Displaying data sets 122501 - 122600 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT2G05335 SCRL15 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05335 SCRL15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.549765'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G05330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '21.7509'
Avg. expression score in LCM sample: '40.9484'
Tissue used: 'full endosperm'
AT2G05330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.9278'
Avg. expression score in LCM sample: '40.9484'
Tissue used: 'pure endosperm, no chalazal'
AT2G05330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '50.3814'
Avg. embryo expression (LCM): '83.5899'
AT2G05330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.9 x 10-24 330 14 95.93% 344 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.9077 x 10-1 121 35 77.56% 156 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1687 41 97.63% 1728 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.51377 x 10-1 275 68 132 132 80.17% 50.00% 343 264 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.1e-07'
Avg. expression score for this sample: '156.72'
Avg. expression score in LCM sample: '85.2626'
Tissue used: 'pure endosperm, no chalazal'
AT2G05320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.8 x 10-10 598 72 216 401 89.25% 64.99% 670 617 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.1e-07'
Avg. expression score for this sample: '249.613'
Avg. expression score in LCM sample: '85.2626'
Tissue used: 'full endosperm'
AT2G05320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.7281 x 10-2 173 69 79 27 71.49% 25.47% 242 106 TAIR8 Avg. embryo expression (dissected): '151.312'
Avg. embryo expression (LCM): '90.1957'
AT2G05310 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.35095 x 10-1 17 5 1 1 77.27% 50.00% 22 2 TAIR8 Avg. embryo expression (dissected): '148.434'
Avg. embryo expression (LCM): '78.353'
AT2G05310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.47032 x 10-1 14 0 3 2 100.00% 40.00% 14 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.085741'
Avg. expression score for this sample: '106.246'
Avg. expression score in LCM sample: '20.9592'
Tissue used: 'pure endosperm, no chalazal'
AT2G05310 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.816 x 10-3 1 4 20.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05310 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.02126 x 10-1 15 3 1 8 83.33% 88.89% 18 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.085741'
Avg. expression score for this sample: '133.074'
Avg. expression score in LCM sample: '20.9592'
Tissue used: 'full endosperm'
AT2G05310 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05310 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05294 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05294 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05294 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G05294 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G05294 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT2G05294 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.12643'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G05270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9.65157'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G05270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.70697'
Avg. embryo expression (LCM): '12.1316'
AT2G05270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.90062 x 10-1 11 1 91.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '79.6199'
Avg. embryo expression (LCM): '51.1134'
AT2G05260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '107.091'
Avg. expression score in LCM sample: '42.7268'
Tissue used: 'pure endosperm, no chalazal'
AT2G05260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 10 3 76.92% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 3 9 75.00% 0 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '85.2023'
Avg. expression score in LCM sample: '42.7268'
Tissue used: 'full endosperm'
AT2G05250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '69.0969'
Avg. expression score in LCM sample: '35.7453'
Tissue used: 'full endosperm'
AT2G05250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '53.5283'
Avg. expression score in LCM sample: '35.7453'
Tissue used: 'pure endosperm, no chalazal'
AT2G05250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '77.9113'
Avg. embryo expression (LCM): '63.3078'
AT2G05250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '58.7561'
Avg. expression score in LCM sample: '42.9326'
Tissue used: 'pure endosperm, no chalazal'
AT2G05230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '85.8875'
Avg. expression score in LCM sample: '42.9326'
Tissue used: 'full endosperm'
AT2G05230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '98.3461'
Avg. embryo expression (LCM): '70.2527'
AT2G05220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.6701 x 10-2 21 1 3 1 95.45% 25.00% 22 4 TAIR8 Avg. embryo expression (dissected): '320.89'
Avg. embryo expression (LCM): '360.318'
AT2G05220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.31989 x 10-1 17 0 2 0 100.00% 0.00% 17 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.713426'
Avg. expression score for this sample: '129.413'
Avg. expression score in LCM sample: '65.5086'
Tissue used: 'pure endosperm, no chalazal'
AT2G05220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.9 x 10-6 57 0 100.00% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 31 0 18 1 100.00% 5.26% 31 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.713426'
Avg. expression score for this sample: '116.285'
Avg. expression score in LCM sample: '65.5086'
Tissue used: 'full endosperm'
AT2G05220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.79073 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.3 x 10-5 5 18 21.74% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05210 AtPOT1a endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.8504 x 10-2 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05210 AtPOT1a endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.196 x 10-2 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05210 AtPOT1a endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 29 11 12 16 72.50% 57.14% 40 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.413918'
Avg. expression score for this sample: '104.004'
Avg. expression score in LCM sample: '58.6153'
Tissue used: 'full endosperm'
AT2G05210 AtPOT1a endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.91986 x 10-1 22 17 21 32 56.41% 60.38% 39 53 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.413918'
Avg. expression score for this sample: '135.027'
Avg. expression score in LCM sample: '58.6153'
Tissue used: 'pure endosperm, no chalazal'
AT2G05210 AtPOT1a embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.5536 x 10-1 16 22 8 6 42.11% 42.86% 38 14 TAIR8 Avg. embryo expression (dissected): '125.59'
Avg. embryo expression (LCM): '122.986'
AT2G05210 AtPOT1a endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.0692 x 10-2 14 1 93.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05185 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05185 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.95855'
Avg. expression score in LCM sample: '4.52696'
Tissue used: 'pure endosperm, no chalazal'
AT2G05185 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '36.102'
Avg. expression score in LCM sample: '4.52696'
Tissue used: 'full endosperm'
AT2G05185 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '15.8291'
Avg. embryo expression (LCM): '5.80206'
AT2G05185 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05185 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05180 CYP705A6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.74725 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05180 CYP705A6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05180 CYP705A6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 3 0 0 0 100.00% 3 0 TAIR8 Avg. embryo expression (dissected): '.875121'
Avg. embryo expression (LCM): '.941893'
AT2G05180 CYP705A6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.31677'
Avg. expression score for this sample: '1.16862'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G05180 CYP705A6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05180 CYP705A6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.1677 x 10-1 10 1 0 1 90.91% 100.00% 11 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.31677'
Avg. expression score for this sample: '3.77603'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G05170 VPS11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.75307 x 10-1 194 26 113 117 88.18% 50.87% 220 230 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.497243'
Avg. expression score for this sample: '174.65'
Avg. expression score in LCM sample: '121.89'
Tissue used: 'full endosperm'
AT2G05170 VPS11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 76 12 37 25 86.36% 40.32% 88 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.497243'
Avg. expression score for this sample: '150.215'
Avg. expression score in LCM sample: '121.89'
Tissue used: 'pure endosperm, no chalazal'
AT2G05170 VPS11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.598 x 10-3 58 15 12 3 79.45% 20.00% 73 15 TAIR8 Avg. embryo expression (dissected): '133.665'
Avg. embryo expression (LCM): '105.655'
AT2G05170 VPS11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.4 x 10-20 277 18 93.90% 295 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05170 VPS11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.3905 x 10-2 10 12 45.45% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05170 VPS11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.663 x 10-3 148 105 58.50% 253 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05160 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.375 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05160 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05160 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.747713'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G05160 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 5 83.33% 0 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.70554'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G05160 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.85139 x 10-1 14 32 6 14 30.43% 70.00% 46 20 TAIR8 Avg. embryo expression (dissected): '33.2729'
Avg. embryo expression (LCM): '18.1597'
AT2G05140 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.19968'
Avg. embryo expression (LCM): '2.59963'
AT2G05140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT2G05140 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT2G05140 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05140 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.9 x 10-6 360 88 80.36% 448 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.70771 x 10-1 44 18 70.97% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.98203 x 10-1 109 48 85 213 69.43% 71.48% 157 298 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.726346'
Avg. expression score for this sample: '49.208'
Avg. expression score in LCM sample: '26.6767'
Tissue used: 'full endosperm'
AT2G05120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.11903 x 10-1 56 57 25 74 49.56% 74.75% 113 99 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.726346'
Avg. expression score for this sample: '27.1345'
Avg. expression score in LCM sample: '26.6767'
Tissue used: 'pure endosperm, no chalazal'
AT2G05120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.26232 x 10-1 90 109 26 36 45.23% 58.06% 199 62 TAIR8 Avg. embryo expression (dissected): '56.9714'
Avg. embryo expression (LCM): '97.6806'
AT2G05120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.517 x 10-3 423 141 75.00% 564 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05117 SCRL9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT2G05117 SCRL9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 4 0 6 0.00% 100.00% 4 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '13.3672'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'