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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G49890 CLC-C embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.00105 x 10-1 15 8 1 2 65.22% 66.67% 23 3 TAIR8 Avg. embryo expression (dissected): '6.4176'
Avg. embryo expression (LCM): '7.10815'
AT5G49890 CLC-C endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.4808 x 10-2 49 3 94.23% 52 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G49890 CLC-C endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.1713 x 10-1 240 38 86.33% 278 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G49890 CLC-C endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.9 x 10-6 357 16 95.71% 373 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G49880 MAD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 2 1 4 66.67% 80.00% 6 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.232547'
Avg. expression score for this sample: '98.0951'
Avg. expression score in LCM sample: '70.2854'
Tissue used: 'pure endosperm, no chalazal'
AT5G49880 MAD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.89847 x 10-1 3 0 2 10 100.00% 83.33% 3 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.232547'
Avg. expression score for this sample: '144.121'
Avg. expression score in LCM sample: '70.2854'
Tissue used: 'full endosperm'
AT5G49880 MAD1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 4 2 0 63.64% 0.00% 11 2 TAIR8 Avg. embryo expression (dissected): '104.367'
Avg. embryo expression (LCM): '99.9286'
AT5G49880 MAD1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49880 MAD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.04107 x 10-1 21 3 87.50% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49880 MAD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.57626 x 10-1 7 3 70.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G49870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.448384'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G49870 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G49870 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49870 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49870 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.386165'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G49860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G49860 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G49860 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49860 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49860 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.30769 x 10-1 6 0 0 1 100.00% 100.00% 6 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.34975'
Avg. expression score in LCM sample: '35.275'
Tissue used: 'pure endosperm, no chalazal'
AT5G49850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.86131 x 10-1 2 5 0 0 28.57% 7 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.52609'
Avg. expression score in LCM sample: '35.275'
Tissue used: 'full endosperm'
AT5G49850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '3.1489'
Avg. embryo expression (LCM): '1.88379'
AT5G49850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.78456 x 10-1 5 5 50.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.64734 x 10-1 12 1 92.31% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.8026 x 10-1 39 47 11 59 45.35% 84.29% 86 70 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.171123'
Avg. expression score for this sample: '64.2515'
Avg. expression score in LCM sample: '12.214'
Tissue used: 'pure endosperm, no chalazal'
AT5G49840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.6724 x 10-2 40 30 28 150 57.14% 84.27% 70 178 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.171123'
Avg. expression score for this sample: '64.6138'
Avg. expression score in LCM sample: '12.214'
Tissue used: 'full endosperm'
AT5G49840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.23666 x 10-1 30 61 17 27 32.97% 61.36% 91 44 TAIR8 Avg. embryo expression (dissected): '92.1009'
Avg. embryo expression (LCM): '36.1561'
AT5G49840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.9823 x 10-2 32 4 88.89% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.5 x 10-6 208 30 87.39% 238 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.869 x 10-3 159 35 81.96% 194 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49830 EXO84B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.366 23 6 5 15 79.31% 75.00% 29 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.221665'
Avg. expression score for this sample: '104.547'
Avg. expression score in LCM sample: '94.1255'
Tissue used: 'pure endosperm, no chalazal'
AT5G49830 EXO84B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.92499 x 10-1 83 16 36 43 83.84% 54.43% 99 79 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.221665'
Avg. expression score for this sample: '95.6628'
Avg. expression score in LCM sample: '94.1255'
Tissue used: 'full endosperm'
AT5G49830 EXO84B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.77087 x 10-1 15 6 8 6 71.43% 42.86% 21 14 TAIR8 Avg. embryo expression (dissected): '87.961'
Avg. embryo expression (LCM): '77.3357'
AT5G49830 EXO84B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.68884 x 10-1 10 7 58.82% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49830 EXO84B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.43639 x 10-1 92 45 67.15% 137 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49830 EXO84B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.64 x 10-4 165 24 87.30% 189 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49820 RUS6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.46953 x 10-1 205 89 95 152 69.73% 61.54% 294 247 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.915881'
Avg. expression score for this sample: '689.623'
Avg. expression score in LCM sample: '281.7'
Tissue used: 'pure endosperm, no chalazal'
AT5G49820 RUS6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 407 121 303 440 77.08% 59.22% 528 743 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.915881'
Avg. expression score for this sample: '501.58'
Avg. expression score in LCM sample: '281.7'
Tissue used: 'full endosperm'
AT5G49820 RUS6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.07397 x 10-1 262 181 73 48 59.14% 39.67% 443 121 TAIR8 Avg. embryo expression (dissected): '903.706'
Avg. embryo expression (LCM): '588.834'
AT5G49820 RUS6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.88049 x 10-1 41 23 64.06% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49820 RUS6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.38 x 10-3 135 41 76.70% 176 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49820 RUS6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.5 x 10-29 307 20 93.88% 327 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49810 MMT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.9624 x 10-2 37 10 9 37 78.72% 80.43% 47 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.6e-08'
Avg. expression score for this sample: '19.3563'
Avg. expression score in LCM sample: '8.53949'
Tissue used: 'pure endosperm, no chalazal'
AT5G49810 MMT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5 x 10-7 107 12 25 123 89.92% 83.11% 119 148 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.6e-08'
Avg. expression score for this sample: '36.3537'
Avg. expression score in LCM sample: '8.53949'
Tissue used: 'full endosperm'
AT5G49810 MMT embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.96042 x 10-1 42 49 14 13 46.15% 48.15% 91 27 TAIR8 Avg. embryo expression (dissected): '47.2903'
Avg. embryo expression (LCM): '42.7494'
AT5G49810 MMT endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.1472 51 4 92.73% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49810 MMT endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.6594 x 10-1 364 76 82.73% 440 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49810 MMT endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3606 x 10-2 336 35 90.57% 371 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.14489'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G49800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.57234'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G49800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 3 3 1 62.50% 25.00% 8 4 TAIR8 Avg. embryo expression (dissected): '21.8299'
Avg. embryo expression (LCM): '20.8598'
AT5G49800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.251001'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G49780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.338906'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G49780 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.09423'
Avg. embryo expression (LCM): '0'
AT5G49780 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49780 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49780 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G49770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.10429'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G49770 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G49770 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49770 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49770 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.3382 x 10-2 2 0 0 14 100.00% 100.00% 2 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.9e-07'
Avg. expression score for this sample: '5.89042'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G49760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.2 x 10-5 20 3 0 41 86.96% 100.00% 23 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.9e-07'
Avg. expression score for this sample: '16.4577'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G49760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 0 0 75.00% 4 0 TAIR8 Avg. embryo expression (dissected): '2.244'
Avg. embryo expression (LCM): '0'
AT5G49760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.419 x 10-2 325 2 99.39% 327 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 64 2 96.97% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G49750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G49750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G49750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49740 FRO7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '447.215'
Avg. expression score in LCM sample: '223.585'
Tissue used: 'pure endosperm, no chalazal'
AT5G49740 FRO7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '333.189'
Avg. expression score in LCM sample: '223.585'
Tissue used: 'full endosperm'
AT5G49740 FRO7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '54.7024'
Avg. embryo expression (LCM): '23.1957'
AT5G49740 FRO7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49740 FRO7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49740 FRO7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49730 FRO6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '501.996'
Avg. expression score in LCM sample: '234.461'
Tissue used: 'pure endosperm, no chalazal'
AT5G49730 FRO6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '421.154'
Avg. expression score in LCM sample: '234.461'
Tissue used: 'full endosperm'
AT5G49730 FRO6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '39.0263'
Avg. embryo expression (LCM): '12.9605'
AT5G49730 FRO6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49730 FRO6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49730 FRO6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49720 GH9A1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1074.49'
Avg. expression score in LCM sample: '411.468'
Tissue used: 'pure endosperm, no chalazal'
AT5G49720 GH9A1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2079.15'
Avg. expression score in LCM sample: '411.468'
Tissue used: 'full endosperm'
AT5G49720 GH9A1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '539'
Avg. embryo expression (LCM): '204.328'
AT5G49720 GH9A1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49720 GH9A1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G49720 GH9A1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'