| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM5G854710 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.84 x 10-18 | 105 | 0 | 76 | 0 | 100.00% | 0.00% | 105 | 76 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.22e-24' χ2 p-value for Mo17 x B73: '2.84e-18' Biased in favor of strain: 'B73' |
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| GRMZM5G854710 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.96 x 10-6 | 41 | 0 | 14 | 0 | 100.00% | 0.00% | 41 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.96e-06' χ2 p-value for Mo17 x B73: '1.21e-07' Biased in favor of strain: 'B73' |
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| GRMZM5G854655 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.09 x 10-8 | 440 | 124 | 177 | 163 | 78.01% | 47.94% | 564 | 340 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.09e-08' χ2 p-value for Mo17 x B73: '2.40e-13' Biased in favor of strain: 'B73' |
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| GRMZM5G854655 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.939547 x 10-1 | 123 | 85 | 147 | 138 | 59.13% | 48.42% | 208 | 285 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008418' χ2 p-value for Mo17 x B73: '.5939547' Biased in favor of strain: '' |
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| GRMZM5G854613 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.316146 x 10-1 | 18 | 5 | 13 | 10 | 78.26% | 43.48% | 23 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0067144' χ2 p-value for Mo17 x B73: '.5316146' Biased in favor of strain: '' |
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| GRMZM5G854613 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.88868 x 10-2 | 27 | 6 | 21 | 26 | 81.82% | 55.32% | 33 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0648412' χ2 p-value for Mo17 x B73: '.0988868' Biased in favor of strain: '' |
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| GRMZM5G854604 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G854604 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 6 | 0 | 100.00% | 0.00% | 7 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM5G854533 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.84028 x 10-1 | 34 | 20 | 24 | 23 | 62.96% | 48.94% | 54 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0567594' χ2 p-value for Mo17 x B73: '.884028' Biased in favor of strain: '' |
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| GRMZM5G854533 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.152664 x 10-1 | 91 | 25 | 30 | 67 | 78.45% | 69.07% | 116 | 97 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.007108' χ2 p-value for Mo17 x B73: '.6152664' Biased in favor of strain: '' |
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| GRMZM5G854499 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 0.0 | 4 | 209 | 153 | 34 | 1.88% | 18.18% | 213 | 187 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM5G854499 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.23 x 10-18 | 518 | 270 | 406 | 193 | 65.74% | 32.22% | 788 | 599 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.00e-18' χ2 p-value for Mo17 x B73: '3.23e-18' Biased in favor of strain: 'B73' |
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| GRMZM5G854473 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.854947 x 10-1 | 26 | 28 | 41 | 23 | 48.15% | 35.94% | 54 | 64 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7854947' χ2 p-value for Mo17 x B73: '.0244489' Biased in favor of strain: '' |
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| GRMZM5G854473 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.0888 x 10-3 | 74 | 18 | 73 | 48 | 80.43% | 39.67% | 92 | 121 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0050888' χ2 p-value for Mo17 x B73: '2.98e-10' Biased in favor of strain: 'B73' |
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| GRMZM5G854301 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.22058 x 10-2 | 22 | 4 | 12 | 10 | 84.62% | 45.45% | 26 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0522058' χ2 p-value for Mo17 x B73: '.0348085' Biased in favor of strain: '' |
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| GRMZM5G854301 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.70067 x 10-1 | 21 | 13 | 30 | 7 | 61.76% | 18.92% | 34 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.170067' χ2 p-value for Mo17 x B73: '.0001561' Biased in favor of strain: '' |
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| GRMZM5G854292 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 0 | 0 | 100.00% | 5 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G854292 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 20 | 0 | 0 | 0 | 100.00% | 20 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G854284 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.2 x 10-18 | 153 | 0 | 97 | 0 | 100.00% | 0.00% | 153 | 97 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.20e-18' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G854284 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 394 | 0 | 364 | 0 | 100.00% | 0.00% | 394 | 364 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G854185 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.342661 x 10-1 | 61 | 76 | 74 | 73 | 44.53% | 49.66% | 137 | 147 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2000053' χ2 p-value for Mo17 x B73: '.9342661' Biased in favor of strain: '' |
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| GRMZM5G854185 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.32746 x 10-1 | 32 | 20 | 15 | 54 | 61.54% | 78.26% | 52 | 69 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.432746' χ2 p-value for Mo17 x B73: '.0410509' Biased in favor of strain: '' |
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| GRMZM5G854045 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | maternally biased | 7.41 x 10-11 | 1128 | 62 | 102 | 413 | 94.79% | 80.19% | 1190 | 515 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '7.41e-11' Biased in favor of strain: '' |
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| GRMZM5G854045 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.366684 x 10-1 | 230 | 55 | 72 | 84 | 80.70% | 53.85% | 285 | 156 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.54e-25' χ2 p-value for Mo17 x B73: '.3366684' Biased in favor of strain: '' |
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| GRMZM5G853950 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 1 | 0.00% | 100.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G853950 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G853854 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.434433 x 10-1 | 15 | 6 | 3 | 25 | 71.43% | 89.29% | 21 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6434433' χ2 p-value for Mo17 x B73: '.0111176' Biased in favor of strain: '' |
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| GRMZM5G853854 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.79 x 10-18 | 313 | 122 | 362 | 163 | 71.95% | 31.05% | 435 | 525 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.30e-20' χ2 p-value for Mo17 x B73: '3.79e-18' Biased in favor of strain: 'B73' |
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| GRMZM5G853836 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.52 x 10-6 | 88 | 34 | 67 | 23 | 72.13% | 25.56% | 122 | 90 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.01e-06' χ2 p-value for Mo17 x B73: '3.52e-06' Biased in favor of strain: 'B73' |
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| GRMZM5G853836 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 6 | 3 | 2 | 14.29% | 40.00% | 7 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0032832' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: '' |
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| GRMZM5G853392 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.913014 x 10-1 | 17 | 5 | 10 | 9 | 77.27% | 47.37% | 22 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2913014' χ2 p-value for Mo17 x B73: '.0743529' Biased in favor of strain: '' |
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| GRMZM5G853392 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.7 x 10-11 | 235 | 110 | 245 | 91 | 68.12% | 27.08% | 345 | 336 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.70e-11' χ2 p-value for Mo17 x B73: '4.41e-17' Biased in favor of strain: 'B73' |
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| GRMZM5G853361 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.4697 x 10-3 | 169 | 103 | 133 | 88 | 62.13% | 39.82% | 272 | 221 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000629' χ2 p-value for Mo17 x B73: '.0024697' Biased in favor of strain: 'B73' |
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| GRMZM5G853361 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.67167 x 10-2 | 52 | 14 | 57 | 28 | 78.79% | 32.94% | 66 | 85 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0367167' χ2 p-value for Mo17 x B73: '4.23e-11' Biased in favor of strain: '' |
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| GRMZM5G853191 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.24586 x 10-2 | 39 | 104 | 55 | 157 | 27.27% | 74.06% | 143 | 212 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.63e-23' χ2 p-value for Mo17 x B73: '.0224586' Biased in favor of strain: '' |
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| GRMZM5G853191 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.8 x 10-6 | 262 | 137 | 193 | 113 | 65.66% | 36.93% | 399 | 306 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.90e-10' χ2 p-value for Mo17 x B73: '4.80e-06' Biased in favor of strain: 'B73' |
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| GRMZM5G852886 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.850494 x 10-1 | 24 | 39 | 32 | 24 | 38.10% | 42.86% | 63 | 56 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0587817' χ2 p-value for Mo17 x B73: '.2850494' Biased in favor of strain: '' |
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| GRMZM5G852886 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 0 | 100.00% | 0.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM5G852833 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.551748 x 10-1 | 91 | 44 | 68 | 63 | 67.41% | 48.09% | 135 | 131 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8551748' χ2 p-value for Mo17 x B73: '6.48e-06' Biased in favor of strain: '' |
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| GRMZM5G852833 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.411286 x 10-1 | 86 | 49 | 68 | 55 | 63.70% | 44.72% | 135 | 123 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0014503' χ2 p-value for Mo17 x B73: '.2411286' Biased in favor of strain: '' |
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| GRMZM5G852801 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.698154 x 10-1 | 14 | 22 | 10 | 12 | 38.89% | 54.55% | 36 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1824224' χ2 p-value for Mo17 x B73: '.6698154' Biased in favor of strain: '' |
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| GRMZM5G852801 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.913014 x 10-1 | 17 | 5 | 3 | 15 | 77.27% | 83.33% | 22 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2913014' χ2 p-value for Mo17 x B73: '.1336145' Biased in favor of strain: '' |
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| GRMZM5G852776 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | PEG | 8.4 x 10-29 | 3 | 77 | 62 | 0 | 3.75% | 0.00% | 80 | 62 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.53e-33' χ2 p-value for Mo17 x B73: '8.42e-29' Biased in favor of strain: '' |
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| GRMZM5G852776 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.538369 x 10-1 | 25 | 32 | 60 | 33 | 43.86% | 35.48% | 57 | 93 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3538369' χ2 p-value for Mo17 x B73: '.0051139' Biased in favor of strain: '' |
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| GRMZM5G852704 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.971465 x 10-1 | 14 | 9 | 17 | 7 | 60.87% | 29.17% | 23 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2971465' χ2 p-value for Mo17 x B73: '.0412268' Biased in favor of strain: '' |
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| GRMZM5G852704 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 2 | 1 | 83.33% | 33.33% | 6 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.2206713' Biased in favor of strain: '' |
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| GRMZM5G852533 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 4.426 x 10-3 | 21 | 24 | 73 | 26 | 46.67% | 26.26% | 45 | 99 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.004426' χ2 p-value for Mo17 x B73: '1.49e-17' Biased in favor of strain: '' |
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| GRMZM5G852533 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.71 x 10-6 | 142 | 72 | 168 | 60 | 66.36% | 26.32% | 214 | 228 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.71e-06' χ2 p-value for Mo17 x B73: '8.52e-13' Biased in favor of strain: 'B73' |
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| GRMZM5G852502 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 20698 | 9330 | 21417 | 8992 | 68.93% | 29.57% | 30028 | 30409 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G852502 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 4242 | 883 | 2118 | 1693 | 82.77% | 44.42% | 5125 | 3811 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G852454 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 1 | 1 | 2 | 90.00% | 66.67% | 10 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1175272' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM5G852454 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 1 | 5 | 4 | 85.71% | 44.44% | 7 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0587817' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: '' |
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| GRMZM5G852396 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.04261 x 10-2 | 1244 | 1104 | 1403 | 1542 | 52.98% | 52.36% | 2348 | 2945 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0038621' χ2 p-value for Mo17 x B73: '.0104261' Biased in favor of strain: '' |
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| GRMZM5G852396 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.38 x 10-15 | 2396 | 653 | 1145 | 1703 | 78.58% | 59.80% | 3049 | 2848 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '7.38e-15' Biased in favor of strain: 'B73' |
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| GRMZM5G852378 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G852378 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.655179 x 10-1 | 9 | 4 | 5 | 12 | 69.23% | 70.59% | 13 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1655179' χ2 p-value for Mo17 x B73: '.0895551' Biased in favor of strain: '' |
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| GRMZM5G852338 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.333552 x 10-1 | 182 | 44 | 72 | 71 | 80.53% | 49.65% | 226 | 143 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.33e-20' χ2 p-value for Mo17 x B73: '.9333552' Biased in favor of strain: '' |
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| GRMZM5G852338 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1348 | 287 | 537 | 259 | 82.45% | 32.54% | 1635 | 796 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G852329 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 4 | 5 | 55.56% | 0 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G852329 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 9 | 0 | 100.00% | 0.00% | 2 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| GRMZM5G852177 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 12 | 0 | 3 | 0 | 100.00% | 0.00% | 12 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM5G852177 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G851965 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 12 | 0 | 4 | 0 | 100.00% | 0.00% | 12 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143062' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM5G851965 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 11 | 2 | 4 | 2 | 84.62% | 33.33% | 13 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0125549' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: '' |
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| GRMZM5G851929 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.862343 x 10-1 | 81 | 70 | 70 | 62 | 53.64% | 46.97% | 151 | 132 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3706976' χ2 p-value for Mo17 x B73: '.4862343' Biased in favor of strain: '' |
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| GRMZM5G851929 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.573062 x 10-1 | 28 | 8 | 17 | 15 | 77.78% | 46.88% | 36 | 32 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1573062' χ2 p-value for Mo17 x B73: '.0175489' Biased in favor of strain: '' |
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| GRMZM5G851914 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 9.6798 x 10-3 | 165 | 113 | 117 | 160 | 59.35% | 57.76% | 278 | 277 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0096798' χ2 p-value for Mo17 x B73: '.0016668' Biased in favor of strain: '' |
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| GRMZM5G851914 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.727801 x 10-1 | 67 | 72 | 79 | 77 | 48.20% | 49.36% | 139 | 156 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6714969' χ2 p-value for Mo17 x B73: '.8727801' Biased in favor of strain: '' |
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| GRMZM5G851862 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.482131 x 10-1 | 30 | 6 | 28 | 20 | 83.33% | 41.67% | 36 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.2482131' Biased in favor of strain: '' |
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| GRMZM5G851862 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.498326 x 10-1 | 54 | 20 | 35 | 52 | 72.97% | 59.77% | 74 | 87 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2498326' χ2 p-value for Mo17 x B73: '.1723861' Biased in favor of strain: '' |
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| GRMZM5G851815 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 1 | 3 | 0.00% | 75.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.7236737' Biased in favor of strain: '' |
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| GRMZM5G851815 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 2 | 5 | 3 | 71.43% | 37.50% | 7 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2568392' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM5G851807 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.78798 x 10-2 | 1041 | 804 | 907 | 828 | 56.42% | 47.72% | 1845 | 1735 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.44e-08' χ2 p-value for Mo17 x B73: '.0578798' Biased in favor of strain: '' |
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| GRMZM5G851807 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.77 x 10-8 | 892 | 906 | 684 | 1762 | 49.61% | 72.04% | 1798 | 2446 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.77e-08' Biased in favor of strain: 'Mo17' |
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| GRMZM5G851753 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G851753 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 1 | 0 | 0 | 80.00% | 5 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G851655 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.55807 x 10-2 | 29 | 14 | 13 | 23 | 67.44% | 63.89% | 43 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0221679' χ2 p-value for Mo17 x B73: '.0955807' Biased in favor of strain: '' |
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| GRMZM5G851655 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.8098 x 10-2 | 280 | 116 | 84 | 228 | 70.71% | 73.08% | 396 | 312 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.088098' χ2 p-value for Mo17 x B73: '.0163092' Biased in favor of strain: '' |
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| GRMZM5G851654 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.32 x 10-14 | 392 | 80 | 235 | 152 | 83.05% | 39.28% | 472 | 387 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.32e-14' χ2 p-value for Mo17 x B73: '2.95e-30' Biased in favor of strain: 'B73' |
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| GRMZM5G851654 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1393 | 441 | 1662 | 529 | 75.95% | 24.14% | 1834 | 2191 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM5G851617 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 4 | 8 | 1 | 55.56% | 11.11% | 9 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '.0196307' Biased in favor of strain: '' |
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| GRMZM5G851617 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.396554 x 10-1 | 26 | 7 | 12 | 8 | 78.79% | 40.00% | 33 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1396554' χ2 p-value for Mo17 x B73: '.011412' Biased in favor of strain: '' |
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| GRMZM5G851564 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 0 | 0 | 25.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G851564 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 3 | 1 | 25.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM5G851485 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.33153 x 10-1 | 322 | 285 | 294 | 238 | 53.05% | 44.74% | 607 | 532 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.133153' χ2 p-value for Mo17 x B73: '.0151862' Biased in favor of strain: '' |
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| GRMZM5G851485 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.39063 x 10-2 | 17 | 0 | 7 | 3 | 100.00% | 30.00% | 17 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0035516' χ2 p-value for Mo17 x B73: '.0139063' Biased in favor of strain: '' |
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| GRMZM5G851405 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.645 x 10-4 | 46 | 5 | 49 | 42 | 90.20% | 46.15% | 51 | 91 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003645' χ2 p-value for Mo17 x B73: '.0000331' Biased in favor of strain: 'B73' |
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| GRMZM5G851405 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.3 x 10-29 | 540 | 193 | 514 | 210 | 73.67% | 29.01% | 733 | 724 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.32e-37' χ2 p-value for Mo17 x B73: '1.34e-29' Biased in favor of strain: 'B73' |
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| GRMZM5G851403 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.115 x 10-4 | 24 | 0 | 13 | 0 | 100.00% | 0.00% | 24 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.63e-07' χ2 p-value for Mo17 x B73: '.0003115' Biased in favor of strain: 'B73' |
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| GRMZM5G851403 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.59 x 10-8 | 59 | 0 | 29 | 0 | 100.00% | 0.00% | 59 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.59e-08' χ2 p-value for Mo17 x B73: '2.62e-14' Biased in favor of strain: 'B73' |
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| GRMZM5G851266 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM5G851266 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 3 | 0 | 100.00% | 0.00% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM5G851207 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.393165 x 10-1 | 16 | 10 | 14 | 8 | 61.54% | 36.36% | 26 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2393165' χ2 p-value for Mo17 x B73: '.2008251' Biased in favor of strain: '' |
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| GRMZM5G851207 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.009941 x 10-1 | 17 | 3 | 16 | 21 | 85.00% | 56.76% | 20 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.081993' χ2 p-value for Mo17 x B73: '.2009941' Biased in favor of strain: '' |
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| GRMZM5G851103 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.33928 x 10-1 | 185 | 68 | 73 | 163 | 73.12% | 69.07% | 253 | 236 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0293876' χ2 p-value for Mo17 x B73: '.433928' Biased in favor of strain: '' |
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| GRMZM5G851103 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.109029 x 10-1 | 172 | 196 | 161 | 194 | 46.74% | 54.65% | 368 | 355 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2109029' χ2 p-value for Mo17 x B73: '.079867' Biased in favor of strain: '' |
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| GRMZM5G851051 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 4 | 0.00% | 100.00% | 1 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM5G851051 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.545492 x 10-1 | 16 | 5 | 6 | 4 | 76.19% | 40.00% | 21 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3545492' χ2 p-value for Mo17 x B73: '.0736382' Biased in favor of strain: '' |
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| GRMZM5G851032 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.6999 x 10-3 | 18 | 0 | 10 | 3 | 100.00% | 23.08% | 18 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0026999' χ2 p-value for Mo17 x B73: '.0008561' Biased in favor of strain: 'B73' |
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| GRMZM5G851032 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 9 | 3 | 5 | 1 | 75.00% | 16.67% | 12 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: '' |