82.12%	247	302	RefGen V2	χ2 p-value for B73 x Mo17: '.0007454' χ2 p-value for Mo17 x B73: '6.16e-29' Biased in favor of strain: 'Mo17'
GRMZM2G162486	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.0 x 10^-22	285	23	150	83	92.53%	35.62%	308	233	RefGen V2	χ2 p-value for B73 x Mo17: '6.00e-22' χ2 p-value for Mo17 x B73: '8.97e-24' Biased in favor of strain: 'B73'
GRMZM2G162481	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G162481	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.46 x 10^-17	510	273	520	260	65.13%	33.33%	783	780	RefGen V2	χ2 p-value for B73 x Mo17: '2.46e-17' χ2 p-value for Mo17 x B73: '1.28e-20' Biased in favor of strain: 'B73'
GRMZM2G162467	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.55 x 10^-10	2050	1427	1572	1233	58.96%	43.96%	3477	2805	RefGen V2	χ2 p-value for B73 x Mo17: '4.31e-26' χ2 p-value for Mo17 x B73: '1.55e-10' Biased in favor of strain: 'B73'
GRMZM2G162467	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.65014 x 10^-2	1963	1048	1102	1944	65.19%	63.82%	3011	3046	RefGen V2	χ2 p-value for B73 x Mo17: '.0865014' χ2 p-value for Mo17 x B73: '.0008649' Biased in favor of strain: ''
GRMZM2G162466	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G162466	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	2	0	100.00%	0.00%	4	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G162460	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.8 x 10^-6	99	45	81	32	68.75%	28.32%	144	113	RefGen V2	χ2 p-value for B73 x Mo17: '6.80e-06' χ2 p-value for Mo17 x B73: '4.04e-06' Biased in favor of strain: 'B73'
GRMZM2G162460	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.406422 x 10^-1	50	23	56	30	68.49%	34.88%	73	86	RefGen V2	χ2 p-value for B73 x Mo17: '.7406422' χ2 p-value for Mo17 x B73: '4.04e-10' Biased in favor of strain: ''
GRMZM2G162451	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	3	0.00%	100.00%	1	3	RefGen V2	χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: ''
GRMZM2G162451	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.655179 x 10^-1	5	17	4	9	22.73%	69.23%	22	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0105152' χ2 p-value for Mo17 x B73: '.1655179' Biased in favor of strain: ''
GRMZM2G162447	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	1	0	50.00%	0.00%	2	1	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G162447	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		11	1	0	2	91.67%	100.00%	12	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0661941' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G162445	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.99 x 10^-7	270	69	192	133	79.65%	40.92%	339	325	RefGen V2	χ2 p-value for B73 x Mo17: '3.99e-07' χ2 p-value for Mo17 x B73: '7.20e-23' Biased in favor of strain: 'B73'
GRMZM2G162445	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.99 x 10^-27	634	275	428	164	69.75%	27.70%	909	592	RefGen V2	χ2 p-value for B73 x Mo17: '1.08e-32' χ2 p-value for Mo17 x B73: '1.99e-27' Biased in favor of strain: 'B73'
GRMZM2G162443	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.2484 x 10^-3	344	140	222	159	71.07%	41.73%	484	381	RefGen V2	χ2 p-value for B73 x Mo17: '1.81e-20' χ2 p-value for Mo17 x B73: '.0012484' Biased in favor of strain: 'B73'
GRMZM2G162443	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.044 x 10^-4	265	87	217	258	75.28%	54.32%	352	475	RefGen V2	χ2 p-value for B73 x Mo17: '.0006044' χ2 p-value for Mo17 x B73: '1.13e-08' Biased in favor of strain: 'B73'
GRMZM2G162426	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.517606 x 10^-1	319	148	233	374	68.31%	61.61%	467	607	RefGen V2	χ2 p-value for B73 x Mo17: '.4517606' χ2 p-value for Mo17 x B73: '.0082795' Biased in favor of strain: ''
GRMZM2G162426	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.50545 x 10^-2	219	263	230	314	45.44%	57.72%	482	544	RefGen V2	χ2 p-value for B73 x Mo17: '.0450545' χ2 p-value for Mo17 x B73: '.0003164' Biased in favor of strain: 'Mo17'
GRMZM2G162413	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.285 x 10^-4	153	87	160	105	63.75%	39.62%	240	265	RefGen V2	χ2 p-value for B73 x Mo17: '.0000204' χ2 p-value for Mo17 x B73: '.0007285' Biased in favor of strain: 'B73'
GRMZM2G162413	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.873676 x 10^-1	72	38	36	92	65.45%	71.88%	110	128	RefGen V2	χ2 p-value for B73 x Mo17: '.7873676' χ2 p-value for Mo17 x B73: '.2112997' Biased in favor of strain: ''
GRMZM2G162405	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.164124 x 10^-1	21	7	5	14	75.00%	73.68%	28	19	RefGen V2	χ2 p-value for B73 x Mo17: '.3495861' χ2 p-value for Mo17 x B73: '.5164124' Biased in favor of strain: ''
GRMZM2G162405	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.91496 x 10^-2	35	11	28	13	76.09%	31.71%	46	41	RefGen V2	χ2 p-value for B73 x Mo17: '.0004022' χ2 p-value for Mo17 x B73: '.0191496' Biased in favor of strain: 'B73'
GRMZM2G162396	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.443998 x 10^-1	15	8	4	11	65.22%	73.33%	23	15	RefGen V2	χ2 p-value for B73 x Mo17: '.1443998' χ2 p-value for Mo17 x B73: '.0707011' Biased in favor of strain: ''
GRMZM2G162396	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.183164 x 10^-1	80	28	52	93	74.07%	64.14%	108	145	RefGen V2	χ2 p-value for B73 x Mo17: '.1024797' χ2 p-value for Mo17 x B73: '.5183164' Biased in favor of strain: ''
GRMZM2G162382	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2762	885	1852	1516	75.73%	45.01%	3647	3368	RefGen V2	χ2 p-value for B73 x Mo17: '3.46e-31' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G162382	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.17 x 10^-12	972	509	941	660	65.63%	41.22%	1481	1601	RefGen V2	χ2 p-value for B73 x Mo17: '2.44e-33' χ2 p-value for Mo17 x B73: '2.17e-12' Biased in favor of strain: 'B73'
GRMZM2G162374	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.971465 x 10^-1	14	9	23	6	60.87%	20.69%	23	29	RefGen V2	χ2 p-value for B73 x Mo17: '.2971465' χ2 p-value for Mo17 x B73: '.001595' Biased in favor of strain: ''
GRMZM2G162374	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.385918 x 10^-1	22	8	12	10	73.33%	45.45%	30	22	RefGen V2	χ2 p-value for B73 x Mo17: '.4385918' χ2 p-value for Mo17 x B73: '.0348085' Biased in favor of strain: ''
GRMZM2G162369	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	2	0	0	60.00%		5	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G162369	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G162359	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.252529 x 10^-1	6	11	2	29	35.29%	93.55%	17	31	RefGen V2	χ2 p-value for B73 x Mo17: '.2252529' χ2 p-value for Mo17 x B73: '1.24e-06' Biased in favor of strain: ''
GRMZM2G162359	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.58 x 10^-26	38	111	66	489	25.50%	88.11%	149	555	RefGen V2	χ2 p-value for B73 x Mo17: '1.58e-26' χ2 p-value for Mo17 x B73: '8.62e-27' Biased in favor of strain: 'Mo17'
GRMZM2G162329	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.020247 x 10^-1	50	21	38	47	70.42%	55.29%	71	85	RefGen V2	χ2 p-value for B73 x Mo17: '.5020247' χ2 p-value for Mo17 x B73: '.0261351' Biased in favor of strain: ''
GRMZM2G162329	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.236 x 10^-4	144	93	127	78	60.76%	38.05%	237	205	RefGen V2	χ2 p-value for B73 x Mo17: '.0009236' χ2 p-value for Mo17 x B73: '.0006209' Biased in favor of strain: 'B73'
GRMZM2G162305	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	1	100.00%	100.00%	3	1	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G162305	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	0	0	100.00%		5	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G162295	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.32676 x 10^-2	20	4	22	0	83.33%	0.00%	24	22	RefGen V2	χ2 p-value for B73 x Mo17: '.0832676' χ2 p-value for Mo17 x B73: '3.28e-11' Biased in favor of strain: ''
GRMZM2G162295	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.25549 x 10^-2	35	17	45	24	67.31%	34.78%	52	69	RefGen V2	χ2 p-value for B73 x Mo17: '.0125549' χ2 p-value for Mo17 x B73: '.0114681' Biased in favor of strain: 'B73'
GRMZM2G162292	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.99 x 10^-6	350	235	310	189	59.83%	37.88%	585	499	RefGen V2	χ2 p-value for B73 x Mo17: '1.99e-06' χ2 p-value for Mo17 x B73: '6.07e-08' Biased in favor of strain: 'B73'
GRMZM2G162292	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.361 x 10^-4	313	107	181	242	74.52%	57.21%	420	423	RefGen V2	χ2 p-value for B73 x Mo17: '.0006361' χ2 p-value for Mo17 x B73: '.000037' Biased in favor of strain: 'B73'
GRMZM2G162290	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.4 x 10^-29	657	109	430	266	85.77%	38.22%	766	696	RefGen V2	χ2 p-value for B73 x Mo17: '3.41e-29' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G162290	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.33 x 10^-11	420	193	323	174	68.52%	35.01%	613	497	RefGen V2	χ2 p-value for B73 x Mo17: '4.80e-20' χ2 p-value for Mo17 x B73: '2.33e-11' Biased in favor of strain: 'B73'
GRMZM2G162286	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.43 x 10^-21	268	88	261	78	75.28%	23.01%	356	339	RefGen V2	χ2 p-value for B73 x Mo17: '1.43e-21' χ2 p-value for Mo17 x B73: '2.81e-23' Biased in favor of strain: 'B73'
GRMZM2G162286	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.0242 x 10^-3	54	12	69	31	81.82%	31.00%	66	100	RefGen V2	χ2 p-value for B73 x Mo17: '.0090242' χ2 p-value for Mo17 x B73: '3.85e-14' Biased in favor of strain: 'B73'
GRMZM2G162284	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	797	6	166	28	99.25%	14.43%	803	194	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G162284	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.496918 x 10^-1	65	6	16	12	91.55%	42.86%	71	28	RefGen V2	χ2 p-value for B73 x Mo17: '2.52e-12' χ2 p-value for Mo17 x B73: '.4496918' Biased in favor of strain: ''
GRMZM2G162266	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	447	0	368	0	100.00%	0.00%	447	368	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G162266	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	408	1	226	0	99.76%	0.00%	409	226	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G162251	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.162739 x 10^-1	915	484	532	898	65.40%	62.80%	1399	1430	RefGen V2	χ2 p-value for B73 x Mo17: '.3162739' χ2 p-value for Mo17 x B73: '.0019091' Biased in favor of strain: ''
GRMZM2G162251	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.065433 x 10^-1	827	694	588	611	54.37%	50.96%	1521	1199	RefGen V2	χ2 p-value for B73 x Mo17: '.000649' χ2 p-value for Mo17 x B73: '.5065433' Biased in favor of strain: ''
GRMZM2G162250	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.018 x 10^-4	330	455	279	365	42.04%	56.68%	785	644	RefGen V2	χ2 p-value for B73 x Mo17: '8.14e-06' χ2 p-value for Mo17 x B73: '.0007018' Biased in favor of strain: 'Mo17'
GRMZM2G162250	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.29 x 10^-8	52	144	71	289	26.53%	80.28%	196	360	RefGen V2	χ2 p-value for B73 x Mo17: '9.32e-33' χ2 p-value for Mo17 x B73: '4.29e-08' Biased in favor of strain: 'Mo17'
GRMZM2G162238	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G162238	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.74 x 10^-5	0	20	0	17	0.00%	100.00%	20	17	RefGen V2	χ2 p-value for B73 x Mo17: '7.74e-06' χ2 p-value for Mo17 x B73: '.0000374' Biased in favor of strain: 'Mo17'
GRMZM2G162230	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	0	4	0	100.00%	0.00%	7	4	RefGen V2	χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: ''
GRMZM2G162230	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G162184	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G162184	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	1	2	5	75.00%	71.43%	4	7	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: ''
GRMZM2G162175	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1116	503	904	433	68.93%	32.39%	1619	1337	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '5.75e-38' Biased in favor of strain: 'B73'
GRMZM2G162175	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.19 x 10^-5	293	91	241	256	76.30%	51.51%	384	497	RefGen V2	χ2 p-value for B73 x Mo17: '.0000619' χ2 p-value for Mo17 x B73: '7.59e-13' Biased in favor of strain: 'B73'
GRMZM2G162167	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.422435 x 10^-1	254	128	134	332	66.49%	71.24%	382	466	RefGen V2	χ2 p-value for B73 x Mo17: '.9422435' χ2 p-value for Mo17 x B73: '.0360477' Biased in favor of strain: ''
GRMZM2G162167	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.414647 x 10^-1	209	180	237	168	53.73%	41.48%	389	405	RefGen V2	χ2 p-value for B73 x Mo17: '.1414647' χ2 p-value for Mo17 x B73: '.0006066' Biased in favor of strain: ''
GRMZM2G162158	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	1	1	1	80.00%	50.00%	5	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G162158	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''

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